Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12881 Utricularia gibba HOM05D007131 ORTHO05D009026 8.3e-134 480.3 236 100.0
MSTRG.12759 Avicennia marina HOM05D007131 ORTHO05D009026 5.7e-66 255.0 186 65.1
Migut.N00650 Erythranthe guttata HOM05D007131 ORTHO05D009026 2.8e-65 252.7 195 64.1
SGA_v2.0_scaffold77G25283 Striga asiatica HOM05D007131 ORTHO05D009026 1.1e-61 240.7 198 62.6
Nitab4.5_0000040g0390 Nicotiana tabacum HOM05D007131 ORTHO05D009026 3.0e-59 232.6 196 59.2
arahy.Tifrunner.gnm1.ann1.4977NQ Arachis hypogaea HOM05D007131 ORTHO05D009026 1.1e-58 230.7 194 60.8
Hma1.2p1_1492F.1_g286770 Hydrangea macrophylla HOM05D007131 ORTHO05D009026 5.7e-58 228.4 204 59.3
RcHm_v2.0_Chr6g0283441 Rosa chinensis HOM05D007131 ORTHO05D009026 1.7e-57 226.9 194 58.2
Nitab4.5_0001471g0060 Nicotiana tabacum HOM05D007131 ORTHO05D009026 3.7e-57 225.7 199 58.3
Peaxi162Scf01069g00214 Petunia axillaris HOM05D007131 ORTHO05D009026 8.2e-57 224.6 192 60.4
FvH4_2g18050 Fragaria vesca HOM05D007131 ORTHO05D009026 1.4e-56 223.8 195 57.4
Medtr7g053220 Medicago truncatula HOM05D007131 ORTHO05D009026 2.4e-56 223.0 200 57.5
TPR.G26850 Trifolium pratense HOM05D007131 ORTHO05D009026 2.4e-56 223.0 199 57.3
Ciclev10032761m.g Citrus clementina HOM05D007131 ORTHO05D009026 3.1e-56 222.6 201 58.2
ClCG09G007600 Citrullus lanatus HOM05D007131 ORTHO05D009026 4.1e-56 222.2 199 59.3
Dinv22999 Davidia involucrata HOM05D007131 ORTHO05D009026 9.1e-56 221.1 199 58.3
Glyma.08G345600 Glycine max HOM05D007131 ORTHO05D009026 2.0e-55 219.9 199 56.8
Lj1g0012821 Lotus japonicus HOM05D007131 ORTHO05D009026 2.0e-55 219.9 205 56.1
PGSC0003DMG400020651 Solanum tuberosum HOM05D007131 ORTHO05D009026 2.0e-55 219.9 200 57.5
Lalb_Chr13g0291041 Lupinus albus HOM05D007131 ORTHO05D009026 2.6e-55 219.5 200 57.5
Solyc06g007590.3 Solanum lycopersicum HOM05D007131 ORTHO05D009026 2.6e-55 219.5 202 56.9
Thecc.01G214300 Theobroma cacao HOM05D007131 ORTHO05D009026 2.6e-55 219.5 188 59.6
MELO3C015773.2 Cucumis melo HOM05D007131 ORTHO05D009026 3.5e-55 219.2 199 58.8
CsaV3_7G027510 Cucumis sativus L. HOM05D007131 ORTHO05D009026 3.5e-55 219.2 199 58.8
Potri.002G248800 Populus trichocarpa HOM05D007131 ORTHO05D009026 3.5e-55 219.2 200 57.0
CANSAT01G0405 Cannabis sativa HOM05D007131 ORTHO05D009026 5.9e-55 218.4 200 58.0
Cfa010368 Carpinus fangiana HOM05D007131 ORTHO05D009026 5.9e-55 218.4 194 57.7
Gohir.A11G141300 Gossypium hirsutum HOM05D007131 ORTHO05D009026 5.9e-55 218.4 185 60.0
AL8G21510 Arabidopsis lyrata HOM05D007131 ORTHO05D009026 7.7e-55 218.0 188 59.6
DCAR_004756 Daucus carota HOM05D007131 ORTHO05D009026 7.7e-55 218.0 185 57.3
BcaC06g30783 Brassica carinata HOM05D007131 ORTHO05D009026 1.3e-54 217.2 186 59.7
CAN.G181.37 Capsicum annuum HOM05D007131 ORTHO05D009026 1.7e-54 216.9 202 56.9
HanXRQChr08g0231751 Helianthus annuus HOM05D007131 ORTHO05D009026 1.7e-54 216.9 197 55.3
A06p39100 Brassica napus HOM05D007131 ORTHO05D009026 2.2e-54 216.5 186 59.1
FAN15G1265 Fragaria x ananassa HOM05D007131 ORTHO05D009026 2.2e-54 216.5 203 57.1
Gorai.007G158200 Gossypium raimondii HOM05D007131 ORTHO05D009026 2.2e-54 216.5 192 59.9
Prupe.8G193200 Prunus persica HOM05D007131 ORTHO05D009026 2.2e-54 216.5 198 58.6
Sc24g0003400 Simmondsia chinensis HOM05D007131 ORTHO05D009026 2.2e-54 216.5 195 57.4
