Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g13113 Utricularia gibba HOM05D005471 ORTHO05D006170 2.8e-230 801.6 400 100.0
Migut.C00408 Erythranthe guttata HOM05D005471 ORTHO05D006170 5.9e-164 581.3 404 74.5
MSTRG.25028 Avicennia marina HOM05D005471 ORTHO05D006170 9.1e-157 557.4 405 72.1
SGA_v2.0_scaffold74G24542 Striga asiatica HOM05D005471 ORTHO05D006170 5.0e-155 551.6 408 71.8
Dinv44934 Davidia involucrata HOM05D005471 ORTHO05D006170 1.4e-144 516.9 398 65.8
GSVIVG01009307001 Vitis vinifera HOM05D005471 ORTHO05D006170 1.5e-143 513.5 405 65.9
Hma1.2p1_1170F.1_g263420 Hydrangea macrophylla HOM05D005471 ORTHO05D006170 7.5e-143 511.1 412 65.8
MELO3C010789.2 Cucumis melo HOM05D005471 ORTHO05D006170 3.1e-141 505.8 406 65.0
Solyc04g077560.3 Solanum lycopersicum HOM05D005471 ORTHO05D006170 7.0e-141 504.6 403 66.3
Cfa013748 Carpinus fangiana HOM05D005471 ORTHO05D006170 1.6e-140 503.4 418 63.9
Manes.18G048900 Manihot esculenta HOM05D005471 ORTHO05D006170 1.6e-140 503.4 406 66.0
Sopen04g031200 Solanum pennellii HOM05D005471 ORTHO05D006170 1.6e-140 503.4 403 66.0
Sc02g0008090 Simmondsia chinensis HOM05D005471 ORTHO05D006170 4.5e-140 501.9 406 65.3
PGSC0003DMG400004915 Solanum tuberosum HOM05D005471 ORTHO05D006170 1.0e-139 500.7 403 65.8
Manes.05G183100 Manihot esculenta HOM05D005471 ORTHO05D006170 8.5e-139 497.7 404 65.1
CiPaw.07G172600 Carya illinoinensis HOM05D005471 ORTHO05D006170 1.1e-138 497.3 417 63.1
Nn5g30656 Nelumbo nucifera HOM05D005471 ORTHO05D006170 1.9e-138 496.5 405 64.4
MD15G1065900 Malus domestica HOM05D005471 ORTHO05D006170 3.2e-138 495.7 407 64.6
Atru.chr13.864 Acer truncatum HOM05D005471 ORTHO05D006170 5.5e-138 495.0 401 65.1
FvH4_2g32730 Fragaria vesca HOM05D005471 ORTHO05D006170 1.6e-137 493.4 403 64.3
Gohir.D06G022300 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.6e-137 493.4 407 64.4
Gorai.010G026900 Gossypium raimondii HOM05D005471 ORTHO05D006170 1.6e-137 493.4 407 64.4
Cc10_g07570 Coffea canephora HOM05D005471 ORTHO05D006170 2.7e-137 492.7 406 64.3
HanXRQChr09g0254061 Helianthus annuus HOM05D005471 ORTHO05D006170 2.7e-137 492.7 404 64.6
Phvul.009G073700 Phaseolus vulgaris HOM05D005471 ORTHO05D006170 3.6e-137 492.3 405 63.7
CsaV3_2G025960 Cucumis sativus L. HOM05D005471 ORTHO05D006170 4.7e-137 491.9 403 63.8
HanXRQChr15g0493081 Helianthus annuus HOM05D005471 ORTHO05D006170 4.7e-137 491.9 408 63.7
Sed0019663 Sechium edule HOM05D005471 ORTHO05D006170 4.7e-137 491.9 395 64.8
FAN15G0642 Fragaria x ananassa HOM05D005471 ORTHO05D006170 8.0e-137 491.1 406 64.0
MD08G1078900 Malus domestica HOM05D005471 ORTHO05D006170 1.0e-136 490.7 407 63.6
Medtr3g103350 Medicago truncatula HOM05D005471 ORTHO05D006170 2.3e-136 489.6 405 64.0
TPR.G30210 Trifolium pratense HOM05D005471 ORTHO05D006170 3.0e-136 489.2 406 64.5
FAN20G2694 Fragaria x ananassa HOM05D005471 ORTHO05D006170 6.8e-136 488.0 406 64.0
Glyma.06G048400 Glycine max HOM05D005471 ORTHO05D006170 8.8e-136 487.6 405 63.7
Gohir.A06G025200 Gossypium hirsutum HOM05D005471 ORTHO05D006170 8.8e-136 487.6 405 64.0
