Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12474 Utricularia gibba HOM05D003400 ORTHO05D003687 1.8e-176 622.5 318 100.0
MSTRG.8889 Avicennia marina HOM05D003400 ORTHO05D003687 6.7e-54 215.3 320 44.1
MSTRG.171 Avicennia marina HOM05D003400 ORTHO05D003687 2.6e-53 213.4 313 45.0
SGA_v2.0_scaffold60G20888 Striga asiatica HOM05D003400 ORTHO05D003687 3.1e-51 206.5 277 47.3
Oeu063984.1 Olea europaea HOM05D003400 ORTHO05D003687 3.5e-50 203.0 311 42.1
SGA_v2.0_scaffold44G16620 Striga asiatica HOM05D003400 ORTHO05D003687 3.5e-50 203.0 292 44.5
SalBow3G2848 Salvia bowleyana HOM05D003400 ORTHO05D003687 7.2e-48 195.3 330 41.5
Migut.F01244 Erythranthe guttata HOM05D003400 ORTHO05D003687 1.6e-47 194.1 270 45.6
Migut.F00607 Erythranthe guttata HOM05D003400 ORTHO05D003687 1.8e-46 190.7 293 43.3
Actinidia31626 Actinidia chinensis HOM05D003400 ORTHO05D003687 3.3e-45 186.4 312 41.3
Actinidia07793 Actinidia chinensis HOM05D003400 ORTHO05D003687 4.4e-45 186.0 307 42.0
Actinidia13648 Actinidia chinensis HOM05D003400 ORTHO05D003687 2.2e-44 183.7 321 39.6
Lj1C967G2 Lonicera japonica HOM05D003400 ORTHO05D003687 3.7e-44 183.0 281 41.3
CSS0037757 Camellia sinensis var. sinensis HOM05D003400 ORTHO05D003687 1.8e-43 180.6 316 40.8
GSVIVG01032673001 Vitis vinifera HOM05D003400 ORTHO05D003687 1.8e-43 180.6 296 40.2
Cc02_g05370 Coffea canephora HOM05D003400 ORTHO05D003687 9.1e-43 178.3 324 39.8
Hma1.2p1_0264F.1_g106160 Hydrangea macrophylla HOM05D003400 ORTHO05D003687 2.0e-42 177.2 315 40.0
Peaxi162Scf00739g00321 Petunia axillaris HOM05D003400 ORTHO05D003687 2.0e-42 177.2 314 38.9
Rhsim09G0185900 Rhododendron simsii HOM05D003400 ORTHO05D003687 2.7e-42 176.8 279 42.7
vmacro09957 Vaccinium macrocarpon HOM05D003400 ORTHO05D003687 3.5e-42 176.4 299 40.1
Hma1.2p1_0292F.1_g115970 Hydrangea macrophylla HOM05D003400 ORTHO05D003687 4.5e-42 176.0 281 41.6
Sopen06g015320 Solanum pennellii HOM05D003400 ORTHO05D003687 1.7e-41 174.1 321 39.9
PGSC0003DMG400016640 Solanum tuberosum HOM05D003400 ORTHO05D003687 1.7e-41 174.1 321 39.3
CAN.G24.15 Capsicum annuum HOM05D003400 ORTHO05D003687 2.9e-41 173.3 326 38.7
Dinv21846 Davidia involucrata HOM05D003400 ORTHO05D003687 3.8e-41 172.9 351 36.8
TAR369G0853 Trochodendron aralioides HOM05D003400 ORTHO05D003687 3.8e-41 172.9 319 37.3
Solyc06g048970.3 Solanum lycopersicum HOM05D003400 ORTHO05D003687 8.5e-41 171.8 324 39.5
Lsat_1_v5_gn_9_60041 Lactuca sativa HOM05D003400 ORTHO05D003687 1.1e-40 171.4 271 42.1
DCAR_018037 Daucus carota HOM05D003400 ORTHO05D003687 1.5e-40 171.0 278 41.0
Manes.07G141701 Manihot esculenta HOM05D003400 ORTHO05D003687 1.9e-40 170.6 289 40.8
unitig_46.g18748 Utricularia gibba HOM05D003400 ORTHO05D003687 3.2e-40 169.9 129 70.5
Gohir.A05G403000 Gossypium hirsutum HOM05D003400 ORTHO05D003687 9.4e-40 168.3 308 38.3
