Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 8.0e-216 753.4 372 100.0
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 3.7e-136 488.8 400 64.2
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 1.7e-133 479.9 383 64.8
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 5.0e-133 478.4 390 63.3
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 3.2e-132 475.7 381 64.3
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 1.4e-130 470.3 403 60.8
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 1.8e-130 469.9 392 62.5
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 1.7e-128 463.4 381 62.7
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 3.7e-128 462.2 381 62.2
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 4.1e-127 458.8 376 63.0
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 1.2e-126 457.2 326 67.5
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.0e-125 454.1 359 63.2
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 1.3e-125 453.8 323 70.0
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 7.2e-124 448.0 387 59.2
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 7.2e-124 448.0 392 59.7
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 1.2e-123 447.2 395 60.3
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 1.6e-123 446.8 324 67.6
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 2.1e-123 446.4 399 58.9
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 2.7e-123 446.0 323 68.1
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 3.6e-123 445.7 397 57.4
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 4.7e-123 445.3 325 67.1
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 8.0e-123 444.5 323 65.9
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 8.0e-123 444.5 386 60.1
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 8.0e-123 444.5 393 59.3
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 1.0e-122 444.1 377 61.0
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.4e-122 443.7 333 66.7
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.4e-122 443.7 333 66.7
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 1.4e-122 443.7 401 57.6
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.4e-122 443.7 404 56.9
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 2.3e-122 443.0 326 67.2
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 3.0e-122 442.6 396 59.3
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 4.0e-122 442.2 330 66.1
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 5.2e-122 441.8 323 65.9
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 5.2e-122 441.8 390 59.0
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 5.2e-122 441.8 340 64.4
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 6.8e-122 441.4 401 59.1
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 8.8e-122 441.0 381 59.6
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 8.8e-122 441.0 338 67.2
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 1.5e-121 440.3 341 64.8
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 2.0e-121 439.9 395 59.7
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 2.6e-121 439.5 392 57.9
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 3.4e-121 439.1 351 63.0
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 4.4e-121 438.7 392 58.4
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 9.8e-121 437.6 391 56.8
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 9.8e-121 437.6 330 65.2
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.7e-120 436.8 323 65.3
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 1.7e-120 436.8 323 65.6
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 1.7e-120 436.8 397 57.4
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 2.2e-120 436.4 391 58.3
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 6.3e-120 434.9 334 63.5
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 6.3e-120 434.9 379 61.2
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 8.3e-120 434.5 394 58.9
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 1.4e-119 433.7 326 65.0
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 1.4e-119 433.7 401 57.4
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.8e-119 433.3 338 62.7
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.8e-119 433.3 323 65.3
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 1.8e-119 433.3 392 57.9
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 2.4e-119 433.0 388 58.2
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 3.1e-119 432.6 393 58.3
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 3.1e-119 432.6 405 57.8
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 1.2e-118 430.6 382 59.2
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 1.2e-118 430.6 392 56.6
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 3.5e-118 429.1 308 67.2
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 5.9e-118 428.3 400 58.0
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 1.7e-117 426.8 398 57.8
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 2.2e-117 426.4 402 57.2
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 2.9e-117 426.0 308 65.3
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 2.9e-117 426.0 315 64.8
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 2.9e-117 426.0 400 56.8
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 5.0e-117 425.2 376 58.2
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 5.0e-117 425.2 398 56.5
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 6.5e-117 424.9 316 64.2
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 6.5e-117 424.9 310 64.5
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 6.5e-117 424.9 376 58.2
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 6.5e-117 424.9 376 58.2
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 6.5e-117 424.9 310 64.5
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 1.5e-116 423.7 400 56.8
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 2.5e-116 422.9 399 56.6
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 3.2e-116 422.5 316 63.3
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.2e-115 420.6 311 65.9
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 3.6e-115 419.1 337 60.2
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 3.6e-115 419.1 323 61.9
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 1.8e-114 416.8 377 56.0
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 2.3e-114 416.4 335 60.3
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 6.8e-114 414.8 369 58.5
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 8.8e-114 414.5 387 57.6
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 1.2e-113 414.1 390 55.9
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 1.2e-113 414.1 328 62.2
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 3.7e-112 409.1 381 54.6
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 5.9e-110 401.7 383 55.4
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 9.5e-108 394.4 397 55.2
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 9.5e-108 394.4 398 52.0
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 2.1e-107 393.3 434 49.3
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 6.8e-106 388.3 293 62.5
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 1.2e-105 387.5 343 55.7
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 3.7e-104 382.5 312 61.5
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 4.0e-98 362.5 286 63.3
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 3.4e-97 359.4 398 49.5
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 1.3e-96 357.5 301 57.8
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 3.0e-93 346.3 349 50.1
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 7.3e-92 341.7 328 57.9
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 4.0e-90 335.9 322 52.5
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 2.2e-88 330.1 304 53.3
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 2.9e-88 329.7 304 53.6
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 3.1e-82 309.7 248 61.7
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 8.9e-82 308.1 325 51.7
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 5.8e-73 278.9 234 62.0
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 1.5e-44 184.5 379 36.7
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.2e-35 154.1 117 60.7
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 1.7e-27 127.9 92 62.0
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 5.2e-21 106.3 158 44.3
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 4.4e-20 103.2 65 67.7
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 9.7e-20 102.1 77 58.4
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 3.1e-18 97.1 251 30.3
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 5.3e-18 96.3 49 89.8
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.5e-15 88.2 118 51.7
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 1.0e-08 65.5 49 63.3
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 2.1e-06 57.8 128 31.2


User provided reference genes

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