Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12641 Utricularia gibba HOM05D000518 ORTHO05D001974 1.3e-58 229.6 118 100.0
SGA_v2.0_scaffold63G21787 Striga asiatica HOM05D000518 ORTHO05D001974 8.4e-18 94.0 99 51.5
Migut.K00404 Erythranthe guttata HOM05D000518 ORTHO05D001974 2.4e-17 92.4 102 51.0
SalBow1G2075 Salvia bowleyana HOM05D000518 ORTHO05D001974 7.1e-17 90.9 105 51.4
Oeu055943.1 Olea europaea HOM05D000518 ORTHO05D001974 2.7e-16 89.0 53 73.6
Oeu052739.1 Olea europaea HOM05D000518 ORTHO05D001974 4.6e-16 88.2 94 57.4
Oeu000529.1 Olea europaea HOM05D000518 ORTHO05D001974 1.3e-15 86.7 103 49.5
MSTRG.26333 Avicennia marina HOM05D000518 ORTHO05D001974 3.9e-15 85.1 88 55.7
CAN.G467.19 Capsicum annuum HOM05D000518 ORTHO05D001974 7.4e-14 80.9 56 62.5
Cc06_g07760 Coffea canephora HOM05D000518 ORTHO05D001974 7.4e-14 80.9 104 47.1
TAR636G0896 Trochodendron aralioides HOM05D000518 ORTHO05D001974 2.1e-13 79.3 53 62.3
DCAR_014910 Daucus carota HOM05D000518 ORTHO05D001974 2.8e-13 79.0 91 48.4
SalBow6G0971 Salvia bowleyana HOM05D000518 ORTHO05D001974 3.7e-13 78.6 68 58.8
Nitab4.5_0003587g0010 Nicotiana tabacum HOM05D000518 ORTHO05D001974 6.2e-13 77.8 70 55.7
TWI18G0142 Tripterygium wilfordii HOM05D000518 ORTHO05D001974 6.2e-13 77.8 62 62.9
GSVIVG01017448001 Vitis vinifera HOM05D000518 ORTHO05D001974 1.1e-12 77.0 54 63.0
PGR031G0754 Punica granatum HOM05D000518 ORTHO05D001974 1.4e-12 76.6 55 60.0
TAR625G0378 Trochodendron aralioides HOM05D000518 ORTHO05D001974 1.4e-12 76.6 48 66.7
Nitab4.5_0000704g0080 Nicotiana tabacum HOM05D000518 ORTHO05D001974 3.1e-12 75.5 70 55.7
TWI12G0497 Tripterygium wilfordii HOM05D000518 ORTHO05D001974 3.1e-12 75.5 48 68.8
CDE02G3955 Ceratophyllum demersum HOM05D000518 ORTHO05D001974 4.0e-12 75.1 63 55.6
Dinv42491 Davidia involucrata HOM05D000518 ORTHO05D001974 4.0e-12 75.1 56 58.9
PSO832G1716 Papaver somniferum HOM05D000518 ORTHO05D001974 4.0e-12 75.1 61 55.7
ATR0757G202 Amborella trichopoda HOM05D000518 ORTHO05D001974 6.9e-12 74.3 48 66.7
Dinv36455 Davidia involucrata HOM05D000518 ORTHO05D001974 6.9e-12 74.3 48 68.8
Dinv41451 Davidia involucrata HOM05D000518 ORTHO05D001974 6.9e-12 74.3 72 50.0
Glyma.05G014000 Glycine max HOM05D000518 ORTHO05D001974 6.9e-12 74.3 48 62.5
Peaxi162Scf00088g00085 Petunia axillaris HOM05D000518 ORTHO05D001974 6.9e-12 74.3 74 51.4
Sopen07g003580 Solanum pennellii HOM05D000518 ORTHO05D001974 6.9e-12 74.3 48 66.7
PGSC0003DMG400030683 Solanum tuberosum HOM05D000518 ORTHO05D001974 6.9e-12 74.3 75 52.0
Ciclev10025846m.g Citrus clementina HOM05D000518 ORTHO05D001974 9.0e-12 73.9 64 59.4