Nitab4.5_0002745g0010 Nicotiana tabacum HOM05D003400 ORTHO05D003687 9.4e-40 168.3 312 38.8
Gohir.D05G280400 Gossypium hirsutum HOM05D003400 ORTHO05D003687 2.1e-39 167.2 275 40.4
Manes.07G143400 Manihot esculenta HOM05D003400 ORTHO05D003687 2.7e-39 166.8 314 38.5
Duzib106G2049 Durio zibethinus HOM05D003400 ORTHO05D003687 6.1e-39 165.6 311 39.5
QL08p064852 Quercus lobata HOM05D003400 ORTHO05D003687 6.1e-39 165.6 302 39.7
Nitab4.5_0000171g0020 Nicotiana tabacum HOM05D003400 ORTHO05D003687 8.0e-39 165.2 312 38.1
Duzib114G0186 Durio zibethinus HOM05D003400 ORTHO05D003687 1.0e-38 164.9 308 40.6
Atru.chr12.183 Acer truncatum HOM05D003400 ORTHO05D003687 1.4e-38 164.5 293 39.6
Eucgr.J00113 Eucalyptus grandis HOM05D003400 ORTHO05D003687 1.4e-38 164.5 350 37.4
Lj8C54T21 Lonicera japonica HOM05D003400 ORTHO05D003687 1.8e-38 164.1 276 40.9
COL.COLO4_19367 Corchorus olitorius HOM05D003400 ORTHO05D003687 2.3e-38 163.7 309 38.5
DCAR_029743 Daucus carota HOM05D000792 ORTHO05D004195 3.0e-38 163.3 291 41.2
PGR044G0713 Punica granatum HOM05D003400 ORTHO05D003687 4.0e-38 162.9 298 39.6
Rhsim03G0152500 Rhododendron simsii HOM05D003400 ORTHO05D003687 4.0e-38 162.9 328 36.0
Ciclev10030981m.g Citrus clementina HOM05D003400 ORTHO05D003687 5.2e-38 162.5 304 39.5
Thecc.10G181000 Theobroma cacao HOM05D003400 ORTHO05D003687 6.8e-38 162.2 302 39.7
Gohir.D04G012500 Gossypium hirsutum HOM05D003400 ORTHO05D003687 1.2e-37 161.4 309 37.5
TAR623G0519 Trochodendron aralioides HOM05D003400 ORTHO05D003687 1.2e-37 161.4 319 36.7
CANSAT21G1871 Cannabis sativa HOM05D003400 ORTHO05D003687 4.4e-37 159.5 303 35.6
Manes.10G001400 Manihot esculenta HOM05D003400 ORTHO05D003687 4.4e-37 159.5 304 39.5
TAR633G0453 Trochodendron aralioides HOM05D003400 ORTHO05D003687 4.4e-37 159.5 332 35.2
ECA232G0413 Erigeron canadensis HOM05D003400 ORTHO05D003687 5.7e-37 159.1 268 39.9
Gorai.012G014800 Gossypium raimondii HOM05D003400 ORTHO05D003687 9.8e-37 158.3 309 37.5
Nn2g10302 Nelumbo nucifera HOM05D003400 ORTHO05D003687 9.8e-37 158.3 324 38.3
Gorai.009G293800 Gossypium raimondii HOM05D003400 ORTHO05D003687 1.3e-36 157.9 290 37.2
MBI03_g15591_MAGBIO Magnolia biondii HOM05D003400 ORTHO05D003687 2.8e-36 156.8 306 36.6
TWI53G0017 Tripterygium wilfordii HOM05D003400 ORTHO05D003687 3.7e-36 156.4 308 37.7
CsaV3_5G010950 Cucumis sativus L. HOM05D003400 ORTHO05D003687 6.3e-36 155.6 322 37.6
HanXRQChr08g0221571 Helianthus annuus HOM05D003400 ORTHO05D003687 6.3e-36 155.6 275 38.9
TWI09G1099 Tripterygium wilfordii HOM05D003400 ORTHO05D003687 6.3e-36 155.6 301 39.2
Gohir.A05G278600 Gossypium hirsutum HOM05D003400 ORTHO05D003687 8.3e-36 155.2 290 36.9
ClCG07G005110 Citrullus lanatus HOM05D003400 ORTHO05D003687 1.4e-35 154.5 324 37.3
Rhsim03G0152100 Rhododendron simsii HOM05D003400 ORTHO05D003687 1.4e-35 154.5 313 35.8
Sabra19G0073600 Salix brachista HOM05D003400 ORTHO05D003687 1.4e-35 154.5 301 37.9
