Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12674 Utricularia gibba HOM05D004998 ORTHO05D006104 7.5e-71 270.4 135 100.0
GSVIVG01024930001 Vitis vinifera HOM05D004998 ORTHO05D006104 6.4e-14 81.3 137 40.1
Migut.D02075 Erythranthe guttata HOM05D004998 ORTHO05D006104 4.2e-13 78.6 141 43.3
Ciclev10029345m.g Citrus clementina HOM05D004998 ORTHO05D006104 1.6e-12 76.6 138 39.9
Manes.01G171600 Manihot esculenta HOM05D004998 ORTHO05D006104 1.8e-11 73.2 141 39.7
Oeu053883.1 Olea europaea HOM05D004998 ORTHO05D006104 2.3e-11 72.8 138 36.2
DCAR_005961 Daucus carota HOM05D004998 ORTHO05D006104 6.7e-11 71.2 142 35.9
SGA_v2.0_scaffold41G15739 Striga asiatica HOM05D004998 ORTHO05D006104 6.7e-11 71.2 139 41.0
Dinv17028 Davidia involucrata HOM05D004998 ORTHO05D006104 8.7e-11 70.9 141 37.6
Dinv42976 Davidia involucrata HOM05D004998 ORTHO05D006104 8.7e-11 70.9 141 37.6
Dinv43123 Davidia involucrata HOM05D004998 ORTHO05D006104 8.7e-11 70.9 141 37.6
Hund18896 Selenicereus undatus HOM05D004998 ORTHO05D006104 8.7e-11 70.9 140 35.0
Nn2g11147 Nelumbo nucifera HOM05D004998 ORTHO05D006104 1.1e-10 70.5 140 38.6
MSTRG.18567 Avicennia marina HOM05D004998 ORTHO05D006104 3.3e-10 68.9 140 37.9
CANSAT54G1321 Cannabis sativa HOM05D004998 ORTHO05D006104 3.3e-10 68.9 127 37.0
Eucgr.B02327 Eucalyptus grandis HOM05D004998 ORTHO05D006104 3.3e-10 68.9 133 39.1
Potri.009G033400 Populus trichocarpa HOM05D004998 ORTHO05D006104 3.3e-10 68.9 139 35.3
TWI75G0636 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 4.3e-10 68.6 141 39.7
Gohir.D05G094800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 5.6e-10 68.2 126 39.7
Lj1A149T62 Lonicera japonica HOM05D004998 ORTHO05D006104 5.6e-10 68.2 138 38.4
CSS0033668 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 7.4e-10 67.8 139 39.6
CDE02G2808 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 1.6e-09 66.6 130 33.8
Cc01_g13080 Coffea canephora HOM05D004998 ORTHO05D006104 1.6e-09 66.6 141 34.8
CsaV3_6G016720 Cucumis sativus L. HOM05D004998 ORTHO05D006104 1.6e-09 66.6 131 38.2
Gorai.009G098000 Gossypium raimondii HOM05D004998 ORTHO05D006104 1.6e-09 66.6 124 37.9
Hma1.2p1_0615F.1_g189810 Hydrangea macrophylla HOM05D004998 ORTHO05D006104 1.6e-09 66.6 138 37.7
CSS0032367 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 2.1e-09 66.2 136 39.0
MELO3C025903.2 Cucumis melo HOM05D004998 ORTHO05D006104 2.1e-09 66.2 131 39.7
QL01p031100 Quercus lobata HOM05D004998 ORTHO05D006104 2.1e-09 66.2 140 40.0
SalBow3G1756 Salvia bowleyana HOM05D004998 ORTHO05D006104 2.1e-09 66.2 142 40.1
Atru.chr3.3979 Acer truncatum HOM05D004998 ORTHO05D006104 2.8e-09 65.9 139 38.8
Actinidia34418 Actinidia chinensis HOM05D004998 ORTHO05D006104 3.7e-09 65.5 141 37.6
ClCG02G020020 Citrullus lanatus HOM05D004998 ORTHO05D006104 6.2e-09 64.7 140 37.1
arahy.Tifrunner.gnm1.ann1.AD2TJP Arachis hypogaea HOM05D004998 ORTHO05D006104 8.2e-09 64.3 139 41.7
Actinidia23927 Actinidia chinensis HOM05D004998 ORTHO05D006104 1.1e-08 63.9 138 36.2
Cfa011521 Carpinus fangiana HOM05D004998 ORTHO05D006104 1.1e-08 63.9 137 38.0
Lalb_Chr03g0026531 Lupinus albus HOM05D004998 ORTHO05D006104 1.1e-08 63.9 134 40.3
TWI79G0863 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 1.1e-08 63.9 142 39.4
VMungo1080G1028 Vigna mungo HOM05D004998 ORTHO05D006104 1.1e-08 63.9 142 38.0
arahy.Tifrunner.gnm1.ann1.JSTV8M Arachis hypogaea HOM05D004998 ORTHO05D006104 1.4e-08 63.5 139 41.7
Glyma.13G337700 Glycine max HOM05D004998 ORTHO05D006104 1.4e-08 63.5 141 37.6
TAR633G0520 Trochodendron aralioides HOM05D004998 ORTHO05D006104 1.4e-08 63.5 144 31.2
