Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g13077 Utricularia gibba HOM05D003874 ORTHO05D030560 9.9e-64 246.5 116 100.0
Migut.C01383 Erythranthe guttata HOM05D003874 ORTHO05D004545 4.5e-24 114.8 116 54.3
MSTRG.22473 Avicennia marina HOM05D003874 ORTHO05D004545 1.0e-23 113.6 120 47.5
MSTRG.24132 Avicennia marina HOM05D003874 ORTHO05D004545 1.5e-19 99.8 100 52.0
SalBow1G3841 Salvia bowleyana HOM05D003874 ORTHO05D004545 1.5e-19 99.8 91 57.1
MSTRG.1601 Avicennia marina HOM05D003874 ORTHO05D004545 9.7e-19 97.1 113 47.8
SGA_v2.0_scaffold118G32614 Striga asiatica HOM05D003874 ORTHO05D004545 4.8e-18 94.7 104 45.2
SalBow6G4185 Salvia bowleyana HOM05D003874 ORTHO05D004545 8.3e-18 94.0 91 53.8
SGA_v2.0_scaffold24G10651 Striga asiatica HOM05D003874 ORTHO05D004545 1.4e-17 93.2 96 49.0
Oeu028635.2 Olea europaea HOM05D003874 ORTHO05D004545 4.1e-17 91.7 100 45.0
SalBow7G3598 Salvia bowleyana HOM05D003874 ORTHO05D004545 4.5e-16 88.2 112 45.5
Oeu013912.1 Olea europaea HOM05D003874 ORTHO05D004545 4.2e-14 81.6 104 46.2
SalBow2G2594 Salvia bowleyana HOM05D033584 ORTHO05D030560 1.8e-12 76.3 101 43.6
Potri.013G099200 Populus trichocarpa HOM05D003874 ORTHO05D004545 2.0e-11 72.8 109 42.2
Nitab4.5_0000980g0270 Nicotiana tabacum HOM05D003874 ORTHO05D004545 1.3e-10 70.1 131 35.1
Peaxi162Scf00078g00734 Petunia axillaris HOM05D003874 ORTHO05D004545 2.8e-10 68.9 118 38.1
SalBow8G3890 Salvia bowleyana HOM05D033584 ORTHO05D030560 3.7e-10 68.6 98 41.8
Sabra13G0083800 Salix brachista HOM05D003874 ORTHO05D004545 8.3e-10 67.4 108 40.7
Sabra13G0085100 Salix brachista HOM05D003874 ORTHO05D004545 8.3e-10 67.4 108 40.7
Atru.chr13.2495 Acer truncatum HOM05D003874 ORTHO05D004545 1.8e-09 66.2 113 38.1
Atru.chr13.2507 Acer truncatum HOM05D003874 ORTHO05D004545 1.2e-08 63.5 113 37.2
Dinv37410 Davidia involucrata HOM05D003874 ORTHO05D004545 1.2e-08 63.5 128 32.0
CSS0009242 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 1.6e-08 63.2 122 32.0
CSS0015095 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 1.6e-08 63.2 122 32.0
Ciclev10020185m.g Citrus clementina HOM05D003874 ORTHO05D004545 1.6e-08 63.2 108 38.0
Duzib177G0949 Durio zibethinus HOM05D003874 ORTHO05D004545 1.6e-08 63.2 103 38.8
Manes.02G201800 Manihot esculenta HOM05D003874 ORTHO05D004545 1.6e-08 63.2 112 36.6
Dinv22112 Davidia involucrata HOM05D003874 ORTHO05D004545 3.5e-08 62.0 126 33.3
Potri.019G071300 Populus trichocarpa HOM05D003874 ORTHO05D004545 4.5e-08 61.6 110 38.2
THA.LOC104821626 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 4.5e-08 61.6 106 38.7
Actinidia29373 Actinidia chinensis HOM05D003874 ORTHO05D004545 1.3e-07 60.1 102 36.3
Duzib268G0037 Durio zibethinus HOM05D003874 ORTHO05D004545 1.3e-07 60.1 119 33.6
Cpa.g.sc21.87 Carica papaya HOM05D003874 ORTHO05D004545 2.9e-07 58.9 106 39.6
Manes.18G116100 Manihot esculenta HOM05D003874 ORTHO05D004545 2.9e-07 58.9 110 36.4
Thecc.08G178800 Theobroma cacao HOM05D003874 ORTHO05D004545 2.9e-07 58.9 101 38.6
Hma1.2p1_0016F.1_g010740 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 3.8e-07 58.5 118 36.4
Hma1.2p1_0016F.1_g010745 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 3.8e-07 58.5 118 36.4
PGSC0003DMG400012413 Solanum tuberosum HOM05D003874 ORTHO05D004545 5.0e-07 58.2 105 37.1
Prupe.8G006800 Prunus persica HOM05D003874 ORTHO05D004545 6.6e-07 57.8 107 37.4
TWI18G0284 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 6.6e-07 57.8 122 33.6
PGR042G0135 Punica granatum HOM05D003874 ORTHO05D004545 8.6e-07 57.4 98 33.7
CiPaw.04G009100 Carya illinoinensis HOM05D003874 ORTHO05D004545 1.1e-06 57.0 94 38.3
FvH4_2g00770 Fragaria vesca HOM05D003874 ORTHO05D004545 1.5e-06 56.6 96 38.5
FAN20G2080 Fragaria x ananassa HOM05D003874 ORTHO05D004545 1.5e-06 56.6 96 38.5
FAN24G1984 Fragaria x ananassa HOM05D003874 ORTHO05D004545 1.5e-06 56.6 96 38.5
Sopen07g031240 Solanum pennellii HOM05D003874 ORTHO05D004545 1.5e-06 56.6 103 36.9
CiPaw.03G014100 Carya illinoinensis HOM05D003874 ORTHO05D004545 1.9e-06 56.2 113 34.5
MD10G1004400 Malus domestica HOM05D003874 ORTHO05D004545 1.9e-06 56.2 107 37.4
Sc21g0007200 Simmondsia chinensis HOM05D003874 ORTHO05D004545 1.9e-06 56.2 114 34.2
THA.LOC104808737 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 1.9e-06 56.2 106 34.0
Actinidia03528 Actinidia chinensis HOM05D003874 ORTHO05D004545 2.5e-06 55.8 100 36.0
CDE08G0633 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 2.5e-06 55.8 108 35.2
RcHm_v2.0_Chr6g0251151 Rosa chinensis HOM05D003874 ORTHO05D004545 2.5e-06 55.8 99 38.4
CDE02G0043 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 3.3e-06 55.5 105 35.2
ClCG08G000760 Citrullus lanatus HOM05D003874 ORTHO05D004545 4.2e-06 55.1 120 32.5
COL.COLO4_25146 Corchorus olitorius HOM05D003874 ORTHO05D004545 4.2e-06 55.1 103 36.9
QL09p001799 Quercus lobata HOM05D003874 ORTHO05D004545 7.2e-06 54.3 108 32.4


User provided reference genes

Program Settings