Thecc.08G085200 Theobroma cacao HOM05D005471 ORTHO05D006170 1.2e-135 487.3 408 62.7
Ciclev10001411m.g Citrus clementina HOM05D005471 ORTHO05D006170 2.0e-135 486.5 403 63.3
Prupe.1G419800 Prunus persica HOM05D005471 ORTHO05D006170 3.4e-135 485.7 395 63.5
Lj1g0028245 Lotus japonicus HOM05D005471 ORTHO05D006170 4.4e-135 485.3 403 63.3
CSS0040686 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 2.8e-134 482.6 406 64.3
COL.COLO4_28470 Corchorus olitorius HOM05D005471 ORTHO05D006170 2.8e-134 482.6 397 64.5
FAN27G0342 Fragaria x ananassa HOM05D005471 ORTHO05D006170 1.1e-133 480.7 420 62.1
THA.LOC104819922 Tarenaya hassleriana HOM05D005471 ORTHO05D006170 1.8e-133 479.9 408 62.5
CARHR283850 Cardamine hirsuta HOM05D005471 ORTHO05D006170 4.1e-133 478.8 404 62.1
Lalb_Chr08g0245201 Lupinus albus HOM05D005471 ORTHO05D006170 4.1e-133 478.8 405 62.7
ClCG08G016670 Citrullus lanatus HOM05D005471 ORTHO05D006170 5.4e-133 478.4 399 62.7
TWI12G0997 Tripterygium wilfordii HOM05D005471 ORTHO05D006170 5.4e-133 478.4 406 63.8
CSS0014765 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 9.2e-133 477.6 403 63.3
Aqoxy6G02473 Aquilegia oxysepala HOM05D005471 ORTHO05D006170 1.6e-132 476.9 403 62.8
AT1G59520 Arabidopsis thaliana HOM05D005471 ORTHO05D006170 2.0e-132 476.5 404 61.6
RcHm_v2.0_Chr6g0309951 Rosa chinensis HOM05D005471 ORTHO05D006170 2.7e-132 476.1 404 62.4
BcaC09g49476 Brassica carinata HOM05D005471 ORTHO05D006170 4.5e-132 475.3 402 61.2
FAN24G0217 Fragaria x ananassa HOM05D005471 ORTHO05D006170 1.0e-131 474.2 398 63.8
Sp2g05030 Schrenkiella parvula HOM05D005471 ORTHO05D006170 1.7e-131 473.4 404 60.9
Dinv39207 Davidia involucrata HOM05D005471 ORTHO05D006170 2.3e-131 473.0 403 63.3
Psat5g045040 Pisum sativum HOM05D005471 ORTHO05D006170 2.3e-131 473.0 405 62.7
Eucgr.F02230 Eucalyptus grandis HOM05D005471 ORTHO05D006170 2.9e-131 472.6 406 61.1
ECA232G3342 Erigeron canadensis HOM05D005471 ORTHO05D006170 3.8e-131 472.2 406 62.3
Lalb_Chr11g0063001 Lupinus albus HOM05D005471 ORTHO05D006170 1.5e-130 470.3 405 62.2
Carub.0002s0591 Capsella rubella HOM05D005471 ORTHO05D006170 2.5e-130 469.5 404 60.4
CiPaw.08G051800 Carya illinoinensis HOM05D005471 ORTHO05D006170 2.5e-130 469.5 416 61.3
Gorai.009G221700 Gossypium raimondii HOM05D005471 ORTHO05D006170 3.3e-130 469.2 405 61.7
Gohir.D05G215000 Gossypium hirsutum HOM05D005471 ORTHO05D006170 4.3e-130 468.8 405 61.5
arahy.Tifrunner.gnm1.ann1.F72CPE Arachis hypogaea HOM05D005471 ORTHO05D006170 3.6e-129 465.7 404 61.1
Sabra14G0008300 Salix brachista HOM05D005471 ORTHO05D006170 1.4e-128 463.8 432 58.6
A01p28660 Brassica napus HOM05D005471 ORTHO05D006170 2.3e-128 463.0 401 60.6
C01p36310 Brassica napus HOM05D005471 ORTHO05D006170 3.0e-128 462.6 395 61.0
Ah.05g166980 Amaranthus hybridus HOM05D005471 ORTHO05D006170 8.9e-128 461.1 412 60.9
CSS0038926 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 1.5e-127 460.3 433 59.1
BolC1t03588H Brassica oleracea HOM05D005471 ORTHO05D006170 4.4e-127 458.8 406 59.6
