Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12589 Utricularia gibba HOM05D005171 ORTHO05D006343 0.0e+00 2395.2 1213 100.0
SGA_v2.0_scaffold181G39698 Striga asiatica HOM05D005171 ORTHO05D006343 1.4e-131 475.3 1372 32.0
Migut.M00063 Erythranthe guttata HOM05D005171 ORTHO05D006343 3.6e-124 450.7 1350 32.0
SalBow7G0294 Salvia bowleyana HOM05D005171 ORTHO05D006343 3.4e-106 391.0 1171 31.0
Oeu056856.1 Olea europaea HOM05D005171 ORTHO05D006343 2.4e-104 384.8 1356 31.0
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 2.4e-83 315.1 1398 28.0
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 4.4e-77 294.3 1336 27.8
COL.COLO4_19656 Corchorus olitorius HOM05D005171 ORTHO05D006343 7.7e-74 283.5 1303 26.0
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 7.2e-72 276.9 1381 25.6
CSS0016995 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 6.1e-71 273.9 1220 27.2
Potri.001G315950 Populus trichocarpa HOM05D005171 ORTHO05D006343 1.8e-70 272.3 1392 25.4
Rhsim06G0179100 Rhododendron simsii HOM05D005171 ORTHO05D006343 2.3e-70 271.9 1318 26.6
CSS0020778 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 1.1e-69 269.6 1220 27.0
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 2.0e-69 268.9 1447 24.6
Peaxi162Scf00359g00324 Petunia axillaris HOM05D005171 ORTHO05D006343 2.6e-69 268.5 1340 25.2
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 9.7e-69 266.5 1298 27.0
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 1.3e-68 266.2 1264 26.4
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 1.3e-68 266.2 1464 25.5
Solyc07g045170.3 Solanum lycopersicum HOM05D005171 ORTHO05D006343 3.1e-67 261.5 1391 26.1
Sopen07g023720 Solanum pennellii HOM05D005171 ORTHO05D006343 3.1e-67 261.5 1391 26.3
DCAR_012742 Daucus carota HOM05D005171 ORTHO05D006343 1.2e-66 259.6 1341 25.7
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 4.5e-66 257.7 1398 26.2
HanXRQChr13g0389891 Helianthus annuus HOM05D005171 ORTHO05D006343 1.6e-63 249.2 1213 27.0
GSVIVG01030128001 Vitis vinifera HOM05D005171 ORTHO05D006343 6.1e-63 247.3 1126 26.7
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 1.4e-62 246.1 1251 27.0
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 1.4e-62 246.1 1404 27.0
Sc20g0003130 Simmondsia chinensis HOM05D005171 ORTHO05D006343 3.0e-62 245.0 1356 25.6
Nitab4.5_0003086g0060 Nicotiana tabacum HOM05D005171 ORTHO05D006343 4.4e-61 241.1 1364 24.9
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 5.7e-61 240.7 1470 24.8
TWI36G0325 Tripterygium wilfordii HOM05D005171 ORTHO05D006343 3.7e-60 238.0 1399 24.5
Gorai.007G164500 Gossypium raimondii HOM05D005171 ORTHO05D006343 1.8e-59 235.7 1398 24.9
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 9.1e-59 233.4 1365 25.6
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 7.7e-58 230.3 1452 25.1
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 2.9e-57 228.4 1396 24.8
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 5.0e-57 227.6 1369 25.7
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 6.5e-57 227.3 1371 25.5
Cc05_g01980 Coffea canephora HOM05D005171 ORTHO05D006343 1.5e-56 226.1 1344 26.2
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 5.5e-56 224.2 1345 25.5
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 7.2e-56 223.8 1366 26.1
HanXRQChr09g0257391 Helianthus annuus HOM05D005171 ORTHO05D006343 2.7e-55 221.9 1192 25.8
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 4.7e-55 221.1 1348 25.6
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 1.8e-54 219.2 1400 24.9
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 3.0e-54 218.4 1436 24.0