MELO3C004475.2 Cucumis melo HOM05D000518 ORTHO05D001974 9.0e-12 73.9 58 62.1
CsaV3_2G003300 Cucumis sativus L. HOM05D000518 ORTHO05D001974 9.0e-12 73.9 48 66.7
Solyc07g007590.1 Solanum lycopersicum HOM05D000518 ORTHO05D001974 9.0e-12 73.9 75 52.0
AL1G27820 Arabidopsis lyrata HOM05D000518 ORTHO05D001974 1.2e-11 73.6 82 50.0
A09p61260 Brassica napus HOM05D000518 ORTHO05D000737 1.2e-11 73.6 72 51.4
BraA09t41497Z Brassica rapa HOM05D000518 ORTHO05D001974 1.2e-11 73.6 72 51.4
CANSAT11G0609 Cannabis sativa HOM05D000518 ORTHO05D001974 1.5e-11 73.2 67 58.2
Glyma.17G122300 Glycine max HOM05D000518 ORTHO05D001974 1.5e-11 73.2 48 60.4
Gohir.D05G123100 Gossypium hirsutum HOM05D000518 ORTHO05D001974 1.5e-11 73.2 105 42.9
Gorai.009G126800 Gossypium raimondii HOM05D000518 ORTHO05D001974 1.5e-11 73.2 105 42.9
Nn8g39611 Nelumbo nucifera HOM05D000518 ORTHO05D001974 1.5e-11 73.2 54 57.4
PSO210G1576 Papaver somniferum HOM05D000518 ORTHO05D001974 1.5e-11 73.2 61 54.1
AT1G15710 Arabidopsis thaliana HOM05D000518 ORTHO05D001974 2.0e-11 72.8 68 55.9
BcaB03g14527 Brassica carinata HOM05D000518 ORTHO05D001974 2.0e-11 72.8 75 50.7
BcaC07g41484 Brassica carinata HOM05D000518 ORTHO05D001974 2.0e-11 72.8 75 49.3
C08p44820 Brassica napus HOM05D000518 ORTHO05D000737 2.0e-11 72.8 75 49.3
BolC8t52027H Brassica oleracea HOM05D000518 ORTHO05D000737 2.0e-11 72.8 75 49.3
ClCG11G003430 Citrullus lanatus HOM05D000518 ORTHO05D001974 2.0e-11 72.8 48 64.6
Thhalv10008067m.g Eutrema salsugineum HOM05D000518 ORTHO05D001974 2.0e-11 72.8 68 55.9
CDE05G0214 Ceratophyllum demersum HOM05D000518 ORTHO05D001974 2.6e-11 72.4 91 42.9
Lj4g0010167 Lotus japonicus HOM05D000518 ORTHO05D001974 2.6e-11 72.4 48 62.5
PSO384G2860 Papaver somniferum HOM05D000518 ORTHO05D001974 2.6e-11 72.4 79 48.1
Actinidia07339 Actinidia chinensis HOM05D000518 ORTHO05D001974 3.4e-11 72.0 86 48.8
Gohir.A05G122200 Gossypium hirsutum HOM05D000518 ORTHO05D001974 3.4e-11 72.0 97 45.4
Medtr4g115980 Medicago truncatula HOM05D000518 ORTHO05D001974 3.4e-11 72.0 48 62.5
Nn2g12171 Nelumbo nucifera HOM05D000518 ORTHO05D001974 4.5e-11 71.6 70 52.9
THA.LOC104808204 Tarenaya hassleriana HOM05D000518 ORTHO05D001974 4.5e-11 71.6 50 64.0
HanXRQChr03g0062951 Helianthus annuus HOM05D000518 ORTHO05D001974 5.8e-11 71.2 50 60.0
MD17G1215800 Malus domestica HOM05D000518 ORTHO05D001974 5.8e-11 71.2 99 41.4
Sp1g14010 Schrenkiella parvula HOM05D000518 ORTHO05D001974 5.8e-11 71.2 80 50.0
Aqoxy7G03067 Aquilegia oxysepala HOM05D000518 ORTHO05D001974 7.6e-11 70.9 98 38.8