MELO3C020148.2 Cucumis melo HOM05D003400 ORTHO05D003687 1.8e-35 154.1 322 37.3
Hund13449 Selenicereus undatus HOM05D003400 ORTHO05D003687 2.4e-35 153.7 312 38.5
THA.LOC104816509 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 3.1e-35 153.3 287 38.3
AUR62030610 Chenopodium quinoa HOM05D003400 ORTHO05D003687 1.2e-34 151.4 322 36.3
THA.LOC104823169 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 2.0e-34 150.6 283 37.1
Aqoxy4G02422 Aquilegia oxysepala HOM05D003400 ORTHO05D003687 3.5e-34 149.8 293 37.5
CANSAT21G0473 Cannabis sativa HOM05D003400 ORTHO05D003687 4.5e-34 149.4 305 34.4
AUR62024934 Chenopodium quinoa HOM05D003400 ORTHO05D003687 5.9e-34 149.1 323 36.8
VMungo0647G2516 Vigna mungo HOM05D003400 ORTHO05D003687 5.9e-34 149.1 312 36.5
MD07G1233700 Malus domestica HOM05D003400 ORTHO05D003687 1.0e-33 148.3 287 36.9
Potri.019G058200 Populus trichocarpa HOM05D003400 ORTHO05D003687 1.3e-33 147.9 301 36.5
Glyma.14G117500 Glycine max HOM05D003400 ORTHO05D003687 1.7e-33 147.5 322 35.1
Glyma.17G191500 Glycine max HOM05D003400 ORTHO05D003687 1.7e-33 147.5 323 34.1
Sed0002948 Sechium edule HOM05D003400 ORTHO05D003687 1.7e-33 147.5 317 35.0
Hund15817 Selenicereus undatus HOM05D003400 ORTHO05D003687 1.7e-33 147.5 319 36.7
BolC2t06192H Brassica oleracea HOM05D003400 ORTHO05D003687 2.9e-33 146.7 274 39.4
Thhalv10013224m.g Eutrema salsugineum HOM05D003400 ORTHO05D003687 2.9e-33 146.7 277 36.8
Os02g0132200 Oryza sativa ssp. japonica HOM05D003400 ORTHO05D003687 2.9e-33 146.7 284 38.4
Phvul.001G062900 Phaseolus vulgaris HOM05D003400 ORTHO05D003687 2.9e-33 146.7 311 36.0
Zm00001eb231310 Zea mays HOM05D003400 ORTHO05D003687 2.9e-33 146.7 285 38.2
Nn5g26847 Nelumbo nucifera HOM05D003400 ORTHO05D003687 3.8e-33 146.4 335 34.6
CiPaw.01G306600 Carya illinoinensis HOM05D003400 ORTHO05D003687 5.0e-33 146.0 312 34.9
ECA233G0468 Erigeron canadensis HOM05D003400 ORTHO05D003687 6.6e-33 145.6 267 36.3
EL10Ac2g02645 Beta vulgaris HOM05D003400 ORTHO05D003687 8.6e-33 145.2 320 35.0
PSO170G4360 Papaver somniferum HOM05D003400 ORTHO05D003687 8.6e-33 145.2 293 36.2
PSO384G0897 Papaver somniferum HOM05D003400 ORTHO05D003687 8.6e-33 145.2 295 37.6
Sed0014609 Sechium edule HOM05D003400 ORTHO05D003687 1.1e-32 144.8 323 37.2
BcaC03g13153 Brassica carinata HOM05D003400 ORTHO05D003687 3.3e-32 143.3 274 37.6
PSO339G6613 Papaver somniferum HOM05D003400 ORTHO05D003687 3.3e-32 143.3 295 36.9
CARHR207990 Cardamine hirsuta HOM05D003400 ORTHO05D003687 4.2e-32 142.9 275 36.0
FAN03G2499 Fragaria x ananassa HOM05D003400 ORTHO05D003687 9.5e-32 141.7 299 34.8
Aa31LG11G6090 Aethionema arabicum HOM05D003400 ORTHO05D003687 1.6e-31 141.0 275 37.1
MBI15_g01598_MAGBIO Magnolia biondii HOM05D003400 ORTHO05D003687 2.1e-31 140.6 291 34.7
C02p02230 Brassica napus HOM05D003400 ORTHO05D003687 2.8e-31 140.2 274 37.2