CiPaw.13G091800 Carya illinoinensis HOM05D004998 ORTHO05D006104 1.8e-08 63.2 130 39.2
CiPaw.14G067400 Carya illinoinensis HOM05D004998 ORTHO05D006104 2.4e-08 62.8 140 37.9
Sabra09G0023800 Salix brachista HOM05D004998 ORTHO05D006104 2.4e-08 62.8 130 38.5
Sc12g0001370 Simmondsia chinensis HOM05D004998 ORTHO05D006104 2.4e-08 62.8 132 36.4
Prupe.6G073200 Prunus persica HOM05D004998 ORTHO05D006104 3.1e-08 62.4 137 38.7
Thecc.09G318900 Theobroma cacao HOM05D004998 ORTHO05D006104 3.1e-08 62.4 134 36.6
TAR636G1117 Trochodendron aralioides HOM05D004998 ORTHO05D006104 3.1e-08 62.4 142 38.0
Glyma.15G036800 Glycine max HOM05D004998 ORTHO05D006104 4.0e-08 62.0 143 38.5
HanXRQChr12g0374241 Helianthus annuus HOM05D004998 ORTHO05D006104 4.0e-08 62.0 135 38.5
MD03G1088800 Malus domestica HOM05D004998 ORTHO05D006104 4.0e-08 62.0 138 37.0
Duzib150G0269 Durio zibethinus HOM05D004998 ORTHO05D006104 5.3e-08 61.6 134 39.6
MD11G1097800 Malus domestica HOM05D004998 ORTHO05D006104 5.3e-08 61.6 138 37.0
ATR0559G067 Amborella trichopoda HOM05D004998 ORTHO05D006104 6.9e-08 61.2 133 33.8
Rhsim13G0078800 Rhododendron simsii HOM05D004998 ORTHO05D006104 6.9e-08 61.2 136 36.0
Gohir.A05G094300 Gossypium hirsutum HOM05D004998 ORTHO05D006104 9.0e-08 60.8 132 37.9
HanXRQChr07g0197281 Helianthus annuus HOM05D004998 ORTHO05D006104 1.5e-07 60.1 135 39.3
THA.LOC104810769 Tarenaya hassleriana HOM05D004998 ORTHO05D006104 1.5e-07 60.1 137 33.6
EL10Ac7g16043 Beta vulgaris HOM05D004998 ORTHO05D006104 2.6e-07 59.3 139 35.3
Duzib168G2185 Durio zibethinus HOM05D004998 ORTHO05D006104 2.6e-07 59.3 138 36.2
Phvul.L006843 Phaseolus vulgaris HOM05D004998 ORTHO05D006104 2.6e-07 59.3 141 36.2
Aqoxy1G00915 Aquilegia oxysepala HOM05D004998 ORTHO05D006104 3.4e-07 58.9 144 34.7
Ah.08g219770 Amaranthus hybridus HOM05D004998 ORTHO05D006104 4.5e-07 58.5 147 35.4
FvH4_3g36750 Fragaria vesca HOM05D004998 ORTHO05D006104 5.8e-07 58.2 136 39.7
AL8G35930 Arabidopsis lyrata HOM05D004998 ORTHO05D006104 7.6e-07 57.8 140 37.1
AT5G59460 Arabidopsis thaliana HOM05D004998 ORTHO05D006104 7.6e-07 57.8 139 38.1
COL.COLO4_18543 Corchorus olitorius HOM05D004998 ORTHO05D006104 1.0e-06 57.4 137 35.8
Gohir.D03G123600 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.0e-06 57.4 124 41.1
Lj3g0014072 Lotus japonicus HOM05D004998 ORTHO05D006104 1.0e-06 57.4 139 35.3
Carub.0008s2013 Capsella rubella HOM05D004998 ORTHO05D006104 1.3e-06 57.0 138 36.2
MBI14_g12121_MAGBIO Magnolia biondii HOM05D004998 ORTHO05D006104 1.3e-06 57.0 138 34.1
Oeu002429.1 Olea europaea HOM05D004998 ORTHO05D006104 1.3e-06 57.0 56 58.9
vmacro03047 Vaccinium macrocarpon HOM05D004998 ORTHO05D006104 1.3e-06 57.0 136 35.3
Aa31LG4G15620 Aethionema arabicum HOM05D004998 ORTHO05D006104 1.7e-06 56.6 128 33.6
CARHR285830 Cardamine hirsuta HOM05D004998 ORTHO05D006104 1.7e-06 56.6 135 35.6
Nitab4.5_0000272g0050 Nicotiana tabacum HOM05D004998 ORTHO05D006104 2.2e-06 56.2 137 35.0
Medtr2g097480 Medicago truncatula HOM05D004998 ORTHO05D006104 2.9e-06 55.8 143 35.7
Peaxi162Scf00122g01415 Petunia axillaris HOM05D004998 ORTHO05D006104 3.8e-06 55.5 144 34.0
RcHm_v2.0_Chr5g0065711 Rosa chinensis HOM05D004998 ORTHO05D006104 3.8e-06 55.5 136 37.5
FAN16G3214 Fragaria x ananassa HOM05D004998 ORTHO05D006104 4.9e-06 55.1 141 40.4
PGR102G0830 Punica granatum HOM05D004998 ORTHO05D006104 4.9e-06 55.1 133 39.1
PGSC0003DMG400002149 Solanum tuberosum HOM05D004998 ORTHO05D006104 4.9e-06 55.1 141 35.5
Dinv06259 Davidia involucrata HOM05D004998 ORTHO05D006104 6.5e-06 54.7 46 54.3
Gohir.A03G043800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 6.5e-06 54.7 121 39.7


User provided reference genes

Program Settings