Eucgr.J03082 Eucalyptus grandis HOM05D000518 ORTHO05D001974 7.6e-11 70.9 94 48.9
Phvul.003G178200 Phaseolus vulgaris HOM05D000518 ORTHO05D001974 9.9e-11 70.5 48 56.2
VMungo1215G2512 Vigna mungo HOM05D000518 ORTHO05D001974 9.9e-11 70.5 70 48.6
CSS0012905 Camellia sinensis var. sinensis HOM05D000518 ORTHO05D001974 1.3e-10 70.1 48 62.5
MBI04_g32785_MAGBIO Magnolia biondii HOM05D000518 ORTHO05D001974 1.3e-10 70.1 48 62.5
Os06g0708832 Oryza sativa ssp. japonica HOM05D000518 ORTHO05D001974 1.3e-10 70.1 56 53.6
Rhsim01G0055700 Rhododendron simsii HOM05D000518 ORTHO05D001974 1.3e-10 70.1 59 59.3
Aa31LG7G340 Aethionema arabicum HOM05D000518 ORTHO05D001974 1.7e-10 69.7 80 48.8
Carub.0001s1548 Capsella rubella HOM05D000518 ORTHO05D001974 1.7e-10 69.7 68 54.4
Lalb_Chr07g0179351 Lupinus albus HOM05D000518 ORTHO05D001974 1.7e-10 69.7 72 48.6
Psat4g034640 Pisum sativum HOM05D000518 ORTHO05D001974 2.9e-10 68.9 70 51.4
Duzib235G0033 Durio zibethinus HOM05D000518 ORTHO05D001974 3.8e-10 68.6 54 55.6
Prupe.3G092000 Prunus persica HOM05D000518 ORTHO05D001974 3.8e-10 68.6 99 38.4
Sabra01G0158900 Salix brachista HOM05D000518 ORTHO05D001974 3.8e-10 68.6 48 62.5
Thecc.06G032000 Theobroma cacao HOM05D000518 ORTHO05D001974 3.8e-10 68.6 47 61.7
Cpa.g.sc10.155 Carica papaya HOM05D000518 ORTHO05D001974 4.9e-10 68.2 66 51.5
CiPaw.03G251100 Carya illinoinensis HOM05D000518 ORTHO05D001974 4.9e-10 68.2 58 58.6
Ca_21643_v3 Cicer arietinum L. HOM05D000518 ORTHO05D001974 4.9e-10 68.2 62 51.6
FAN23G2519 Fragaria x ananassa HOM05D000518 ORTHO05D001974 4.9e-10 68.2 61 57.4
THA.LOC104812465 Tarenaya hassleriana HOM05D000518 ORTHO05D001974 4.9e-10 68.2 69 53.6
arahy.Tifrunner.gnm1.ann1.SMP34R Arachis hypogaea HOM05D000518 ORTHO05D001974 6.4e-10 67.8 65 47.7
Cpa.g.sc277.10 Carica papaya HOM05D000518 ORTHO05D001974 6.4e-10 67.8 50 58.0
FvH4_1g02170 Fragaria vesca HOM05D000518 ORTHO05D001974 6.4e-10 67.8 51 60.8
FAN19G1455 Fragaria x ananassa HOM05D000518 ORTHO05D001974 6.4e-10 67.8 51 60.8
FAN28G2628 Fragaria x ananassa HOM05D000518 ORTHO05D001974 6.4e-10 67.8 51 60.8
Lsat_1_v5_gn_7_44561 Lactuca sativa HOM05D000518 ORTHO05D001974 6.4e-10 67.8 80 45.0
MBI03_g34596_MAGBIO Magnolia biondii HOM05D000518 ORTHO05D001974 6.4e-10 67.8 48 58.3
Pp3c8_7360 Physcomitrium patens HOM05D000518 ORTHO05D001974 6.4e-10 67.8 65 47.7
Sed0024602 Sechium edule HOM05D000518 ORTHO05D001974 6.4e-10 67.8 58 55.2
SMO351G0089 Selaginella moellendorffii HOM05D000518 ORTHO05D001974 6.4e-10 67.8 48 58.3
vmacro07742 Vaccinium macrocarpon HOM05D000518 ORTHO05D001974 6.4e-10 67.8 48 64.6
