Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 7.7e-189 663.7 342 100.0
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 4.7e-69 265.8 250 60.0
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 5.2e-68 262.3 264 58.3
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 1.4e-65 254.2 317 48.6
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 1.7e-63 247.3 211 60.7
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 5.0e-63 245.7 210 60.0
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 5.0e-63 245.7 210 59.0
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 6.5e-63 245.4 223 56.5
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 4.2e-62 242.7 207 60.4
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 7.2e-62 241.9 208 60.1
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 1.2e-61 241.1 205 62.4
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.2e-61 241.1 208 59.6
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 2.1e-61 240.4 199 63.8
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 2.1e-61 240.4 208 60.6
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 2.7e-61 240.0 204 61.3
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 2.7e-61 240.0 207 61.8
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 2.7e-61 240.0 208 59.1
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 4.7e-61 239.2 205 62.0
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 1.0e-60 238.0 205 61.0
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 2.3e-60 236.9 204 60.8
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 2.3e-60 236.9 209 59.8
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 2.3e-60 236.9 198 63.1
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 4.0e-60 236.1 214 57.9
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 4.0e-60 236.1 199 61.3
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 4.0e-60 236.1 224 57.6
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 5.2e-60 235.7 204 61.8
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 6.8e-60 235.3 207 57.5
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 6.8e-60 235.3 207 57.5
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.2e-59 234.6 199 61.3
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 1.2e-59 234.6 206 60.2
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 1.5e-59 234.2 228 55.7
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 1.5e-59 234.2 208 59.6
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 2.6e-59 233.4 211 58.8
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 2.6e-59 233.4 199 61.3
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 1.7e-58 230.7 213 57.3
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.7e-58 230.7 182 63.7
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 2.8e-58 229.9 212 57.1
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 6.3e-58 228.8 230 53.5
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 6.3e-58 228.8 202 58.9
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 4.1e-57 226.1 201 59.2
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 4.5e-56 222.6 216 56.0
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 1.3e-55 221.1 218 55.0
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 2.9e-55 219.9 188 60.6
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 5.0e-55 219.2 214 57.0
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 8.6e-55 218.4 272 49.6
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 1.9e-54 217.2 230 53.9
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 4.2e-54 216.1 186 59.7
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.2e-53 214.5 184 58.7
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 5.2e-52 209.1 249 49.8
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.2e-51 208.0 184 59.2
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 3.4e-51 206.5 200 53.5
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 7.5e-51 205.3 213 53.1
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 7.5e-51 205.3 230 49.6
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 6.3e-50 202.2 222 53.6
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 1.1e-49 201.4 234 52.1
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 1.1e-49 201.4 201 55.2
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 1.1e-49 201.4 201 55.2
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.4e-49 201.1 201 56.7
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 1.6e-48 197.6 203 54.2
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 2.7e-48 196.8 205 52.7
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 2.3e-47 193.7 161 62.7
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 7.3e-46 188.7 161 59.6
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 2.8e-45 186.8 182 55.5
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 1.0e-44 184.9 210 50.5
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 4.0e-44 183.0 202 47.5
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 4.0e-44 183.0 186 52.2
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 8.9e-44 181.8 202 46.0
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 2.6e-43 180.3 156 57.1
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 1.7e-42 177.6 233 46.4
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 1.1e-41 174.9 196 45.9
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 9.5e-38 161.8 142 59.9
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 5.4e-33 146.0 209 42.6
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 3.5e-32 143.3 153 51.6
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 3.9e-31 139.8 123 59.3
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 1.1e-28 131.7 194 41.2
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 4.4e-27 126.3 108 58.3
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 5.8e-27 125.9 97 63.9
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 5.8e-27 125.9 116 54.3
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 9.9e-27 125.2 93 65.6
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 6.4e-26 122.5 118 52.5
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 9.5e-22 108.6 94 55.3
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 8.1e-21 105.5 75 68.0
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 3.1e-20 103.6 203 32.0
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 1.2e-19 101.7 202 32.7
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 1.9e-14 84.3 72 58.3
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 4.7e-13 79.7 78 51.3
Os07g0222900 Oryza sativa ssp. japonica HOM05D007678 ORTHO05D009658 3.2e-09 67.0 65 58.5
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 9.3e-09 65.5 55 60.0
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 4.6e-08 63.2 64 53.1
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 7.8e-08 62.4 60 50.0


User provided reference genes

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