FAN10G0615 Fragaria x ananassa HOM05D003400 ORTHO05D003687 2.8e-31 140.2 306 34.6
Cpa.g.sc19.58 Carica papaya HOM05D003400 ORTHO05D003687 3.6e-31 139.8 294 36.7
Prupe.2G264100 Prunus persica HOM05D003400 ORTHO05D003687 3.6e-31 139.8 311 35.7
FAN01G0709 Fragaria x ananassa HOM05D003400 ORTHO05D003687 4.7e-31 139.4 299 34.8
Sp6g37590 Schrenkiella parvula HOM05D003400 ORTHO05D003687 4.7e-31 139.4 283 37.1
FvH4_7g25930 Fragaria vesca HOM05D003400 ORTHO05D003687 6.1e-31 139.0 297 34.7
RcHm_v2.0_Chr1g0372301 Rosa chinensis HOM05D003400 ORTHO05D003687 8.0e-31 138.7 296 35.8
Actinidia01001 Actinidia chinensis HOM05D003400 ORTHO05D003687 1.0e-30 138.3 152 51.3
AT5G05240 Arabidopsis thaliana HOM05D003400 ORTHO05D003687 1.0e-30 138.3 283 36.4
Haze_17357 Corylus avellana HOM05D003400 ORTHO05D003687 1.0e-30 138.3 328 36.0
Lsat_1_v5_gn_8_11440 Lactuca sativa HOM05D003400 ORTHO05D003687 1.0e-30 138.3 259 36.7
Lalb_Chr24g0402681 Lupinus albus HOM05D003400 ORTHO05D003687 1.4e-30 137.9 313 34.5
BcaB05g21725 Brassica carinata HOM05D003400 ORTHO05D003687 1.8e-30 137.5 267 36.7
DCAR_020152 Daucus carota HOM05D003400 ORTHO05D003687 2.3e-30 137.1 264 34.1
FAN06G1869 Fragaria x ananassa HOM05D003400 ORTHO05D003687 2.3e-30 137.1 297 34.7
MD01G1167700 Malus domestica HOM05D003400 ORTHO05D003687 3.0e-30 136.7 332 33.7
Medtr1g007460 Medicago truncatula HOM05D003400 ORTHO05D003687 4.0e-30 136.3 299 36.1
A10p30950 Brassica napus HOM05D003400 ORTHO05D003687 6.8e-30 135.6 278 37.4
BraA10t45140Z Brassica rapa HOM05D003400 ORTHO05D003687 6.8e-30 135.6 278 37.4
Ca_03351_v3 Cicer arietinum L. HOM05D003400 ORTHO05D003687 6.8e-30 135.6 311 35.7
Carub.0006s0417 Capsella rubella HOM05D003400 ORTHO05D003687 8.9e-30 135.2 283 36.0
Lalb_Chr22g0360931 Lupinus albus HOM05D003400 ORTHO05D003687 1.2e-29 134.8 309 34.3
Psat6g036400 Pisum sativum HOM05D003400 ORTHO05D003687 1.2e-29 134.8 297 36.0
C09p71460 Brassica napus HOM05D003400 ORTHO05D003687 1.5e-29 134.4 281 37.7
BolC9t59909H Brassica oleracea HOM05D003400 ORTHO05D003687 1.5e-29 134.4 281 37.7
Dinv34484 Davidia involucrata HOM05D003400 ORTHO05D003687 2.0e-29 134.0 245 39.2
PSO017G2438 Papaver somniferum HOM05D003400 ORTHO05D003687 2.0e-29 134.0 321 34.3
vmacro06891 Vaccinium macrocarpon HOM05D003400 ORTHO05D003687 2.0e-29 134.0 330 33.3
arahy.Tifrunner.gnm1.ann1.45IBUQ Arachis hypogaea HOM05D003400 ORTHO05D003687 2.6e-29 133.7 276 34.4
arahy.Tifrunner.gnm1.ann1.JMN63H Arachis hypogaea HOM05D003400 ORTHO05D003687 5.7e-29 132.5 276 34.1
BcaC06g32233 Brassica carinata HOM05D003400 ORTHO05D003687 5.7e-29 132.5 281 37.0
CDE04G0272 Ceratophyllum demersum HOM05D003400 ORTHO05D003687 7.5e-29 132.1 298 34.6
Lj1g0015659 Lotus japonicus HOM05D003400 ORTHO05D003687 9.8e-29 131.7 311 34.4
BraA02t04839Z Brassica rapa HOM05D003400 ORTHO05D003687 2.2e-28 130.6 285 36.5