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 1.5e-53 216.1 1391 25.0
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 4.4e-53 214.5 1420 25.2
Lj6g0011858 Lotus japonicus HOM05D005171 ORTHO05D006343 1.3e-52 213.0 1267 25.1
Aa31sc733G10 Aethionema arabicum HOM05D005171 ORTHO05D006343 1.7e-52 212.6 1257 26.1
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 1.7e-52 212.6 1339 25.5
Ca_16333_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 5.4e-51 207.6 1268 25.1
Ca_30417_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 5.4e-51 207.6 1268 25.1
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 9.1e-51 206.8 1410 24.4
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 3.5e-50 204.9 1384 24.1
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 2.5e-48 198.7 1355 24.7
Gohir.D08G059000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.2e-47 196.4 415 32.5
Gorai.004G060900 Gossypium raimondii HOM05D005171 ORTHO05D006343 1.6e-47 196.1 415 32.5
Haze_12584 Corylus avellana HOM05D005171 ORTHO05D006343 2.8e-47 195.3 1419 23.3
Gohir.D11G154400 Gossypium hirsutum HOM05D005171 ORTHO05D006343 6.1e-47 194.1 424 32.5
THA.LOC104815372 Tarenaya hassleriana HOM05D005171 ORTHO05D006343 8.0e-47 193.7 1318 23.7
Thhalv10002382m.g Eutrema salsugineum HOM05D005171 ORTHO05D006343 6.8e-46 190.7 1218 24.9
Ah.10g032550 Amaranthus hybridus HOM05D005171 ORTHO05D006343 8.8e-46 190.3 1270 24.7
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea HOM05D005171 ORTHO05D006343 1.5e-45 189.5 1248 23.6
EL10Ac2g03228 Beta vulgaris HOM05D005171 ORTHO05D006343 2.6e-45 188.7 1326 24.1
Sp3g23130 Schrenkiella parvula HOM05D005171 ORTHO05D006343 2.6e-45 188.7 1246 24.6
A07p06800 Brassica napus HOM05D005171 ORTHO05D006343 3.4e-45 188.3 1260 25.5
Dinv05326 Davidia involucrata HOM05D005171 ORTHO05D006343 3.4e-45 188.3 417 33.3
AUR62037747 Chenopodium quinoa HOM05D005171 ORTHO05D006343 4.4e-45 188.0 1394 24.4
arahy.Tifrunner.gnm1.ann1.DUBF95 Arachis hypogaea HOM05D005171 ORTHO05D006343 7.5e-45 187.2 421 32.5
BraA07t28471Z Brassica rapa HOM05D005171 ORTHO05D006343 7.5e-45 187.2 1237 24.8
C07p10370 Brassica napus HOM05D005171 ORTHO05D006343 9.8e-45 186.8 1237 24.9
Eucgr.A01375 Eucalyptus grandis HOM05D005171 ORTHO05D006343 9.8e-45 186.8 413 30.5
Glyma.13G008500 Glycine max HOM05D005171 ORTHO05D006343 1.3e-44 186.4 1288 24.1
TAR627G0484 Trochodendron aralioides HOM05D005171 ORTHO05D006343 1.7e-44 186.0 369 35.0
Lsat_1_v5_gn_7_97220 Lactuca sativa HOM05D005171 ORTHO05D006343 2.2e-44 185.7 1189 26.1
AUR62018228 Chenopodium quinoa HOM05D005171 ORTHO05D006343 2.8e-44 185.3 1393 24.1
Psat5g105360 Pisum sativum HOM05D005171 ORTHO05D006343 6.3e-44 184.1 414 30.9
Aqoxy1G04295 Aquilegia oxysepala HOM05D005171 ORTHO05D006343 1.1e-43 183.3 1227 25.4
arahy.Tifrunner.gnm1.ann1.DEY0FQ Arachis hypogaea HOM05D005171 ORTHO05D006343 1.4e-43 183.0 393 33.1
BcaC06g35856 Brassica carinata HOM05D005171 ORTHO05D006343 1.4e-43 183.0 1232 24.7
BolC7t41487H Brassica oleracea HOM05D005171 ORTHO05D006343 1.4e-43 183.0 1232 24.7
CDE01G0402 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 1.4e-43 183.0 1335 24.4
Nitab4.5_0004941g0030 Nicotiana tabacum HOM05D005171 ORTHO05D006343 5.4e-43 181.0 420 31.2
Glyma.20G060900 Glycine max HOM05D005171 ORTHO05D006343 4.5e-42 177.9 418 29.9
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 7.8e-42 177.2 1304 25.1
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 1.0e-41 176.8 1357 23.4
AL3G41930 Arabidopsis lyrata HOM05D005171 ORTHO05D006343 1.7e-41 176.0 1273 23.3
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 3.8e-41 174.9 1258 25.0
