Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 0.0e+00 1280.4 688 100.0
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 7.1e-109 399.1 754 42.2
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 3.8e-102 376.7 765 40.0
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 1.1e-98 365.2 801 37.5
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 2.5e-85 320.9 756 36.1
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 9.4e-77 292.4 779 35.4
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 2.3e-75 287.7 780 35.5
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 6.7e-75 286.2 802 35.7
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 8.8e-75 285.8 568 39.1
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 4.4e-74 283.5 680 35.7
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 9.7e-74 282.3 755 34.4
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 9.7e-74 282.3 667 35.8
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 2.4e-72 277.7 702 35.2
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 3.5e-71 273.9 736 35.3
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 3.5e-71 273.9 762 33.9
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 1.9e-69 268.1 566 37.6
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 4.2e-69 266.9 735 33.9
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 7.2e-69 266.2 753 35.3
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 4.7e-68 263.5 582 38.1
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 3.9e-67 260.4 574 38.2
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 5.2e-67 260.0 679 35.8
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 1.5e-66 258.5 791 32.9
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 2.0e-66 258.1 672 34.7
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 2.0e-66 258.1 763 34.3
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 3.3e-66 257.3 586 37.9
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 5.7e-66 256.5 763 32.6
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 5.9e-63 246.5 738 32.7
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 6.5e-62 243.0 760 33.0
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 1.9e-61 241.5 750 32.3
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 2.5e-61 241.1 770 31.6
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 9.4e-61 239.2 770 31.6
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 1.2e-60 238.8 690 33.9
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 1.6e-60 238.4 548 38.1
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 1.6e-60 238.4 505 38.0
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 4.7e-60 236.9 792 30.9
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 6.1e-60 236.5 792 32.7
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 1.4e-59 235.3 799 31.4
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 3.0e-59 234.2 589 34.6
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 4.0e-59 233.8 512 37.1
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 8.8e-59 232.6 550 35.8
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 8.8e-59 232.6 758 31.7
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 1.5e-58 231.9 692 33.8
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 2.0e-58 231.5 773 31.3
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 2.0e-58 231.5 754 32.6
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 4.4e-58 230.3 656 33.8
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 5.7e-58 229.9 580 36.9
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 9.7e-58 229.2 513 37.8
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 6.3e-57 226.5 563 35.5
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 6.3e-57 226.5 760 32.0
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 2.4e-56 224.6 604 35.4
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 3.1e-56 224.2 798 30.1
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 5.3e-56 223.4 744 31.7
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 5.3e-56 223.4 731 32.7
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 7.0e-56 223.0 603 35.2
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 7.0e-56 223.0 813 30.4
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 1.6e-55 221.9 550 34.4
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 3.5e-55 220.7 581 35.5
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 4.5e-55 220.3 565 36.1
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 2.2e-54 218.0 583 35.8
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 2.2e-54 218.0 580 34.8
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 3.8e-54 217.2 759 31.9
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 3.8e-54 217.2 569 34.8
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 8.5e-54 216.1 775 32.6
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 1.2e-52 212.2 622 33.0
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 6.1e-52 209.9 775 31.1
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 1.0e-51 209.1 561 34.8
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 1.0e-51 209.1 670 32.5
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 1.5e-50 205.3 513 35.9
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 3.7e-49 200.7 560 35.9
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 8.3e-49 199.5 575 33.6
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 1.6e-47 195.3 553 35.3
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 1.6e-47 195.3 600 34.2
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 1.3e-46 192.2 587 34.8
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 1.9e-45 188.3 552 35.7
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 9.5e-45 186.0 405 37.5
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 9.5e-45 186.0 572 34.6
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 1.5e-42 178.7 671 30.7
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 1.4e-40 172.2 634 32.3
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 3.2e-40 171.0 605 31.9
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 1.2e-39 169.1 540 32.2
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 1.2e-39 169.1 540 32.2
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 1.7e-38 165.2 622 32.0
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 1.9e-37 161.8 579 31.8
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 2.5e-37 161.4 695 32.1
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 1.2e-36 159.1 282 41.1
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 1.6e-36 158.7 579 32.0
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 3.6e-36 157.5 621 30.3
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 1.0e-35 156.0 714 26.8
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 1.5e-34 152.1 639 30.8
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 7.5e-34 149.8 691 27.8
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 9.8e-34 149.4 598 30.1
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 1.3e-33 149.1 714 28.9
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 2.2e-33 148.3 553 32.4
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 6.4e-33 146.7 626 30.7
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 6.4e-33 146.7 626 30.7
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 1.9e-32 145.2 587 31.3
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 3.9e-30 137.5 571 30.8
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 1.5e-29 135.6 598 31.4
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 2.5e-29 134.8 397 33.2
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 3.6e-28 131.0 324 36.1
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 7.8e-23 113.2 583 28.3
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 1.7e-22 112.1 691 26.5
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.1e-21 109.4 488 27.0
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 2.8e-20 104.8 217 35.0
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 1.8e-19 102.1 569 28.5
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 8.9e-19 99.8 402 28.9
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 9.9e-18 96.3 208 35.1
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 2.2e-17 95.1 589 26.3
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 2.2e-17 95.1 598 25.8
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 2.2e-17 95.1 598 25.8
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 8.1e-12 76.6 613 24.6
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 2.0e-10 72.0 196 35.2
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 5.8e-10 70.5 72 58.3
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.9e-08 65.5 173 35.8
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 2.1e-07 62.0 152 38.2
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 2.7e-07 61.6 185 33.0
AagrBONN_evm.TU.Sc2ySwM_362.1405 Anthoceros agrestis HOM05D051179 ORTHO05D038399 3.9e-06 57.8 49 61.2


User provided reference genes

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