BraA01t03038Z Brassica rapa HOM05D005471 ORTHO05D006170 9.8e-127 457.6 408 59.6
MBI16_g27035_MAGBIO Magnolia biondii HOM05D005471 ORTHO05D006170 6.4e-126 454.9 447 56.4
arahy.Tifrunner.gnm1.ann1.P8GEK4 Arachis hypogaea HOM05D005471 ORTHO05D006170 1.8e-125 453.4 430 57.4
Rhsim06G0064300 Rhododendron simsii HOM05D005471 ORTHO05D006170 2.7e-124 449.5 395 62.3
PSO170G6612 Papaver somniferum HOM05D005471 ORTHO05D006170 4.6e-124 448.7 397 62.2
PSO017G6379 Papaver somniferum HOM05D005471 ORTHO05D006170 7.8e-124 448.0 397 62.7
EL10Ac1g02354 Beta vulgaris HOM05D005471 ORTHO05D006170 8.6e-123 444.5 405 58.8
BcaC09g49477 Brassica carinata HOM05D005471 ORTHO05D006170 8.6e-123 444.5 394 60.2
CDE02G4131 Ceratophyllum demersum HOM05D005471 ORTHO05D006170 2.5e-122 443.0 410 59.0
Gohir.D06G026900 Gossypium hirsutum HOM05D005471 ORTHO05D006170 8.0e-121 438.0 368 64.7
VMungo1309G2773 Vigna mungo HOM05D005471 ORTHO05D006170 1.8e-120 436.8 409 58.2
ATR0739G016 Amborella trichopoda HOM05D005471 ORTHO05D006170 4.0e-120 435.6 403 58.8
PSO675G5405 Papaver somniferum HOM05D005471 ORTHO05D006170 5.2e-120 435.3 407 59.0
Thhalv10023553m.g Eutrema salsugineum HOM05D005471 ORTHO05D006170 6.8e-120 434.9 401 55.9
HPP92_007709 Vanilla planifolia HOM05D005471 ORTHO05D006170 2.6e-119 433.0 397 57.7
PSO541G0412 Papaver somniferum HOM05D005471 ORTHO05D006170 3.4e-119 432.6 407 58.5
Gohir.A05G211700 Gossypium hirsutum HOM05D005471 ORTHO05D006170 2.9e-118 429.5 402 57.2
Nitab4.5_0001426g0050 Nicotiana tabacum HOM05D005471 ORTHO05D006170 3.7e-118 429.1 440 55.0
Ca_15890_v3 Cicer arietinum L. HOM05D005471 ORTHO05D006170 8.3e-118 427.9 406 57.9
Aa31LG2G10610 Aethionema arabicum HOM05D005471 ORTHO05D006170 1.0e-115 421.0 412 55.1
Duzib093G1789 Durio zibethinus HOM05D005471 ORTHO05D006170 1.7e-115 420.2 405 56.5
TAR625G0189 Trochodendron aralioides HOM05D005471 ORTHO05D006170 2.0e-111 406.8 308 68.5
Nitab4.5_0002796g0080 Nicotiana tabacum HOM05D005471 ORTHO05D006170 9.8e-111 404.4 422 55.9
Glyma.04G047500 Glycine max HOM05D005471 ORTHO05D006170 6.4e-110 401.7 405 55.8
Os07g0248800 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 7.1e-109 398.3 398 56.0
Os10g0102900 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 7.1e-109 398.3 398 56.3
PGR031G3068 Punica granatum HOM05D005471 ORTHO05D006170 4.6e-108 395.6 403 52.4
Lsat_1_v5_gn_1_56140 Lactuca sativa HOM05D001400 ORTHO05D001795 1.5e-106 390.6 392 55.6
DCAR_019346 Daucus carota HOM05D005471 ORTHO05D006170 1.2e-105 387.5 404 54.2
Os04g0183100 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 6.2e-105 385.2 399 55.6
AUR62035006 Chenopodium quinoa HOM05D005471 ORTHO05D006170 4.0e-104 382.5 401 54.4
Lj4A753G30 Lonicera japonica HOM05D005471 ORTHO05D006170 8.9e-104 381.3 382 56.8
BcaB04g20211 Brassica carinata HOM05D005471 ORTHO05D006170 8.4e-102 374.8 404 51.2
Peaxi162Scf00340g00069 Petunia axillaris HOM05D005471 ORTHO05D006170 5.4e-101 372.1 446 51.3
Lsat_1_v5_gn_2_90520 Lactuca sativa HOM05D005471 ORTHO05D006170 1.2e-100 370.9 403 53.8
