Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 2.5e-53 211.8 108 100.0
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 2.6e-26 122.1 121 57.0
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 7.9e-23 110.5 127 50.4
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 1.1e-21 106.7 92 63.0
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 2.2e-20 102.4 105 54.3
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 2.8e-20 102.1 106 52.8
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 2.8e-20 102.1 109 54.1
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 3.7e-20 101.7 107 54.2
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 8.2e-20 100.5 107 50.5
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 8.2e-20 100.5 103 50.5
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 1.1e-19 100.1 104 50.0
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 1.4e-19 99.8 87 58.6
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 1.4e-19 99.8 105 54.3
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 3.1e-19 98.6 112 47.3
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 4.1e-19 98.2 107 52.3
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 9.1e-19 97.1 113 46.0
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 1.5e-18 96.3 88 55.7
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 2.0e-18 95.9 103 49.5
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 2.6e-18 95.5 103 52.4
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 4.5e-18 94.7 103 51.5
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 5.9e-18 94.4 105 50.5
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 5.9e-18 94.4 100 48.0
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 7.7e-18 94.0 99 52.5
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 7.7e-18 94.0 100 48.0
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 1.3e-17 93.2 89 53.9
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 1.7e-17 92.8 83 55.4
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 1.7e-17 92.8 98 48.0
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 1.7e-17 92.8 98 48.0
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 2.2e-17 92.4 109 46.8
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 2.9e-17 92.0 83 54.2
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 2.9e-17 92.0 98 46.9
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 2.9e-17 92.0 105 49.5
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 3.8e-17 91.7 81 60.5
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 3.8e-17 91.7 83 55.4
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 3.8e-17 91.7 111 47.7
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 8.5e-17 90.5 103 43.7
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 8.5e-17 90.5 111 47.7
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 1.1e-16 90.1 82 57.3
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 1.1e-16 90.1 100 46.0
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 1.1e-16 90.1 84 53.6
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 1.4e-16 89.7 107 48.6
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 1.9e-16 89.4 103 49.5
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 2.5e-16 89.0 107 46.7
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 2.5e-16 89.0 107 46.7
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 3.2e-16 88.6 107 45.8
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 4.2e-16 88.2 81 51.9
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 4.2e-16 88.2 98 46.9
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 5.5e-16 87.8 106 48.1
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 5.5e-16 87.8 107 44.9
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 7.2e-16 87.4 107 46.7
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 7.2e-16 87.4 107 46.7
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 7.2e-16 87.4 82 54.9
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 7.2e-16 87.4 81 51.9
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 7.2e-16 87.4 112 49.1
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 9.4e-16 87.0 81 53.1
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 1.2e-15 86.7 107 45.8
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 1.2e-15 86.7 94 51.1
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 1.2e-15 86.7 94 51.1
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 1.2e-15 86.7 87 48.3
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 1.6e-15 86.3 88 50.0
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 1.6e-15 86.3 105 45.7
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 1.6e-15 86.3 105 45.7
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 1.6e-15 86.3 107 48.6
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 2.1e-15 85.9 108 47.2
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 2.1e-15 85.9 87 52.9
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 2.7e-15 85.5 79 53.2
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 2.7e-15 85.5 113 41.6
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 2.7e-15 85.5 113 42.5
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 2.7e-15 85.5 110 48.2
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 3.6e-15 85.1 108 47.2
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 3.6e-15 85.1 105 45.7
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 6.1e-15 84.3 81 50.6
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 8.0e-15 84.0 82 50.0
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 1.0e-14 83.6 107 48.6
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.4e-14 83.2 81 48.1
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 1.4e-14 83.2 80 51.2
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 1.8e-14 82.8 87 48.3
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 1.8e-14 82.8 104 42.3
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 1.8e-14 82.8 111 45.9
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 3.0e-14 82.0 87 48.3
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 3.9e-14 81.6 88 46.6
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 3.9e-14 81.6 79 51.9
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 6.7e-14 80.9 101 44.6
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 1.5e-13 79.7 105 42.9
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 3.3e-13 78.6 109 41.3
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 4.4e-13 78.2 93 43.0
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 7.4e-13 77.4 94 42.6
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 6.3e-12 74.3 105 41.0
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 6.3e-12 74.3 105 41.0
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.8e-11 72.8 75 49.3
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 1.8e-11 72.8 97 43.3
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 2.4e-11 72.4 108 41.7
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 4.1e-11 71.6 105 40.0
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 7.0e-11 70.9 75 48.0
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 9.1e-11 70.5 75 48.0
SGA_v2.0_scaffold52G18969 Striga asiatica HOM05D007246 ORTHO05D009066 1.6e-10 69.7 110 40.0
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 2.6e-10 68.9 75 46.7
Carub.0007s3396 Capsella rubella HOM05D007246 ORTHO05D009066 2.2e-09 65.9 105 42.9
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 1.6e-07 59.7 107 37.4
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 6.1e-07 57.8 60 46.7
CARHR037830 Cardamine hirsuta HOM05D007246 ORTHO05D009066 1.4e-06 56.6 61 44.3
SEGI_11751 Sequoiadendron giganteum HOM05D007246 ORTHO05D009066 5.2e-06 54.7 99 32.3


User provided reference genes

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