Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12557 Utricularia gibba HOM05D005699 ORTHO05D007496 6.7e-171 604.0 317 100.0
DCAR_013779 Daucus carota HOM05D005699 ORTHO05D007496 1.1e-104 384.0 318 65.7
Dinv13365 Davidia involucrata HOM05D005699 ORTHO05D007496 2.1e-103 379.8 273 70.7
Migut.M00694 Erythranthe guttata HOM05D005699 ORTHO05D007496 2.1e-103 379.8 331 62.2
HanXRQChr13g0389711 Helianthus annuus HOM05D005699 ORTHO05D007496 2.1e-103 379.8 273 71.8
EL10Ac4g08415 Beta vulgaris HOM05D005699 ORTHO05D007496 2.7e-103 379.4 307 66.1
ECA240G3195 Erigeron canadensis HOM05D005699 ORTHO05D007496 4.6e-103 378.6 285 68.4
Oeu010029.1 Olea europaea HOM05D005699 ORTHO05D007496 1.0e-102 377.5 268 72.0
Cc05_g10740 Coffea canephora HOM05D005699 ORTHO05D007496 1.3e-102 377.1 267 72.3
Cpa.g.sc77.58 Carica papaya HOM05D005699 ORTHO05D007496 1.6e-100 370.2 284 68.0
Potri.001G384300 Populus trichocarpa HOM05D005699 ORTHO05D007496 2.1e-100 369.8 282 69.9
Ah.04g164050 Amaranthus hybridus HOM05D005699 ORTHO05D007496 2.8e-100 369.4 303 64.0
HanXRQChr14g0439361 Helianthus annuus HOM05D005699 ORTHO05D007496 2.8e-100 369.4 323 62.2
Lj8A146G72 Lonicera japonica HOM05D005699 ORTHO05D007496 3.6e-100 369.0 308 64.9
Cfa019514 Carpinus fangiana HOM05D005699 ORTHO05D007496 4.7e-100 368.6 296 64.9
SGA_v2.0_scaffold73G24389 Striga asiatica HOM05D005699 ORTHO05D007496 6.2e-100 368.2 345 59.1
MSTRG.6687 Avicennia marina HOM05D005699 ORTHO05D007496 8.1e-100 367.9 321 61.4
TAR629G2232 Trochodendron aralioides HOM05D005699 ORTHO05D007496 8.1e-100 367.9 296 65.2
Atru.chr2.2008 Acer truncatum HOM05D005699 ORTHO05D007496 1.1e-99 367.5 282 67.7
Ciclev10021126m.g Citrus clementina HOM05D005699 ORTHO05D007496 1.8e-99 366.7 268 72.0
Peaxi162Scf00111g01334 Petunia axillaris HOM05D005699 ORTHO05D007496 4.0e-99 365.5 287 67.6
PGR083G0120 Punica granatum HOM05D005699 ORTHO05D007496 4.0e-99 365.5 285 66.7
Nitab4.5_0000347g0060 Nicotiana tabacum HOM05D005699 ORTHO05D007496 5.2e-99 365.2 309 63.4
FAN11G1539 Fragaria x ananassa HOM05D005699 ORTHO05D007496 6.9e-99 364.8 265 70.6
Nn3g21006 Nelumbo nucifera HOM05D005699 ORTHO05D007496 6.9e-99 364.8 273 68.5
Hma1.2p1_0050F.1_g028850 Hydrangea macrophylla HOM05D005699 ORTHO05D007496 1.2e-98 364.0 273 68.9
GSVIVG01014100001 Vitis vinifera HOM05D005699 ORTHO05D007496 1.5e-98 363.6 312 63.8
Actinidia12601 Actinidia chinensis HOM05D005699 ORTHO05D007496 2.0e-98 363.2 315 62.9
AUR62019646 Chenopodium quinoa HOM05D005699 ORTHO05D007496 2.6e-98 362.8 331 61.3
Glyma.13G265200 Glycine max HOM05D005699 ORTHO05D007496 2.6e-98 362.8 301 64.8
FAN16G3421 Fragaria x ananassa HOM05D005699 ORTHO05D007496 3.4e-98 362.5 265 70.2
CAN.G375.48 Capsicum annuum HOM05D005699 ORTHO05D007496 4.4e-98 362.1 284 66.2
FAN21G2533 Fragaria x ananassa HOM05D005699 ORTHO05D007496 4.4e-98 362.1 265 69.8
