Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 1.3e-48 196.1 98 100.0
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.1e-36 156.4 98 78.6
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 2.0e-36 155.6 96 78.1
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 3.3e-36 154.8 91 78.0
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 3.3e-36 154.8 97 74.2
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 7.4e-36 153.7 97 76.3
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 1.3e-35 152.9 91 76.9
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 3.7e-35 151.4 97 75.3
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 3.7e-35 151.4 97 73.2
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 4.8e-35 151.0 97 74.2
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 6.3e-35 150.6 96 74.0
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 8.2e-35 150.2 97 75.3
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 1.8e-34 149.1 97 69.1
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 1.8e-34 149.1 97 71.1
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 4.1e-34 147.9 94 72.3
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 4.1e-34 147.9 96 70.8
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 4.1e-34 147.9 95 74.7
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 6.9e-34 147.1 91 74.7
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 9.1e-34 146.7 98 67.3
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 9.1e-34 146.7 91 75.8
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 1.2e-33 146.4 96 71.9
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 1.2e-33 146.4 97 71.1
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 1.2e-33 146.4 97 71.1
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 1.2e-33 146.4 96 69.8
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 1.5e-33 146.0 94 75.5
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 1.5e-33 146.0 99 69.7
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 2.0e-33 145.6 97 70.1
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 2.6e-33 145.2 99 68.7
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.6e-33 145.2 99 68.7
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.6e-33 145.2 99 68.7
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 2.6e-33 145.2 92 71.7
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 3.4e-33 144.8 97 71.1
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 3.4e-33 144.8 95 71.6
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 5.9e-33 144.1 96 70.8
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 7.7e-33 143.7 90 76.7
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 7.7e-33 143.7 97 71.1
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.0e-32 143.3 90 75.6
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.3e-32 142.9 97 70.1
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 1.3e-32 142.9 91 74.7
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 1.3e-32 142.9 97 68.0
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.3e-32 142.9 97 71.1
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 1.3e-32 142.9 97 70.1
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 1.7e-32 142.5 96 71.9
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.2e-32 142.1 99 67.7
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 3.8e-32 141.4 95 67.4
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 6.5e-32 140.6 90 71.1
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 1.1e-31 139.8 94 69.1
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 1.4e-31 139.4 100 68.0
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 1.9e-31 139.0 98 68.4
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 1.9e-31 139.0 91 71.4
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 2.5e-31 138.7 97 70.1
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 4.2e-31 137.9 98 69.4
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 4.2e-31 137.9 97 68.0
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 9.4e-31 136.7 88 69.3
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 1.6e-30 136.0 93 67.7
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 2.1e-30 135.6 97 67.0
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 2.7e-30 135.2 91 69.2
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.7e-30 135.2 98 66.3
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.7e-30 135.2 98 66.3
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 2.7e-30 135.2 98 66.3
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 3.6e-30 134.8 121 59.5
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 3.6e-30 134.8 95 68.4
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 3.6e-30 134.8 96 66.7
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 4.7e-30 134.4 88 68.2
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 6.1e-30 134.0 99 65.7
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 7.9e-30 133.7 91 69.2
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 7.9e-30 133.7 96 64.6
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.4e-29 132.9 91 65.9
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 1.4e-29 132.9 96 65.6
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 2.3e-29 132.1 96 64.6
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 2.3e-29 132.1 97 69.1
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 3.0e-29 131.7 91 67.0
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 3.0e-29 131.7 101 63.4
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 3.0e-29 131.7 95 65.3
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 6.7e-29 130.6 81 75.3
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 8.8e-29 130.2 93 65.6
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 1.1e-28 129.8 90 68.9
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 1.5e-28 129.4 91 63.7
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 2.6e-28 128.6 93 68.8
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 3.3e-28 128.3 97 62.9
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 3.3e-28 128.3 81 75.3
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 7.4e-28 127.1 91 64.8
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 1.3e-27 126.3 102 62.7
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 2.8e-27 125.2 90 70.0
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 2.8e-27 125.2 80 75.0
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 4.8e-27 124.4 91 64.8
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 6.3e-27 124.0 91 64.8
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 8.2e-27 123.6 94 62.8
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 1.4e-26 122.9 91 63.7
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 1.4e-26 122.9 91 63.7
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 1.4e-26 122.9 91 63.7
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 1.4e-26 122.9 91 63.7
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 3.1e-26 121.7 81 70.4
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 4.1e-26 121.3 88 62.5
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 4.1e-26 121.3 94 62.8
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 5.3e-26 120.9 91 62.6
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 1.2e-25 119.8 91 62.6
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 1.2e-25 119.8 91 62.6
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.5e-25 119.4 91 61.5
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 4.5e-25 117.9 91 61.5
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 7.7e-25 117.1 72 76.4
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 1.3e-24 116.3 91 60.4
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 3.8e-24 114.8 87 65.5
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 6.5e-24 114.0 85 62.4
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 8.8e-21 103.6 102 56.9
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 2.6e-20 102.1 64 73.4
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 4.4e-20 101.3 84 59.5
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 7.7e-17 90.5 83 57.8
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 3.8e-16 88.2 73 57.5
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 6.5e-16 87.4 85 51.8
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 3.0e-13 78.6 108 44.4
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 6.8e-13 77.4 93 44.1
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.2e-12 76.6 63 65.1
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.5e-12 76.3 45 77.8
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 2.4e-10 68.9 85 42.4
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 4.1e-10 68.2 78 46.2
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 9.1e-10 67.0 38 78.9
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 1.6e-09 66.2 41 68.3
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 2.1e-06 55.8 58 50.0


User provided reference genes

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