CiPaw.14G041500 Carya illinoinensis HOM05D007131 ORTHO05D009026 2.9e-54 216.1 208 55.3
Sp2g18910 Schrenkiella parvula HOM05D007131 ORTHO05D009026 3.8e-54 215.7 186 58.6
EL10Ac7g17974 Beta vulgaris HOM05D007131 ORTHO05D009026 6.5e-54 214.9 193 58.0
Actinidia09448 Actinidia chinensis HOM05D007131 ORTHO05D009026 8.5e-54 214.5 200 56.0
ECA247G2839 Erigeron canadensis HOM05D004243 ORTHO05D005018 1.1e-53 214.2 197 54.3
Sed0006902 Sechium edule HOM05D007131 ORTHO05D009026 1.1e-53 214.2 199 58.3
THA.LOC104802654 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 1.1e-53 214.2 193 57.0
MD05G1165000 Malus domestica HOM05D007131 ORTHO05D009026 1.5e-53 213.8 198 57.1
BcaB04g19580 Brassica carinata HOM05D007131 ORTHO05D009026 1.9e-53 213.4 187 57.8
BcaC04g23770 Brassica carinata HOM05D007131 ORTHO05D009026 1.9e-53 213.4 182 58.8
C07p39240 Brassica napus HOM05D007131 ORTHO05D009026 1.9e-53 213.4 187 59.4
C09p04870 Brassica napus HOM05D007131 ORTHO05D009026 1.9e-53 213.4 182 58.8
Sabra02G0189500 Salix brachista HOM05D007131 ORTHO05D009026 1.9e-53 213.4 200 55.0
Carub.0008s0817 Capsella rubella HOM05D007131 ORTHO05D009026 3.2e-53 212.6 188 57.4
BolC7t44444H Brassica oleracea HOM05D007131 ORTHO05D009026 4.2e-53 212.2 186 57.5
Oeu064654.1 Olea europaea HOM05D007131 ORTHO05D009026 4.2e-53 212.2 168 63.1
Psat3g150760 Pisum sativum HOM05D007131 ORTHO05D009026 4.2e-53 212.2 199 55.8
Haze_03320 Corylus avellana HOM05D007131 ORTHO05D009026 5.5e-53 211.8 208 54.3
THA.LOC104818990 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 5.5e-53 211.8 189 57.7
MD10G1154300 Malus domestica HOM05D007131 ORTHO05D009026 9.4e-53 211.1 198 57.6
Actinidia23782 Actinidia chinensis HOM05D007131 ORTHO05D009026 1.2e-52 210.7 195 55.9
Duzib138G1926 Durio zibethinus HOM05D007131 ORTHO05D009026 1.6e-52 210.3 184 59.2
Rhsim01G0249500 Rhododendron simsii HOM05D007131 ORTHO05D009026 2.1e-52 209.9 200 55.5
Duzib211G0587 Durio zibethinus HOM05D007131 ORTHO05D009026 1.0e-51 207.6 198 55.1
Eucgr.H00746 Eucalyptus grandis HOM05D007131 ORTHO05D009026 1.0e-51 207.6 211 50.7
Lsat_1_v5_gn_9_17941 Lactuca sativa HOM05D007131 ORTHO05D009026 1.0e-51 207.6 182 56.6
QL09p048363 Quercus lobata HOM05D007131 ORTHO05D009026 3.0e-51 206.1 196 54.6
A09p04560 Brassica napus HOM05D007131 ORTHO05D009026 5.2e-51 205.3 202 53.5
BraA09t36091Z Brassica rapa HOM05D007131 ORTHO05D009026 5.2e-51 205.3 202 53.5
PSO675G2392 Papaver somniferum HOM05D007131 ORTHO05D009026 5.2e-51 205.3 200 50.5
BolC9t53415H Brassica oleracea HOM05D007131 ORTHO05D009026 1.2e-50 204.1 195 54.9
vmacro14706 Vaccinium macrocarpon HOM05D007131 ORTHO05D009026 7.5e-50 201.4 216 50.5
Aqoxy2G04077 Aquilegia oxysepala HOM05D007131 ORTHO05D009026 9.8e-50 201.1 196 53.6
Cc01_g16360 Coffea canephora HOM05D007131 ORTHO05D009026 1.3e-49 200.7 146 63.7
PSO017G7069 Papaver somniferum HOM05D007131 ORTHO05D009026 2.8e-49 199.5 201 51.2
TAR362G0782 Trochodendron aralioides HOM05D007131 ORTHO05D009026 2.8e-49 199.5 195 54.9
Dinv28824 Davidia involucrata HOM05D007131 ORTHO05D009026 4.8e-49 198.7 134 70.1
ATR1149G002 Amborella trichopoda HOM05D007131 ORTHO05D009026 7.7e-47 191.4 197 51.3
Aa31sc517G10 Aethionema arabicum HOM05D007131 ORTHO05D009026 3.8e-46 189.1 237 44.7