Zm00001eb025640 Zea mays HOM05D005471 ORTHO05D006170 6.6e-99 365.2 404 52.7
Potri.014G013500 Populus trichocarpa HOM05D005471 ORTHO05D006170 1.2e-92 344.4 278 63.3
Pp3c17_20680 Physcomitrium patens HOM05D005471 ORTHO05D006170 4.0e-88 329.3 394 49.2
Mapoly0067s0099 Marchantia polymorpha HOM05D005471 ORTHO05D006170 4.4e-87 325.9 408 48.0
Nitab4.5_0006888g0020 Nicotiana tabacum HOM05D005471 ORTHO05D006170 9.9e-87 324.7 434 46.3
AagrBONN_evm.TU.Sc2ySwM_368.1412 Anthoceros agrestis HOM05D005471 ORTHO05D006170 1.3e-81 307.8 399 45.4
Cpa.g.sc142.57 Carica papaya HOM05D005471 ORTHO05D006170 1.3e-81 307.8 309 54.0
SMO117G0302 Selaginella moellendorffii HOM05D005471 ORTHO05D006170 1.4e-77 294.3 388 44.8
QL12p038448 Quercus lobata HOM05D005471 ORTHO05D006170 3.5e-76 289.7 301 51.8
CBR_g49495 Chara braunii HOM05D005471 ORTHO05D006170 1.5e-71 274.2 434 40.1
vmacro21421 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 3.1e-64 250.0 289 51.9
DCAR_020058 Daucus carota HOM05D005471 ORTHO05D006170 1.8e-59 234.2 243 53.5
Haze_22399 Corylus avellana HOM05D005471 ORTHO05D006170 7.2e-53 212.2 334 43.4
vmacro21420 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 6.7e-51 205.7 145 74.5
Haze_22407 Corylus avellana HOM05D005471 ORTHO05D006170 9.7e-50 201.8 343 41.7
AUR62037460 Chenopodium quinoa HOM05D005471 ORTHO05D006170 3.7e-49 199.9 255 44.7
Psat5g037200 Pisum sativum HOM05D005471 ORTHO05D006170 1.4e-43 181.4 163 56.4
Gohir.D04G027975 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.0e-30 138.7 110 69.1
Gorai.012G030800 Gossypium raimondii HOM05D005471 ORTHO05D006170 2.9e-30 137.1 110 68.2
Gohir.D12G192766 Gossypium hirsutum HOM05D005471 ORTHO05D006170 6.5e-30 136.0 110 68.2
Gohir.A12G016250 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.2e-28 131.7 110 67.3
QL12p038454 Quercus lobata HOM05D005471 ORTHO05D006170 5.7e-26 122.9 117 59.0
DCAR_020059 Daucus carota HOM05D005471 ORTHO05D006170 1.1e-24 118.6 96 66.7
Cpa.g.sc142.58 Carica papaya HOM05D005471 ORTHO05D006170 1.4e-24 118.2 90 68.9
Peaxi162Scf00448g00027 Petunia axillaris HOM05D005471 ORTHO05D006170 1.5e-21 108.2 117 55.6
SHI08425 Sapria himalayana HOM05D005471 ORTHO05D006170 5.5e-21 106.3 131 45.0
Hund05280 Selenicereus undatus HOM05D005471 ORTHO05D006170 4.0e-19 100.1 107 46.7
Gorai.001G227100 Gossypium raimondii HOM05D005471 ORTHO05D006170 5.2e-19 99.8 66 74.2
SEGI_29276 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 1.1e-13 82.0 83 51.8
SEGI_08278 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 7.3e-13 79.3 116 39.7
Phvul.009G072300 Phaseolus vulgaris HOM05D005471 ORTHO05D000997 3.6e-12 77.0 85 45.9
Gohir.D11G128350 Gossypium hirsutum HOM05D005471 ORTHO05D006170 4.0e-11 73.6 50 68.0
Cre07.g320250 Chlamydomonas reinhardtii HOM05D005471 ORTHO05D006170 2.9e-09 67.4 346 24.9
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.4e-08 64.3 55 52.7
CAN.G213.23 Capsicum annuum HOM05D005471 ORTHO05D006170 9.2e-08 62.4 110 33.6


User provided reference genes

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