Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12511 Utricularia gibba HOM05D000863 ORTHO05D000682 1.3e-84 316.2 152 100.0
unitig_46.g18776 Utricularia gibba HOM05D000863 ORTHO05D000682 5.9e-16 88.2 54 79.6
MD01G1192100 Malus domestica HOM05D000863 ORTHO05D000682 1.2e-08 63.9 49 63.3
GSVIVG01018453001 Vitis vinifera HOM05D000863 ORTHO05D000682 2.7e-08 62.8 49 59.2
Rhsim03G0174300 Rhododendron simsii HOM05D000863 ORTHO05D000682 3.5e-08 62.4 49 59.2
RcHm_v2.0_Chr1g0351591 Rosa chinensis HOM05D000863 ORTHO05D000682 5.9e-08 61.6 50 56.0
FAN10G0883 Fragaria x ananassa HOM05D000863 ORTHO05D000682 7.8e-08 61.2 50 58.0
Manes.05G042300 Manihot esculenta HOM05D000863 ORTHO05D000682 7.8e-08 61.2 51 58.8
FvH4_7g12610 Fragaria vesca HOM05D000863 ORTHO05D000682 1.3e-07 60.5 47 55.3
FAN01G2383 Fragaria x ananassa HOM05D000863 ORTHO05D000682 1.3e-07 60.5 47 55.3
FAN03G1028 Fragaria x ananassa HOM05D000863 ORTHO05D000682 1.3e-07 60.5 47 55.3
FAN06G0821 Fragaria x ananassa HOM05D000863 ORTHO05D000682 1.3e-07 60.5 47 55.3
FAN06G3639 Fragaria x ananassa HOM05D000863 ORTHO05D000682 1.3e-07 60.5 47 55.3
Prupe.2G286800 Prunus persica HOM05D000863 ORTHO05D000682 1.3e-07 60.5 49 59.2
unitig_748.g7093 Utricularia gibba HOM05D000863 ORTHO05D000682 1.3e-07 60.5 46 56.5
vmacro06734 Vaccinium macrocarpon HOM05D000863 ORTHO05D000682 1.3e-07 60.5 49 59.2
MSTRG.27151 Avicennia marina HOM05D000863 ORTHO05D000682 1.7e-07 60.1 48 52.1
MD02G1198000 Malus domestica HOM05D000863 ORTHO05D000682 2.3e-07 59.7 49 53.1
Nitab4.5_0000205g0190 Nicotiana tabacum HOM05D000863 ORTHO05D000682 2.3e-07 59.7 47 55.3
Actinidia25055 Actinidia chinensis HOM05D000863 ORTHO05D000682 3.0e-07 59.3 49 53.1
Oeu030144.1 Olea europaea HOM05D000863 ORTHO05D000682 3.0e-07 59.3 46 56.5
PGR142G0354 Punica granatum HOM05D000863 ORTHO05D000682 3.0e-07 59.3 50 52.0
MSTRG.27488 Avicennia marina HOM05D000863 ORTHO05D000682 3.9e-07 58.9 47 53.2
ECA234G1937 Erigeron canadensis HOM05D000863 ORTHO05D000682 3.9e-07 58.9 49 55.1
Medtr1g102070 Medicago truncatula HOM05D000863 ORTHO05D000682 3.9e-07 58.9 47 55.3
CiPaw.03G099700 Carya illinoinensis HOM05D000863 ORTHO05D000682 5.0e-07 58.5 49 57.1
FAN03G1409 Fragaria x ananassa HOM05D000863 ORTHO05D000682 5.0e-07 58.5 49 57.1
FAN03G3054 Fragaria x ananassa HOM05D000863 ORTHO05D000682 5.0e-07 58.5 49 57.1
Actinidia13539 Actinidia chinensis HOM05D000863 ORTHO05D000682 6.6e-07 58.2 49 55.1
Cc02_g03620 Coffea canephora HOM05D000863 ORTHO05D000682 6.6e-07 58.2 50 52.0
Duzib205G0812 Durio zibethinus HOM05D000863 ORTHO05D000682 6.6e-07 58.2 49 55.1
arahy.Tifrunner.gnm1.ann1.F7AUT2 Arachis hypogaea HOM05D000863 ORTHO05D000682 8.6e-07 57.8 47 57.4
