Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 1.6e-71 272.7 144 100.0
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 3.6e-31 138.7 124 62.9
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 1.1e-27 127.1 109 63.3
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 3.2e-27 125.6 109 65.1
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 9.2e-27 124.0 109 60.6
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 1.3e-25 120.2 109 59.6
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 1.3e-25 120.2 126 55.6
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 3.9e-25 118.6 109 59.6
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 6.6e-25 117.9 108 57.4
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 6.6e-25 117.9 126 55.6
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 8.7e-25 117.5 97 64.9
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 2.5e-24 115.9 107 55.1
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 3.3e-24 115.5 112 58.9
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 3.3e-24 115.5 109 58.7
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 3.3e-24 115.5 109 58.7
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 4.3e-24 115.2 109 58.7
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 5.6e-24 114.8 109 58.7
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 5.6e-24 114.8 128 53.9
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 7.3e-24 114.4 109 62.4
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 7.3e-24 114.4 99 61.6
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 1.6e-23 113.2 85 71.8
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 2.1e-23 112.8 101 59.4
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 3.6e-23 112.1 109 56.9
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 3.6e-23 112.1 117 55.6
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 3.6e-23 112.1 109 55.0
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 4.7e-23 111.7 130 54.6
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 6.2e-23 111.3 109 56.0
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 8.1e-23 110.9 130 53.8
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 8.1e-23 110.9 109 56.9
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 8.1e-23 110.9 95 65.3
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.1e-22 110.5 97 61.9
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 1.1e-22 110.5 109 56.9
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 1.4e-22 110.2 123 52.0
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 1.4e-22 110.2 112 58.9
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 1.8e-22 109.8 125 52.8
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 1.8e-22 109.8 94 63.8
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 2.4e-22 109.4 120 55.0
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 2.4e-22 109.4 130 53.1
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 2.4e-22 109.4 107 57.0
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 2.4e-22 109.4 120 51.7
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 5.2e-22 108.2 123 51.2
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 5.2e-22 108.2 123 52.0
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 6.9e-22 107.8 109 56.0
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 9.0e-22 107.5 98 59.2
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 9.0e-22 107.5 111 55.9
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 9.0e-22 107.5 120 55.0
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 9.0e-22 107.5 109 56.0
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 9.0e-22 107.5 111 55.0
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 1.2e-21 107.1 109 55.0
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 1.2e-21 107.1 107 55.1
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 2.0e-21 106.3 111 55.0
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 2.0e-21 106.3 106 56.6
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.0e-21 106.3 120 51.7
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 3.4e-21 105.5 120 53.3
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 4.4e-21 105.1 120 52.5
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 5.8e-21 104.8 124 50.8
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 5.8e-21 104.8 96 61.5
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 5.8e-21 104.8 97 56.7
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 1.3e-20 103.6 118 54.2
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 1.3e-20 103.6 94 60.6
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.3e-20 103.6 96 62.5
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 1.3e-20 103.6 106 57.5
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 1.7e-20 103.2 113 54.0
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 2.2e-20 102.8 94 60.6
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 2.2e-20 102.8 93 59.1
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 2.9e-20 102.4 123 49.6
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 2.9e-20 102.4 106 56.6
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 3.8e-20 102.1 95 58.9
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 3.8e-20 102.1 109 55.0
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 3.8e-20 102.1 99 55.6
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 4.9e-20 101.7 97 54.6
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 4.9e-20 101.7 141 43.3
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 4.9e-20 101.7 94 60.6
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 6.4e-20 101.3 145 50.3
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 1.4e-19 100.1 96 60.4
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 1.9e-19 99.8 97 59.8
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 1.9e-19 99.8 116 51.7
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 1.9e-19 99.8 96 58.3
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 7.1e-19 97.8 97 58.8
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 9.3e-19 97.4 147 45.6
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 3.5e-18 95.5 104 53.8
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 3.5e-18 95.5 78 66.7
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 1.0e-17 94.0 89 58.4
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 1.0e-17 94.0 110 50.9
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 1.3e-17 93.6 132 48.5
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 2.3e-17 92.8 73 68.5
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 3.0e-17 92.4 108 50.9
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 3.0e-17 92.4 126 46.8
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 3.9e-17 92.0 108 50.0
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 6.6e-17 91.3 74 63.5
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 8.7e-17 90.9 90 56.7
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 1.9e-16 89.7 109 50.5
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 4.3e-16 88.6 107 49.5
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 4.3e-16 88.6 76 64.5
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 5.6e-16 88.2 68 67.6
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.6e-15 86.7 84 58.3
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.4e-14 83.6 72 65.3
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 4.0e-14 82.0 102 46.1
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 1.5e-13 80.1 81 53.1
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 2.6e-13 79.3 72 62.5
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 7.6e-13 77.8 71 59.2
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 9.9e-13 77.4 114 47.4
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 2.2e-12 76.3 71 62.0
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 3.2e-11 72.4 92 46.7
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 3.5e-10 68.9 71 50.7
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 6.0e-10 68.2 57 61.4
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 1.5e-08 63.5 47 66.0
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 4.3e-08 62.0 62 53.2


User provided reference genes

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