Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12834 Utricularia gibba HOM05D006199 ORTHO05D006558 6.5e-193 677.2 332 100.0
SalBow1G2578 Salvia bowleyana HOM05D006199 ORTHO05D006558 2.9e-76 289.7 356 50.0
MSTRG.19995 Avicennia marina HOM05D006199 ORTHO05D006558 2.5e-75 286.6 338 49.7
Migut.B00085 Erythranthe guttata HOM05D006199 ORTHO05D006558 6.1e-74 282.0 317 50.8
Sopen01g053590 Solanum pennellii HOM05D006199 ORTHO05D006558 1.6e-66 257.3 313 47.3
Solyc01g111550.3 Solanum lycopersicum HOM05D006199 ORTHO05D006558 2.8e-66 256.5 313 47.3
PGSC0003DMG400006190 Solanum tuberosum HOM05D006199 ORTHO05D006558 3.6e-66 256.1 314 47.1
Ciclev10028644m.g Citrus clementina HOM05D006199 ORTHO05D006558 5.2e-65 252.3 288 47.9
Actinidia00620 Actinidia chinensis HOM05D006199 ORTHO05D006558 1.5e-64 250.8 304 48.4
TWI75G1548 Tripterygium wilfordii HOM05D006199 ORTHO05D006558 4.9e-63 245.7 308 46.4
CAN.G588.74 Capsicum annuum HOM05D006199 ORTHO05D006558 8.3e-63 245.0 313 46.0
Gohir.A01G168100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 8.3e-63 245.0 316 44.6
Cfa005236 Carpinus fangiana HOM05D006199 ORTHO05D006558 1.1e-62 244.6 310 45.8
Duzib132G0247 Durio zibethinus HOM05D006199 ORTHO05D006558 1.1e-62 244.6 316 45.6
Nitab4.5_0005853g0010 Nicotiana tabacum HOM05D006199 ORTHO05D006558 1.8e-62 243.8 311 46.3
Gorai.002G197400 Gossypium raimondii HOM05D006199 ORTHO05D006558 2.4e-62 243.4 316 44.3
Dinv41943 Davidia involucrata HOM05D006199 ORTHO05D006558 7.0e-62 241.9 315 45.1
Gohir.D01G159100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 7.0e-62 241.9 316 44.0
PGR142G1980 Punica granatum HOM05D006199 ORTHO05D006558 9.2e-62 241.5 336 42.3
CANSAT25G2535 Cannabis sativa HOM05D006199 ORTHO05D006558 7.8e-61 238.4 313 44.4
Nitab4.5_0006645g0060 Nicotiana tabacum HOM05D006199 ORTHO05D006558 1.7e-60 237.3 338 43.2
Cc02_g16220 Coffea canephora HOM05D006199 ORTHO05D006558 6.6e-60 235.3 335 43.9
CiPaw.05G081500 Carya illinoinensis HOM05D006199 ORTHO05D006558 8.6e-60 235.0 312 44.6
MD10G1095100 Malus domestica HOM05D006199 ORTHO05D006558 8.6e-60 235.0 311 44.4
Lj5A179T83 Lonicera japonica HOM05D006199 ORTHO05D006558 1.9e-59 233.8 328 44.2
Hund00025 Selenicereus undatus HOM05D006199 ORTHO05D006558 2.5e-59 233.4 311 41.8
Phvul.009G119500 Phaseolus vulgaris HOM05D006199 ORTHO05D006558 1.6e-58 230.7 318 44.7
Carub.0004s0005 Capsella rubella HOM05D006199 ORTHO05D006558 3.6e-58 229.6 308 43.8
COL.COLO4_17328 Corchorus olitorius HOM05D006199 ORTHO05D006558 3.6e-58 229.6 293 47.1
Sabra09G0104300 Salix brachista HOM05D006199 ORTHO05D006558 4.7e-58 229.2 322 44.4
VMungo1309G0102 Vigna mungo HOM05D006199 ORTHO05D006558 4.7e-58 229.2 315 44.4
Thecc.02G060900 Theobroma cacao HOM05D006199 ORTHO05D006558 8.0e-58 228.4 316 44.3
TAR628G1195 Trochodendron aralioides HOM05D006199 ORTHO05D006558 8.0e-58 228.4 313 44.7
Potri.009G134500 Populus trichocarpa HOM05D006199 ORTHO05D006558 1.0e-57 228.0 318 42.8
GSVIVG01024030001 Vitis vinifera HOM05D006199 ORTHO05D006558 1.4e-57 227.6 310 45.2
QL11p050170 Quercus lobata HOM05D006199 ORTHO05D006558 1.8e-57 227.3 318 42.5
Eucgr.I01413 Eucalyptus grandis HOM05D006199 ORTHO05D006558 4.0e-57 226.1 323 43.7
AL4G10110 Arabidopsis lyrata HOM05D006199 ORTHO05D006558 1.5e-56 224.2 308 43.2
Oeu050364.1 Olea europaea HOM05D006199 ORTHO05D006558 1.5e-56 224.2 242 51.7