FAN10G3453 Fragaria x ananassa HOM05D000863 ORTHO05D000682 8.6e-07 57.8 47 53.2
MD00G1003600 Malus domestica HOM05D000863 ORTHO05D000682 8.6e-07 57.8 49 59.2
Manes.01G264100 Manihot esculenta HOM05D000863 ORTHO05D000682 8.6e-07 57.8 54 53.7
CANSAT21G1224 Cannabis sativa HOM05D000863 ORTHO05D000682 1.1e-06 57.4 46 54.3
Cfa001824 Carpinus fangiana HOM05D000863 ORTHO05D000682 1.1e-06 57.4 46 58.7
Ciclev10005157m.g Citrus clementina HOM05D000863 ORTHO05D000682 1.1e-06 57.4 47 57.4
Manes.06G141200 Manihot esculenta HOM05D000863 ORTHO05D000682 1.1e-06 57.4 47 53.2
PSO478G1950 Papaver somniferum HOM05D000863 ORTHO05D000682 1.1e-06 57.4 47 53.2
PSO782G0113 Papaver somniferum HOM05D000863 ORTHO05D000682 1.1e-06 57.4 47 53.2
Phvul.004G123600 Phaseolus vulgaris HOM05D000863 ORTHO05D000682 1.1e-06 57.4 49 55.1
Prupe.2G150700 Prunus persica HOM05D000863 ORTHO05D000682 1.1e-06 57.4 47 55.3
Cfa001820 Carpinus fangiana HOM05D000863 ORTHO05D000682 1.5e-06 57.0 46 58.7
RcHm_v2.0_Chr1g0351631 Rosa chinensis HOM05D000863 ORTHO05D000682 1.5e-06 57.0 49 53.1
PGSC0003DMG400039968 Solanum tuberosum HOM05D000863 ORTHO05D000682 1.5e-06 57.0 47 51.1
MSTRG.8781 Avicennia marina HOM05D000863 ORTHO05D000682 1.9e-06 56.6 45 51.1
CSS0019461 Camellia sinensis var. sinensis HOM05D000863 ORTHO05D000682 1.9e-06 56.6 47 53.2
Glyma.09G149200 Glycine max HOM05D000863 ORTHO05D000682 1.9e-06 56.6 49 53.1
MD00G1123700 Malus domestica HOM05D000863 ORTHO05D000682 1.9e-06 56.6 47 53.2
RcHm_v2.0_Chr1g0353791 Rosa chinensis HOM05D000863 ORTHO05D000682 1.9e-06 56.6 49 49.0
RcHm_v2.0_Chr1g0376161 Rosa chinensis HOM05D000863 ORTHO05D000682 1.9e-06 56.6 49 55.1
Sabra14G0052700 Salix brachista HOM05D000863 ORTHO05D000682 1.9e-06 56.6 49 57.1
PGSC0003DMG400016537 Solanum tuberosum HOM05D000863 ORTHO05D000682 1.9e-06 56.6 47 51.1
Manes.14G031200 Manihot esculenta HOM05D000863 ORTHO05D000682 2.5e-06 56.2 49 55.1
Sc13g0008200 Simmondsia chinensis HOM05D000863 ORTHO05D000682 2.5e-06 56.2 46 52.2
Glyma.16G200800 Glycine max HOM05D000863 ORTHO05D000682 3.3e-06 55.8 49 51.0
Gohir.A09G052000 Gossypium hirsutum HOM05D000863 ORTHO05D000682 3.3e-06 55.8 49 53.1
Gorai.006G051400 Gossypium raimondii HOM05D000863 ORTHO05D000682 3.3e-06 55.8 49 53.1
Oeu039239.1 Olea europaea HOM05D000863 ORTHO05D000682 3.3e-06 55.8 44 59.1
TPR.G17405 Trifolium pratense HOM05D000863 ORTHO05D000682 3.3e-06 55.8 47 51.1
unitig_0.g2775 Utricularia gibba HOM05D000863 ORTHO05D000682 3.3e-06 55.8 46 56.5
unitig_0.g467 Utricularia gibba HOM05D000863 ORTHO05D000682 3.3e-06 55.8 48 54.2
Cfa008254 Carpinus fangiana HOM05D000863 ORTHO05D000682 4.3e-06 55.5 46 56.5
Haze_16717 Corylus avellana HOM05D000863 ORTHO05D000682 4.3e-06 55.5 46 58.7