CSS0029451 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 7.6e-98 361.3 273 68.1
CsaV3_4G008250 Cucumis sativus L. HOM05D005699 ORTHO05D007496 9.9e-98 360.9 288 66.7
VMungo1080G0954 Vigna mungo HOM05D005699 ORTHO05D007496 9.9e-98 360.9 314 62.7
MBI06_g08519_MAGBIO Magnolia biondii HOM05D005699 ORTHO05D007496 1.3e-97 360.5 315 61.0
FAN25G0494 Fragaria x ananassa HOM05D005699 ORTHO05D007496 1.7e-97 360.1 265 69.1
Lalb_Chr20g0109131 Lupinus albus HOM05D005699 ORTHO05D007496 2.2e-97 359.8 305 62.6
Prupe.4G156800 Prunus persica HOM05D005699 ORTHO05D007496 2.2e-97 359.8 309 62.5
Glyma.12G233800 Glycine max HOM05D005699 ORTHO05D007496 2.9e-97 359.4 253 72.7
Lj3g0018973 Lotus japonicus HOM05D005699 ORTHO05D007496 3.8e-97 359.0 303 63.4
Potri.011G105700 Populus trichocarpa HOM05D005699 ORTHO05D007496 3.8e-97 359.0 303 63.7
Rhsim06G0211500 Rhododendron simsii HOM05D005699 ORTHO05D007496 4.9e-97 358.6 303 64.0
RcHm_v2.0_Chr5g0029561 Rosa chinensis HOM05D005699 ORTHO05D007496 4.9e-97 358.6 265 70.2
Solyc07g062180.4 Solanum lycopersicum HOM05D005699 ORTHO05D007496 4.9e-97 358.6 271 68.6
MD03G1247900 Malus domestica HOM05D005699 ORTHO05D007496 6.4e-97 358.2 261 69.7
COL.COLO4_17478 Corchorus olitorius HOM05D005699 ORTHO05D007496 8.4e-97 357.8 306 61.1
Manes.15G097700 Manihot esculenta HOM05D005699 ORTHO05D007496 8.4e-97 357.8 255 71.8
Sed0019309 Sechium edule HOM05D005699 ORTHO05D007496 8.4e-97 357.8 288 66.0
CiPaw.12G110500 Carya illinoinensis HOM05D005699 ORTHO05D007496 1.1e-96 357.5 317 59.3
Aqoxy1G01911 Aquilegia oxysepala HOM05D005699 ORTHO05D007496 1.4e-96 357.1 251 70.9
Phvul.005G076800 Phaseolus vulgaris HOM05D005699 ORTHO05D007496 1.4e-96 357.1 253 71.5
Sabra11G0080500 Salix brachista HOM05D005699 ORTHO05D007496 1.4e-96 357.1 303 63.4
PSO541G1284 Papaver somniferum HOM05D005699 ORTHO05D007496 2.4e-96 356.3 304 63.8
SalBow7G3647 Salvia bowleyana HOM05D005699 ORTHO05D007496 2.4e-96 356.3 255 70.6
AT1G78620 Arabidopsis thaliana HOM05D005699 ORTHO05D007496 4.2e-96 355.5 306 62.4
Gohir.D11G303400 Gossypium hirsutum HOM05D005699 ORTHO05D007496 4.2e-96 355.5 283 63.6
Gorai.007G331300 Gossypium raimondii HOM05D005699 ORTHO05D007496 4.2e-96 355.5 283 63.6
MD11G1269700 Malus domestica HOM05D005699 ORTHO05D007496 4.2e-96 355.5 261 68.6
Haze_09244 Corylus avellana HOM05D005699 ORTHO05D007496 7.1e-96 354.8 282 66.3
AL2G39020 Arabidopsis lyrata HOM05D005699 ORTHO05D007496 9.3e-96 354.4 306 62.1
BcaC08g47425 Brassica carinata HOM05D005699 ORTHO05D007496 9.3e-96 354.4 322 59.6
A07p43890 Brassica napus HOM05D005699 ORTHO05D007496 9.3e-96 354.4 310 61.0
THA.LOC104813995 Tarenaya hassleriana HOM05D005699 ORTHO05D007496 9.3e-96 354.4 276 65.9
BraA07t31896Z Brassica rapa HOM05D005699 ORTHO05D007496 1.2e-95 354.0 322 59.3
TWI39G0441 Tripterygium wilfordii HOM05D005699 ORTHO05D007496 1.2e-95 354.0 306 61.4
Gohir.A11G289100 Gossypium hirsutum HOM05D005699 ORTHO05D007496 1.6e-95 353.6 252 69.8
