Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 2.8e-207 725.3 443 100.0
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 5.6e-131 471.9 303 77.9
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 9.8e-128 461.1 306 77.1
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 1.9e-126 456.8 312 74.7
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 8.6e-124 448.0 313 72.5
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 9.5e-123 444.5 309 71.5
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 1.2e-122 444.1 306 73.2
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 2.3e-121 439.9 318 71.4
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 2.3e-121 439.9 307 71.0
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 3.1e-121 439.5 308 72.1
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 5.2e-121 438.7 355 65.6
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 1.5e-120 437.2 312 69.6
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 2.0e-120 436.8 308 71.8
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 5.8e-120 435.3 311 71.7
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 5.8e-120 435.3 316 71.2
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 5.8e-120 435.3 313 69.3
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 7.5e-120 434.9 311 68.8
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 2.2e-119 433.3 309 71.2
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 2.2e-119 433.3 316 70.9
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 2.9e-119 433.0 301 70.4
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 2.9e-119 433.0 313 69.3
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 4.9e-119 432.2 311 69.1
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 4.9e-119 432.2 316 70.6
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 1.4e-118 430.6 315 71.1
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 1.9e-118 430.3 311 70.7
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 1.9e-118 430.3 313 70.3
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 2.4e-118 429.9 311 68.5
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 3.2e-118 429.5 317 69.1
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 4.1e-118 429.1 306 71.6
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 4.1e-118 429.1 319 68.7
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 5.4e-118 428.7 315 68.9
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 7.1e-118 428.3 321 67.6
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 7.1e-118 428.3 321 67.6
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 7.1e-118 428.3 314 68.5
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 9.2e-118 427.9 309 71.2
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 1.2e-117 427.6 318 68.9
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 1.2e-117 427.6 311 70.1
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 2.7e-117 426.4 316 71.2
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 3.5e-117 426.0 320 67.5
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 4.6e-117 425.6 309 70.6
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 7.8e-117 424.9 307 69.1
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 3.0e-116 422.9 313 68.7
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 3.0e-116 422.9 320 68.4
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 8.6e-116 421.4 316 68.4
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 2.5e-115 419.9 311 68.5
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 7.3e-115 418.3 308 66.6
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 7.3e-115 418.3 315 67.9
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.2e-114 417.5 310 68.7
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 1.6e-114 417.2 301 71.4
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 2.1e-114 416.8 312 67.6
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 8.1e-114 414.8 311 69.1
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 1.1e-113 414.5 298 70.1
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 1.4e-113 414.1 317 67.8
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 1.4e-113 414.1 317 67.8
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 1.4e-113 414.1 317 66.2
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 1.8e-113 413.7 317 67.8
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 1.8e-113 413.7 311 68.2
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 3.1e-113 412.9 321 66.7
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 4.0e-113 412.5 320 66.9
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 4.0e-113 412.5 303 68.3
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 4.0e-113 412.5 305 70.8
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 4.0e-113 412.5 314 67.2
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 5.2e-113 412.1 333 65.8
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 5.2e-113 412.1 320 66.6
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 1.2e-112 411.0 318 67.3
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 1.5e-112 410.6 316 67.1
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 2.0e-112 410.2 317 67.2
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 4.4e-112 409.1 299 69.6
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 7.6e-112 408.3 301 67.8
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 2.9e-111 406.4 330 63.6
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 2.9e-111 406.4 319 65.8
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 2.9e-111 406.4 302 68.9
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 8.3e-111 404.8 317 65.0
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 8.3e-111 404.8 320 65.9
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 1.2e-109 401.0 310 65.8
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 1.3e-108 397.5 311 67.5
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 1.1e-107 394.4 315 63.8
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 5.6e-107 392.1 306 65.0
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 7.3e-107 391.7 332 64.8
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 2.1e-106 390.2 311 65.9
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 4.7e-106 389.0 306 65.0
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 4.0e-105 386.0 318 64.8
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 4.0e-105 386.0 346 61.8
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 2.0e-104 383.6 329 63.8
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 7.1e-102 375.2 320 62.8
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 5.1e-100 369.0 274 70.8
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 7.3e-99 365.2 388 53.1
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 4.9e-95 352.4 264 69.3
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 1.1e-94 351.3 305 61.3
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 4.6e-93 345.9 253 69.6
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 4.6e-93 345.9 281 61.9
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 1.9e-91 340.5 292 61.3
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 1.8e-89 334.0 550 40.0
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 4.5e-80 302.8 290 54.8
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 3.8e-79 299.7 218 69.7
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 6.2e-74 282.3 220 64.5
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 1.1e-73 281.6 217 65.9
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 3.8e-63 246.5 185 69.2
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 1.5e-59 234.6 305 45.9
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 5.7e-59 232.6 181 67.4
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 1.2e-48 198.4 145 67.6
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 1.5e-46 191.4 149 64.4
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 1.6e-45 188.0 178 58.4
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 5.9e-40 169.5 278 35.6
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 9.8e-27 125.6 91 70.3
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 3.7e-26 123.6 92 68.5
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 1.4e-25 121.7 91 69.2
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 2.7e-24 117.5 193 43.0
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 3.8e-23 113.6 69 73.9
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 5.0e-23 113.2 87 65.5
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 1.8e-17 94.7 115 50.4
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 3.9e-15 87.0 60 65.0
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 4.3e-14 83.6 67 67.2
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 9.5e-14 82.4 114 38.6
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.1e-13 81.3 62 64.5
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 3.6e-13 80.5 62 64.5
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.5e-11 75.1 53 66.0
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.2e-10 71.2 62 61.3
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 1.4e-09 68.6 38 76.3
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 4.1e-09 67.0 39 79.5
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 9.2e-09 65.9 50 60.0
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 2.0e-08 64.7 50 60.0


User provided reference genes

Program Settings