CiPaw.04G177000 Carya illinoinensis HOM05D000518 ORTHO05D001974 8.4e-10 67.4 63 55.6
Manes.04G109800 Manihot esculenta HOM05D000518 ORTHO05D001974 8.4e-10 67.4 48 62.5
Prupe.7G250700 Prunus persica HOM05D000518 ORTHO05D001974 8.4e-10 67.4 54 53.7
RcHm_v2.0_Chr2g0087271 Rosa chinensis HOM05D000518 ORTHO05D001974 8.4e-10 67.4 48 62.5
SEGI_32617 Sequoiadendron giganteum HOM05D000518 ORTHO05D001974 8.4e-10 67.4 95 41.1
Thecc.09G135900 Theobroma cacao HOM05D000518 ORTHO05D001974 8.4e-10 67.4 48 58.3
CARHR016200 Cardamine hirsuta HOM05D000518 ORTHO05D001974 1.1e-09 67.0 59 54.2
Nn6g33337 Nelumbo nucifera HOM05D000518 ORTHO05D001974 1.1e-09 67.0 48 62.5
ATR0620G035 Amborella trichopoda HOM05D000518 ORTHO05D001974 1.4e-09 66.6 48 58.3
Aqoxy7G03065 Aquilegia oxysepala HOM05D000518 ORTHO05D001974 1.4e-09 66.6 98 38.8
Potri.001G201100 Populus trichocarpa HOM05D000518 ORTHO05D001974 1.4e-09 66.6 55 54.5
COL.COLO4_11864 Corchorus olitorius HOM05D000518 ORTHO05D001974 1.9e-09 66.2 57 52.6
Haze_25456 Corylus avellana HOM05D000518 ORTHO05D001974 1.9e-09 66.2 49 69.4
Hma1.2p1_0182F.1_g080170 Hydrangea macrophylla HOM05D000518 ORTHO05D001974 1.9e-09 66.2 86 44.2
Cpa.g.sc10.153 Carica papaya HOM05D000518 ORTHO05D001974 2.4e-09 65.9 68 50.0
Zm00001eb227480 Zea mays HOM05D000518 ORTHO05D001974 2.4e-09 65.9 85 41.2
arahy.Tifrunner.gnm1.ann1.QY1ES2 Arachis hypogaea HOM05D000518 ORTHO05D001974 4.2e-09 65.1 64 50.0
SEGI_19585 Sequoiadendron giganteum HOM05D000518 ORTHO05D001974 4.2e-09 65.1 95 40.0
SEGI_35178 Sequoiadendron giganteum HOM05D000518 ORTHO05D001974 4.2e-09 65.1 95 40.0
MD02G1020800 Malus domestica HOM05D000518 ORTHO05D001974 5.5e-09 64.7 56 51.8
Pp3c3_31560 Physcomitrium patens HOM05D000518 ORTHO05D001974 7.1e-09 64.3 65 44.6
Ca_21644_v3 Cicer arietinum L. HOM05D000518 ORTHO05D001974 1.2e-08 63.5 48 56.2
RcHm_v2.0_Chr2g0134521 Rosa chinensis HOM05D000518 ORTHO05D001974 1.2e-08 63.5 99 35.4
PGSC0003DMG400042196 Solanum tuberosum HOM05D000518 ORTHO05D001974 1.2e-08 63.5 60 50.0
Lj7A438G55 Lonicera japonica HOM05D000518 ORTHO05D001974 1.6e-08 63.2 43 62.8
arahy.Tifrunner.gnm1.ann1.2K29ML Arachis hypogaea HOM05D000518 ORTHO05D001974 2.1e-08 62.8 76 47.4
Cre06.g278350 Chlamydomonas reinhardtii HOM05D000518 ORTHO05D001974 2.1e-08 62.8 86 43.0
THA.LOC104826560 Tarenaya hassleriana HOM05D000518 ORTHO05D001974 2.1e-08 62.8 47 63.8
Lsat_1_v5_gn_9_101761 Lactuca sativa HOM05D000518 ORTHO05D001974 2.7e-08 62.4 53 47.2
HPP92_016992 Vanilla planifolia HOM05D000518 ORTHO05D001974 2.7e-08 62.4 54 53.7
AagrBONN_evm.TU.Sc2ySwM_117.1874 Anthoceros agrestis HOM05D000518 ORTHO05D001974 3.5e-08 62.0 97 41.2