Sed0003263 Sechium edule HOM05D006199 ORTHO05D006558 1.5e-56 224.2 326 42.0
ClCG02G011890 Citrullus lanatus HOM05D006199 ORTHO05D006558 4.4e-56 222.6 313 42.2
CsaV3_2G016060 Cucumis sativus L. HOM05D006199 ORTHO05D006558 5.8e-56 222.2 309 42.4
Peaxi162Scf00362g00651 Petunia axillaris HOM05D006199 ORTHO05D006558 5.8e-56 222.2 324 43.2
RcHm_v2.0_Chr6g0251921 Rosa chinensis HOM05D006199 ORTHO05D006558 7.5e-56 221.9 316 41.5
Lsat_1_v5_gn_4_71580 Lactuca sativa HOM05D006199 ORTHO05D006558 3.7e-55 219.5 314 43.3
Thhalv10000193m.g Eutrema salsugineum HOM05D006199 ORTHO05D006558 4.9e-55 219.2 309 41.7
FvH4_2g01260 Fragaria vesca HOM05D006199 ORTHO05D006558 4.9e-55 219.2 316 40.8
Haze_02147 Corylus avellana HOM05D006199 ORTHO05D006558 6.4e-55 218.8 375 38.4
Sp4g00170 Schrenkiella parvula HOM05D006199 ORTHO05D006558 1.4e-54 217.6 310 42.3
EL10Ac9g21386 Beta vulgaris HOM05D006199 ORTHO05D006558 2.4e-54 216.9 313 40.6
AT2G20980 Arabidopsis thaliana HOM05D006199 ORTHO05D006558 3.2e-54 216.5 308 41.2
Aa31LG7G15660 Aethionema arabicum HOM05D006199 ORTHO05D006558 7.0e-54 215.3 310 42.9
Rhsim11G0191800 Rhododendron simsii HOM05D006199 ORTHO05D006558 7.0e-54 215.3 315 42.2
Nn5g30772 Nelumbo nucifera HOM05D006199 ORTHO05D006558 9.2e-54 214.9 314 42.4
FAN20G1063 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.0e-53 213.8 316 40.8
THA.LOC104807811 Tarenaya hassleriana HOM05D006199 ORTHO05D006558 3.5e-53 213.0 344 39.8
Medtr3g117880 Medicago truncatula HOM05D006199 ORTHO05D006558 6.0e-53 212.2 317 42.6
DCAR_022808 Daucus carota HOM05D006199 ORTHO05D006558 7.8e-53 211.8 308 44.2
FAN27G0272 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.0e-52 211.5 315 40.0
Glyma.04G003800 Glycine max HOM05D006199 ORTHO05D006558 1.0e-52 211.5 319 41.4
AUR62013038 Chenopodium quinoa HOM05D006199 ORTHO05D006558 2.3e-52 210.3 317 39.1
MBI08_g14630_MAGBIO Magnolia biondii HOM05D006199 ORTHO05D006558 6.6e-52 208.8 319 40.1
ECA234G0878 Erigeron canadensis HOM05D006199 ORTHO05D006558 8.6e-52 208.4 307 44.3
Cpa.g.sc37.143 Carica papaya HOM05D006199 ORTHO05D006558 5.6e-51 205.7 248 45.2
AUR62010046 Chenopodium quinoa HOM05D006199 ORTHO05D006558 5.6e-51 205.7 291 40.5
Ah.01g022950 Amaranthus hybridus HOM05D006199 ORTHO05D006558 3.6e-50 203.0 318 37.7
arahy.Tifrunner.gnm1.ann1.H9ZTXG Arachis hypogaea HOM05D006199 ORTHO05D006558 8.0e-50 201.8 311 41.5
Lj1g0009253 Lotus japonicus HOM05D006199 ORTHO05D006558 8.0e-50 201.8 326 42.3
PSO675G4200 Papaver somniferum HOM05D006199 ORTHO05D006558 1.8e-49 200.7 315 42.2
C03p33040 Brassica napus HOM05D006199 ORTHO05D006558 6.8e-49 198.7 319 39.8
MELO3C020815.2 Cucumis melo HOM05D006199 ORTHO05D006558 6.8e-49 198.7 358 36.0
Aqoxy6G02177 Aquilegia oxysepala HOM05D006199 ORTHO05D006558 8.9e-49 198.4 316 39.9
PSO541G4917 Papaver somniferum HOM05D006199 ORTHO05D006558 8.9e-49 198.4 310 42.6
BcaC01g04861 Brassica carinata HOM05D006199 ORTHO05D006558 1.5e-48 197.6 318 39.9
BolC3t15631H Brassica oleracea HOM05D006199 ORTHO05D006558 1.5e-48 197.6 318 39.6
Prupe.8G164900 Prunus persica HOM05D006199 ORTHO05D006558 2.0e-48 197.2 312 39.1
BraA03t11952Z Brassica rapa HOM05D006199 ORTHO05D006558 3.4e-48 196.4 319 39.5
A03p27410 Brassica napus HOM05D006199 ORTHO05D006558 7.5e-48 195.3 319 39.5
arahy.Tifrunner.gnm1.ann1.WS10KT Arachis hypogaea HOM05D006199 ORTHO05D006558 1.7e-47 194.1 292 41.8