Thecc.07G132200 Theobroma cacao HOM05D005699 ORTHO05D007496 1.6e-95 353.6 252 71.0
Carub.0002s2547 Capsella rubella HOM05D005699 ORTHO05D007496 2.1e-95 353.2 255 69.0
AUR62039586 Chenopodium quinoa HOM05D005699 ORTHO05D007496 2.1e-95 353.2 280 66.1
Sp5g33710 Schrenkiella parvula HOM05D005699 ORTHO05D007496 2.7e-95 352.8 267 66.7
arahy.Tifrunner.gnm1.ann1.EKI9R8 Arachis hypogaea HOM05D005699 ORTHO05D007496 4.6e-95 352.1 282 66.0
C06p52520 Brassica napus HOM05D005699 ORTHO05D007496 4.6e-95 352.1 322 59.0
CARHR072140 Cardamine hirsuta HOM05D005699 ORTHO05D007496 4.6e-95 352.1 269 66.5
Eucgr.F01366 Eucalyptus grandis HOM05D005699 ORTHO05D007496 4.6e-95 352.1 252 71.0
Ca_03931_v3 Cicer arietinum L. HOM05D005699 ORTHO05D007496 6.0e-95 351.7 271 67.2
DCAR_019613 Daucus carota HOM05D005699 ORTHO05D007496 6.0e-95 351.7 255 71.8
Aa31LG4G2340 Aethionema arabicum HOM05D005699 ORTHO05D007496 1.7e-94 350.1 261 68.6
CSS0007542 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 1.7e-94 350.1 273 65.6
Thhalv10018838m.g Eutrema salsugineum HOM05D005699 ORTHO05D007496 1.7e-94 350.1 267 66.3
MSTRG.14252 Avicennia marina HOM05D005699 ORTHO05D007496 3.9e-94 349.0 282 64.9
BcaC08g47427 Brassica carinata HOM05D005699 ORTHO05D007496 3.9e-94 349.0 267 65.9
Lj1A824T64 Lonicera japonica HOM05D005699 ORTHO05D007496 5.1e-94 348.6 255 70.2
Medtr2g073380 Medicago truncatula HOM05D005699 ORTHO05D007496 8.7e-94 347.8 303 61.1
BolC6t40271H Brassica oleracea HOM05D005699 ORTHO05D007496 3.3e-93 345.9 332 57.5
SalBow4G2873 Salvia bowleyana HOM05D005699 ORTHO05D007496 1.6e-92 343.6 295 63.7
Nitab4.5_0003230g0020 Nicotiana tabacum HOM05D005699 ORTHO05D007496 3.6e-92 342.4 346 56.9
CSS0028539 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 7.6e-90 334.7 292 61.3
Os01g0729100 Oryza sativa ssp. japonica HOM05D005699 ORTHO05D007496 1.3e-89 334.0 282 63.5
ClCG07G010100 Citrullus lanatus HOM05D005699 ORTHO05D007496 2.9e-89 332.8 339 56.0
Lsat_1_v5_gn_9_100441 Lactuca sativa HOM05D005699 ORTHO05D007496 2.9e-89 332.8 276 64.1
Psat5g233280 Pisum sativum HOM05D005699 ORTHO05D007496 1.1e-88 330.9 261 64.8
PGSC0003DMG400007091 Solanum tuberosum HOM05D005699 ORTHO05D007496 2.4e-88 329.7 364 53.8
QL08p037175 Quercus lobata HOM05D005699 ORTHO05D007496 3.0e-86 322.8 237 70.9
QL08p037250 Quercus lobata HOM05D005699 ORTHO05D007496 3.0e-86 322.8 237 70.9
Sabra11G0074900 Salix brachista HOM05D005699 ORTHO05D007496 3.0e-86 322.8 282 62.1
unitig_746.g26834 Utricularia gibba HOM05D005699 ORTHO05D007496 3.0e-86 322.8 254 63.4
ATR0213G027 Amborella trichopoda HOM05D005699 ORTHO05D007496 1.1e-85 320.9 221 72.9
AagrBONN_evm.TU.Sc2ySwM_228.4605 Anthoceros agrestis HOM05D005699 ORTHO05D007496 2.7e-79 299.7 240 60.0
Manes.03G092700 Manihot esculenta HOM05D005699 ORTHO05D007496 1.6e-76 290.4 192 78.1
CBR_g26242 Chara braunii HOM05D005699 ORTHO05D007496 2.8e-76 289.7 248 58.5