HPP92_017007 Vanilla planifolia HOM05D000518 ORTHO05D001974 3.5e-08 62.0 54 55.6
Manes.14G118400 Manihot esculenta HOM05D000518 ORTHO05D001974 6.0e-08 61.2 43 62.8
Sp7g07340 Schrenkiella parvula HOM05D000518 ORTHO05D001974 6.0e-08 61.2 60 48.3
Sc08g0006130 Simmondsia chinensis HOM05D000518 ORTHO05D001974 6.0e-08 61.2 52 57.7
Ah.09g224550 Amaranthus hybridus HOM05D000518 ORTHO05D001974 7.9e-08 60.8 61 45.9
Psat4g034680 Pisum sativum HOM05D000518 ORTHO05D001974 7.9e-08 60.8 81 43.2
QL02p090423 Quercus lobata HOM05D000518 ORTHO05D001974 1.0e-07 60.5 85 45.9
CBR_g49487 Chara braunii HOM05D000518 ORTHO05D001974 1.3e-07 60.1 46 56.5
Pp3c12_25380 Physcomitrium patens HOM05D000518 ORTHO05D001974 2.3e-07 59.3 64 46.9
SEGI_07548 Sequoiadendron giganteum HOM05D000518 ORTHO05D001974 2.3e-07 59.3 45 55.6
AUR62011211 Chenopodium quinoa HOM05D000518 ORTHO05D001974 3.0e-07 58.9 55 49.1
Prupe.3G127100 Prunus persica HOM05D000518 ORTHO05D001974 3.9e-07 58.5 44 56.8
Gohir.D06G051400 Gossypium hirsutum HOM05D000518 ORTHO05D001974 5.1e-07 58.2 48 47.9
Gorai.010G059700 Gossypium raimondii HOM05D000518 ORTHO05D001974 5.1e-07 58.2 48 47.9
Thhalv10020287m.g Eutrema salsugineum HOM05D000518 ORTHO05D001974 6.7e-07 57.8 48 52.1
Duzib187G0120 Durio zibethinus HOM05D000518 ORTHO05D000737 8.7e-07 57.4 48 45.8
Mapoly0031s0116 Marchantia polymorpha HOM05D000518 ORTHO05D001974 8.7e-07 57.4 46 47.8
AUR62013276 Chenopodium quinoa HOM05D000518 ORTHO05D001974 1.1e-06 57.0 110 34.5
COL.COLO4_33380 Corchorus olitorius HOM05D000518 ORTHO05D001974 1.1e-06 57.0 52 46.2
COL.COLO4_33383 Corchorus olitorius HOM05D000518 ORTHO05D001974 1.9e-06 56.2 41 56.1
Potri.006G062600 Populus trichocarpa HOM05D000518 ORTHO05D001974 1.9e-06 56.2 48 54.2
Duzib168G1275 Durio zibethinus HOM05D000518 ORTHO05D001974 3.3e-06 55.5 40 55.0
arahy.Tifrunner.gnm1.ann1.ZI073W Arachis hypogaea HOM05D000518 ORTHO05D082630 4.3e-06 55.1 44 59.1
Ciclev10007630m.g Citrus clementina HOM05D000518 ORTHO05D001974 4.3e-06 55.1 72 44.4
GSVIVG01017443001 Vitis vinifera HOM05D000518 ORTHO05D001974 4.3e-06 55.1 54 44.4
Thecc.09G136200 Theobroma cacao HOM05D000518 ORTHO05D001974 5.6e-06 54.7 48 47.9
TPR.G8006 Trifolium pratense HOM05D000518 ORTHO05D001974 5.6e-06 54.7 37 62.2
CANSAT56G1850 Cannabis sativa HOM05D000518 ORTHO05D001974 7.4e-06 54.3 49 53.1
PGR102G2035 Punica granatum HOM05D000518 ORTHO05D001974 7.4e-06 54.3 49 57.1
Sabra06G0045100 Salix brachista HOM05D000518 ORTHO05D001974 7.4e-06 54.3 48 52.1


User provided reference genes

Program Settings