HPP92_000125 Vanilla planifolia HOM05D005171 ORTHO05D006343 8.6e-41 173.7 1217 21.9
Ciclev10014049m.g Citrus clementina HOM05D005171 ORTHO05D006343 7.3e-40 170.6 1413 23.0
VMungo0540G0527 Vigna mungo HOM05D005171 ORTHO05D006343 2.8e-39 168.7 1266 24.5
Cpa.g.sc136.57 Carica papaya HOM05D005171 ORTHO05D006343 4.0e-38 164.9 1224 24.3
VMungo0331G1557 Vigna mungo HOM05D005171 ORTHO05D006343 2.0e-37 162.5 405 28.9
ECA240G4228 Erigeron canadensis HOM05D005171 ORTHO05D006343 9.8e-37 160.2 405 31.9
AT2G04235 Arabidopsis thaliana HOM05D005171 ORTHO05D006343 1.3e-36 159.8 1269 23.1
MBI14_g37363_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 1.3e-36 159.8 1421 22.8
Phvul.006G005000 Phaseolus vulgaris HOM05D005171 ORTHO05D006343 1.7e-36 159.5 1227 24.3
Lsat_1_v5_gn_9_102901 Lactuca sativa HOM05D005171 ORTHO05D006343 4.9e-36 157.9 411 30.7
PSO541G4744 Papaver somniferum HOM05D005171 ORTHO05D006343 1.4e-35 156.4 415 28.7
MBI14_g33664_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 3.5e-34 151.8 304 33.6
arahy.Tifrunner.gnm1.ann1.CJRH42 Arachis hypogaea HOM05D005171 ORTHO05D006343 6.6e-33 147.5 481 26.0
CiPaw.03G284100 Carya illinoinensis HOM05D005171 ORTHO05D006343 4.7e-31 141.4 334 29.9
MELO3C024178.2 Cucumis melo HOM05D005171 ORTHO05D006343 8.0e-31 140.6 1294 24.0
TAR627G0657 Trochodendron aralioides HOM05D005171 ORTHO05D006343 8.9e-30 137.1 343 34.4
Hma1.2p1_0629F.1_g192130 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 4.1e-27 128.3 309 31.4
Zm00001eb386590 Zea mays HOM05D005171 ORTHO05D006343 3.5e-26 125.2 1215 21.4
PSO478G2888 Papaver somniferum HOM05D005171 ORTHO05D006343 1.3e-25 123.2 352 27.0
Carub.0003s2593 Capsella rubella HOM05D005171 ORTHO05D006343 3.3e-24 118.6 277 35.0
Gohir.A11G147500 Gossypium hirsutum HOM05D005171 ORTHO05D006343 9.5e-24 117.1 379 28.2
ATR0751G269 Amborella trichopoda HOM05D005171 ORTHO05D006343 1.2e-23 116.7 374 28.1
Dinv21324 Davidia involucrata HOM05D005171 ORTHO05D006343 2.8e-23 115.5 160 43.1
PSO017G5154 Papaver somniferum HOM05D005171 ORTHO05D006343 6.2e-23 114.4 1294 22.6
TPR.G27424 Trifolium pratense HOM05D005171 ORTHO05D006343 3.4e-21 108.6 241 40.2
Gohir.A08G049000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 9.9e-21 107.1 300 28.7
Hma1.2p1_0629F.1_g192120 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 2.7e-18 99.0 300 33.0
arahy.Tifrunner.gnm1.ann1.AZD9M5 Arachis hypogaea HOM05D005171 ORTHO05D006343 3.5e-18 98.6 259 36.3
Os06g0608100 Oryza sativa ssp. japonica HOM05D005171 ORTHO05D006343 7.8e-18 97.4 256 32.8
PGSC0003DMG400017412 Solanum tuberosum HOM05D005171 ORTHO05D006343 1.0e-17 97.1 126 42.9
PSO675G6191 Papaver somniferum HOM05D005171 ORTHO05D006343 1.2e-15 90.1 131 41.2
Glyma.20G061000 Glycine max HOM05D005171 ORTHO05D006343 2.6e-13 82.4 222 35.6
SEGI_15711 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 9.9e-13 80.5 122 36.1
Duzib211G0583 Durio zibethinus HOM05D005171 ORTHO05D006343 6.4e-12 77.8 173 31.2
Oeu036991.1 Olea europaea HOM05D005171 ORTHO05D006343 1.4e-11 76.6 268 29.1
SalBow7G0566 Salvia bowleyana HOM05D005171 ORTHO05D006343 3.9e-09 68.6 102 50.0
CANSAT11G0838 Cannabis sativa HOM05D005171 ORTHO05D006343 6.6e-09 67.8 87 43.7
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 1.1e-08 67.0 76 44.7
PSO478G0307 Papaver somniferum HOM05D005171 ORTHO05D006343 3.3e-08 65.5 226 30.1
TPR.G30970 Trifolium pratense HOM05D005171 ORTHO05D006343 2.1e-07 62.8 175 26.3
SEGI_11604 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 9.0e-06 57.4 104 32.7


User provided reference genes

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