HPP92_007612 Vanilla planifolia HOM05D007131 ORTHO05D009026 1.9e-45 186.8 192 51.0
Nn1g09828 Nelumbo nucifera HOM05D007131 ORTHO05D009026 4.7e-44 182.2 135 63.7
TWI36G0143 Tripterygium wilfordii HOM05D007131 ORTHO05D009026 1.4e-43 180.6 168 57.1
Atru.chr6.1589 Acer truncatum HOM05D007131 ORTHO05D009026 2.3e-43 179.9 182 54.4
SMO201G0137 Selaginella moellendorffii HOM05D007131 ORTHO05D009026 4.0e-43 179.1 121 66.9
Os12g0233300 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 1.2e-42 177.6 136 59.6
VMungo1383G1151 Vigna mungo HOM05D007131 ORTHO05D009026 4.1e-40 169.1 198 48.0
FAN24G0325 Fragaria x ananassa HOM05D007131 ORTHO05D009026 5.4e-40 168.7 221 44.3
Manes.12G051500 Manihot esculenta HOM05D007131 ORTHO05D009026 5.4e-40 168.7 138 61.6
CDE08G0780 Ceratophyllum demersum HOM05D007131 ORTHO05D009026 1.2e-39 167.5 162 54.3
FAN27G0491 Fragaria x ananassa HOM05D007131 ORTHO05D009026 1.6e-39 167.2 220 45.5
SalBow3G2460 Salvia bowleyana HOM05D007131 ORTHO05D009026 3.5e-39 166.0 284 37.7
AT5G48545 Arabidopsis thaliana HOM05D007131 ORTHO05D009026 5.0e-38 162.2 140 59.3
Phvul.008G134700 Phaseolus vulgaris HOM05D007131 ORTHO05D009026 6.6e-38 161.8 125 64.8
Pp3c1_40870 Physcomitrium patens HOM05D007131 ORTHO05D009026 3.3e-37 159.5 141 52.5
Gohir.D11G147600 Gossypium hirsutum HOM05D007131 ORTHO05D009026 5.6e-37 158.7 138 59.4
CBR_g28074 Chara braunii HOM05D007131 ORTHO05D009026 6.1e-36 155.2 161 50.3
AagrBONN_evm.TU.Sc2ySwM_368.401 Anthoceros agrestis HOM05D007131 ORTHO05D009026 1.0e-35 154.5 155 48.4
CBR_g41484 Chara braunii HOM05D007131 ORTHO05D009026 1.0e-35 154.5 144 52.8
Sopen06g002490 Solanum pennellii HOM05D007131 ORTHO05D009026 2.6e-34 149.8 114 64.9
AUR62022148 Chenopodium quinoa HOM05D007131 ORTHO05D009026 6.4e-33 145.2 272 36.8
GSVIVG01002500001 Vitis vinifera HOM05D007131 ORTHO05D009026 2.0e-31 140.2 95 71.6
Thhalv10005043m.g Eutrema salsugineum HOM05D007131 ORTHO05D009026 3.1e-27 126.3 120 53.3
arahy.Tifrunner.gnm1.ann1.YI3R6M Arachis hypogaea HOM05D007131 ORTHO05D009026 6.8e-27 125.2 168 42.9
Lj2A1119T34 Lonicera japonica HOM05D007131 ORTHO05D009026 9.2e-24 114.8 118 54.2
AUR62001177 Chenopodium quinoa HOM05D007131 ORTHO05D009026 3.4e-18 96.3 205 35.1
CARHR183470 Cardamine hirsuta HOM05D007131 ORTHO05D009026 1.3e-17 94.4 99 50.5
CiPaw.14G045900 Carya illinoinensis HOM05D007131 ORTHO05D009026 1.7e-17 94.0 89 57.3
MCO06G116 Micromonas commoda HOM05D007131 ORTHO05D009026 6.4e-17 92.0 106 38.7
SEGI_25619 Sequoiadendron giganteum HOM05D007131 ORTHO05D009026 8.3e-17 91.7 85 56.5
QL09p048378 Quercus lobata HOM05D007131 ORTHO05D009026 1.4e-16 90.9 70 60.0
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 4.0e-11 72.8 116 38.8
Os11g0295000 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 8.9e-11 71.6 69 55.1
Cpa.g.sc8.95 Carica papaya HOM05D007131 ORTHO05D009026 2.7e-07 60.1 84 38.1
PRCOL_00000589 Prasinoderma coloniale HOM05D004274 ORTHO05D004980 3.5e-07 59.7 96 27.1
Cre15.g639400 Chlamydomonas reinhardtii HOM05D005501 ORTHO05D007485 1.7e-06 57.4 87 32.2
Aa31LG2G15100 Aethionema arabicum HOM05D002397 ORTHO05D002667 5.1e-06 55.8 194 24.7
Cre17.g698266 Chlamydomonas reinhardtii HOM05D004274 ORTHO05D004980 5.1e-06 55.8 84 33.3


User provided reference genes

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