FAN01G2896 Fragaria x ananassa HOM05D000863 ORTHO05D000682 4.3e-06 55.5 49 55.1
Gohir.D07G044400 Gossypium hirsutum HOM05D000863 ORTHO05D000682 4.3e-06 55.5 49 55.1
Lj5g0008604 Lotus japonicus HOM05D000863 ORTHO05D000682 4.3e-06 55.5 49 55.1
Potri.014G073700 Populus trichocarpa HOM05D000863 ORTHO05D000682 4.3e-06 55.5 47 57.4
VMungo0464G1102 Vigna mungo HOM05D000863 ORTHO05D000682 4.3e-06 55.5 49 53.1
VMungo0720G0748 Vigna mungo HOM05D000863 ORTHO05D000682 4.3e-06 55.5 49 55.1
GSVIVG01027572001 Vitis vinifera HOM05D000863 ORTHO05D000682 4.3e-06 55.5 44 61.4
Atru.chr5.362 Acer truncatum HOM05D000863 ORTHO05D000682 5.6e-06 55.1 49 57.1
BcaC09g50778 Brassica carinata HOM05D000863 ORTHO05D000682 5.6e-06 55.1 45 57.8
C01p20950 Brassica napus HOM05D000863 ORTHO05D000682 5.6e-06 55.1 45 57.8
BolC1t02022H Brassica oleracea HOM05D000863 ORTHO05D000682 5.6e-06 55.1 45 57.8
Dinv28510 Davidia involucrata HOM05D000863 ORTHO05D000682 5.6e-06 55.1 49 55.1
FvH4_7g28670 Fragaria vesca HOM05D000863 ORTHO05D000682 5.6e-06 55.1 49 55.1
FAN06G1645 Fragaria x ananassa HOM05D000863 ORTHO05D000682 5.6e-06 55.1 49 55.1
FAN06G4768 Fragaria x ananassa HOM05D000863 ORTHO05D000682 5.6e-06 55.1 49 55.1
Glyma.20G153400 Glycine max HOM05D000863 ORTHO05D000682 5.6e-06 55.1 49 55.1
Gohir.A07G040300 Gossypium hirsutum HOM05D000863 ORTHO05D000682 5.6e-06 55.1 49 53.1
Gohir.A09G179200 Gossypium hirsutum HOM05D000863 ORTHO05D000682 5.6e-06 55.1 49 53.1
Gohir.D09G174550 Gossypium hirsutum HOM05D000863 ORTHO05D000682 5.6e-06 55.1 49 53.1
Gorai.006G196600 Gossypium raimondii HOM05D000863 ORTHO05D000682 5.6e-06 55.1 49 53.1
TWI23G0039 Tripterygium wilfordii HOM05D000863 ORTHO05D000682 5.6e-06 55.1 49 55.1
Manes.11G065700 Manihot esculenta HOM05D000863 ORTHO05D000682 7.3e-06 54.7 49 53.1
Sopen09g003820 Solanum pennellii HOM05D000863 ORTHO05D000682 7.3e-06 54.7 47 48.9
Aqoxy7G00508 Aquilegia oxysepala HOM05D000863 ORTHO05D000682 9.5e-06 54.3 49 53.1
BraA03t14671Z Brassica rapa HOM05D000863 ORTHO05D000682 9.5e-06 54.3 46 52.2
ClCG01G005290 Citrullus lanatus HOM05D000863 ORTHO05D000682 9.5e-06 54.3 46 52.2
Ciclev10020694m.g Citrus clementina HOM05D000863 ORTHO05D000682 9.5e-06 54.3 46 58.7
DCAR_009411 Daucus carota HOM05D000863 ORTHO05D000682 9.5e-06 54.3 50 44.0
FAN10G1539 Fragaria x ananassa HOM05D000863 ORTHO05D000682 9.5e-06 54.3 47 51.1
Phvul.007G064800 Phaseolus vulgaris HOM05D000863 ORTHO05D000682 9.5e-06 54.3 49 51.0
RcHm_v2.0_Chr1g0351621 Rosa chinensis HOM05D000863 ORTHO05D000682 9.5e-06 54.3 49 53.1
SGA_v2.0_scaffold2G01096 Striga asiatica HOM05D000863 ORTHO05D000682 9.5e-06 54.3 49 51.0


User provided reference genes

Program Settings