HanXRQChr10g0300911 Helianthus annuus HOM05D006199 ORTHO05D006558 1.7e-47 194.1 305 41.3
Manes.04G075600 Manihot esculenta HOM05D006199 ORTHO05D006558 1.9e-46 190.7 264 40.5
Ca_15302_v3 Cicer arietinum L. HOM05D006199 ORTHO05D006558 3.2e-46 189.9 270 42.2
CARHR111860 Cardamine hirsuta HOM05D006199 ORTHO05D006558 7.0e-46 188.7 280 40.4
TPR.G38477 Trifolium pratense HOM05D006199 ORTHO05D006558 7.0e-46 188.7 327 38.8
ATR0078G008 Amborella trichopoda HOM05D006199 ORTHO05D006558 9.2e-46 188.3 317 37.5
FAN24G2717 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.2e-45 188.0 271 39.9
SHI05731 Sapria himalayana HOM05D006199 ORTHO05D006558 6.0e-45 185.7 313 36.7
Sc18g0006460 Simmondsia chinensis HOM05D006199 ORTHO05D006558 8.6e-44 181.8 267 40.4
Atru.chr5.3311 Acer truncatum HOM05D006199 ORTHO05D006558 2.5e-43 180.3 266 41.7
Zm00001eb331950 Zea mays HOM05D006199 ORTHO05D006558 5.6e-43 179.1 311 37.0
CSS0017687 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 8.1e-42 175.3 193 48.2
CiPaw.06G122500 Carya illinoinensis HOM05D006199 ORTHO05D006558 1.4e-41 174.5 312 38.5
Os09g0539400 Oryza sativa ssp. japonica HOM05D006199 ORTHO05D006558 5.2e-41 172.6 312 35.9
BcaB07g29803 Brassica carinata HOM05D006199 ORTHO05D006558 6.4e-39 165.6 328 36.3
vmacro02274 Vaccinium macrocarpon HOM05D006199 ORTHO05D006558 7.3e-35 152.1 193 43.5
Lalb_Chr23g0265011 Lupinus albus HOM05D006199 ORTHO05D006558 7.1e-30 135.6 235 37.4
HPP92_008341 Vanilla planifolia HOM05D006199 ORTHO05D006558 2.1e-29 134.0 312 34.3
AUR62027127 Chenopodium quinoa HOM05D006199 ORTHO05D006558 1.1e-25 121.7 197 38.1
FAN11G3400 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.4e-25 121.3 185 38.9
FAN12G0591 Fragaria x ananassa HOM05D006199 ORTHO05D006558 4.0e-25 119.8 140 44.3
FAN06G5031 Fragaria x ananassa HOM05D006199 ORTHO05D006558 9.0e-25 118.6 134 45.5
AagrBONN_evm.TU.Sc2ySwM_362.2501 Anthoceros agrestis HOM05D006199 ORTHO05D006558 3.5e-21 106.7 181 37.0
Psat5g002720 Pisum sativum HOM05D006199 ORTHO05D006558 4.6e-21 106.3 298 33.9
Mapoly0068s0001 Marchantia polymorpha HOM05D006199 ORTHO05D006558 2.5e-19 100.5 210 31.4
FvH4_3g06660 Fragaria vesca HOM05D006199 ORTHO05D006558 3.3e-19 100.1 168 36.3
Pp3c15_24300 Physcomitrium patens HOM05D006199 ORTHO05D006558 2.8e-18 97.1 207 31.9
FvH4_4g14930 Fragaria vesca HOM05D006199 ORTHO05D006558 8.1e-18 95.5 134 39.6
FvH4_1g02330 Fragaria vesca HOM05D006199 ORTHO05D006558 4.0e-17 93.2 86 47.7
FAN14G5753 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.4e-16 90.1 86 46.5
RcHm_v2.0_Chr5g0048301 Rosa chinensis HOM05D006199 ORTHO05D006558 1.7e-15 87.8 189 28.6
FAN24G0607 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.9e-12 76.6 65 49.2
FvH4_2g23470 Fragaria vesca HOM05D006199 ORTHO05D006558 1.1e-11 75.1 61 50.8
FAN14G4166 Fragaria x ananassa HOM05D006199 ORTHO05D006558 7.4e-11 72.4 56 55.4
FAN06G2201 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.6e-10 71.2 139 32.4
MCO03G518 Micromonas commoda HOM05D006199 ORTHO05D006558 1.6e-10 71.2 164 32.3
FvH4_5g37420 Fragaria vesca HOM05D006199 ORTHO05D006558 9.0e-09 65.5 122 35.2
FvH4_7g17270 Fragaria vesca HOM05D006199 ORTHO05D006558 1.3e-07 61.6 80 41.2
SGA_v2.0_scaffold58G20372 Striga asiatica HOM05D006199 ORTHO05D006558 1.4e-06 58.2 72 44.4


User provided reference genes

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