Hma1.2p1_0050F.1_g028840 Hydrangea macrophylla HOM05D005699 ORTHO05D007496 6.2e-76 288.5 212 71.2
TPR.G13095 Trifolium pratense HOM05D005699 ORTHO05D007496 6.2e-76 288.5 450 42.2
Pp3c13_15320 Physcomitrium patens HOM05D005699 ORTHO05D007496 1.1e-75 287.7 279 54.5
FvH4_3g17770 Fragaria vesca HOM05D005699 ORTHO05D007496 1.4e-75 287.3 205 72.2
Sc16g0007730 Simmondsia chinensis HOM05D005699 ORTHO05D007496 2.4e-75 286.6 225 66.7
MELO3C016111.2 Cucumis melo HOM05D005699 ORTHO05D007496 7.6e-74 281.6 224 68.3
CiPaw.11G155600 Carya illinoinensis HOM05D005699 ORTHO05D007496 8.4e-73 278.1 200 73.5
SMO331G0093 Selaginella moellendorffii HOM05D005699 ORTHO05D007496 1.3e-70 270.8 254 55.1
Mapoly0056s0015 Marchantia polymorpha HOM05D005699 ORTHO05D007496 1.6e-68 263.8 247 51.8
Sopen07g030460 Solanum pennellii HOM05D005699 ORTHO05D007496 3.4e-66 256.1 179 73.2
CDE02G0824 Ceratophyllum demersum HOM05D005699 ORTHO05D007496 7.6e-66 255.0 225 61.3
Pp3c13_3550 Physcomitrium patens HOM05D005699 ORTHO05D007496 1.0e-65 254.6 248 54.8
SHI27569 Sapria himalayana HOM05D005699 ORTHO05D007496 2.2e-65 253.4 285 52.3
Actinidia37024 Actinidia chinensis HOM05D005699 ORTHO05D007496 5.3e-59 232.3 210 62.4
Cre06.g294800 Chlamydomonas reinhardtii HOM05D005699 ORTHO05D007496 1.0e-57 228.0 238 52.1
vmacro11968 Vaccinium macrocarpon HOM05D005699 ORTHO05D007496 1.1e-56 224.6 201 63.2
MCO15G637 Micromonas commoda HOM05D005699 ORTHO05D007496 1.7e-52 210.7 236 48.3
Zm00001eb361870 Zea mays HOM05D005699 ORTHO05D007496 4.8e-52 209.1 180 61.7
SEGI_05295 Sequoiadendron giganteum HOM05D005699 ORTHO05D007496 2.0e-50 203.8 209 53.6
PRCOL_00000954 Prasinoderma coloniale HOM05D005699 ORTHO05D007496 7.9e-47 191.8 271 43.9
HPP92_006376 Vanilla planifolia HOM05D005699 ORTHO05D007496 7.4e-45 185.3 157 64.3
CDE06G0498 Ceratophyllum demersum HOM05D005699 ORTHO05D007496 9.4e-40 168.3 255 40.8
Medtr7g055620 Medicago truncatula HOM05D005699 ORTHO05D007496 6.5e-25 119.0 90 72.2
Thecc.07G131400 Theobroma cacao HOM05D005699 ORTHO05D007496 1.6e-15 87.8 119 47.1
Thecc.07G131900 Theobroma cacao HOM05D005699 ORTHO05D007496 1.8e-14 84.3 81 53.1
Thecc.07G131100 Theobroma cacao HOM05D005699 ORTHO05D007496 5.7e-13 79.3 67 56.7
MELO3C029615.2 Cucumis melo HOM05D005699 ORTHO05D170539 7.0e-11 72.4 56 66.1
MELO3C032042.2 Cucumis melo HOM05D005699 ORTHO05D000044 9.2e-11 72.0 52 71.2
SEGI_06384 Sequoiadendron giganteum HOM05D005699 ORTHO05D007496 5.9e-10 69.3 50 64.0
FvH4_7g00710 Fragaria vesca HOM05D005699 ORTHO05D046157 1.5e-08 64.7 59 54.2
FAN10G4235 Fragaria x ananassa HOM05D030717 ORTHO05D046157 1.6e-07 61.2 48 58.3
FAN06G4357 Fragaria x ananassa HOM05D023873 ORTHO05D007496 2.8e-07 60.5 51 58.8
BcaB02g07173 Brassica carinata HOM05D005699 ORTHO05D091938 3.6e-07 60.1 87 46.0


User provided reference genes

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