Potri.013G091100 Populus trichocarpa HOM05D003400 ORTHO05D003687 2.2e-28 130.6 276 38.8
AL6G15080 Arabidopsis lyrata HOM05D003400 ORTHO05D003687 2.8e-28 130.2 290 34.5
TPR.G24491 Trifolium pratense HOM05D003400 ORTHO05D003687 1.1e-27 128.3 307 34.9
EL10Ac3g07235 Beta vulgaris HOM05D003400 ORTHO05D003687 2.4e-27 127.1 351 31.6
C03p27090 Brassica napus HOM05D003400 ORTHO05D003687 1.0e-25 121.7 259 37.8
A03p22840 Brassica napus HOM05D003400 ORTHO05D003687 1.3e-25 121.3 259 37.5
Aa31LG3G1490 Aethionema arabicum HOM05D003400 ORTHO05D003687 2.3e-25 120.6 268 35.8
BcaC01g05391 Brassica carinata HOM05D003400 ORTHO05D003687 2.9e-25 120.2 259 37.5
ATR1127G045 Amborella trichopoda HOM05D003400 ORTHO05D003687 5.0e-25 119.4 303 35.0
THA.LOC104813796 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 1.9e-24 117.5 293 33.1
Ca_12768_v3 Cicer arietinum L. HOM05D003400 ORTHO05D003687 2.5e-24 117.1 267 33.3
Thhalv10016481m.g Eutrema salsugineum HOM05D003400 ORTHO05D003687 4.3e-24 116.3 275 34.9
AL4G38500 Arabidopsis lyrata HOM05D003400 ORTHO05D003687 1.4e-22 111.3 264 36.4
Carub.0004s2292 Capsella rubella HOM05D003400 ORTHO05D003687 1.8e-22 110.9 262 33.2
Sp4g22960 Schrenkiella parvula HOM05D003400 ORTHO05D003687 2.0e-21 107.5 265 34.7
HPP92_024977 Vanilla planifolia HOM05D003400 ORTHO05D003687 4.4e-21 106.3 262 33.6
AT2G40630 Arabidopsis thaliana HOM05D003400 ORTHO05D003687 5.8e-21 105.9 270 34.4
Zm00001eb209040 Zea mays HOM05D003400 ORTHO05D003687 6.4e-20 102.4 161 40.4
BcaB01g03526 Brassica carinata HOM05D003400 ORTHO05D003687 2.4e-19 100.5 251 33.5
HanXRQChr09g0252221 Helianthus annuus HOM05D003400 ORTHO05D003687 2.4e-19 100.5 148 45.3
CiPaw.13G063500 Carya illinoinensis HOM05D003400 ORTHO05D003687 3.2e-19 100.1 299 28.8
Haze_24472 Corylus avellana HOM05D003400 ORTHO05D003687 7.0e-19 99.0 311 31.8
Aqoxy2G00693 Aquilegia oxysepala HOM05D003400 ORTHO05D003687 2.7e-18 97.1 252 32.9
QL01p024561 Quercus lobata HOM05D003400 ORTHO05D003687 1.0e-17 95.1 330 29.4
BraA03t11508Z Brassica rapa HOM05D003400 ORTHO05D003687 3.0e-17 93.6 259 32.4
Sc14g0005640 Simmondsia chinensis HOM05D003400 ORTHO05D003687 3.3e-16 90.1 218 33.5
BraA04t18562Z Brassica rapa HOM05D003400 ORTHO05D003687 9.5e-16 88.6 251 30.7
A04p31060 Brassica napus HOM05D003400 ORTHO05D003687 3.6e-15 86.7 257 29.6
TAR636G2149 Trochodendron aralioides HOM05D003400 ORTHO05D003687 4.7e-15 86.3 120 41.7
Oeu006054.1 Olea europaea HOM05D003400 ORTHO05D003687 1.4e-14 84.7 203 33.5
BcaC02g07326 Brassica carinata HOM05D003400 ORTHO05D003687 1.8e-14 84.3 249 28.1
BcaB06g29158 Brassica carinata HOM05D003400 ORTHO05D003687 2.3e-14 84.0 239 28.9
BolC4t28345H Brassica oleracea HOM05D003400 ORTHO05D003687 1.2e-13 81.6 249 27.3
Potri.013G157700 Populus trichocarpa HOM05D003400 ORTHO05D003687 3.4e-13 80.1 255 31.8
unitig_46.g18749 Utricularia gibba HOM05D003400 ORTHO05D003687 4.4e-13 79.7 68 55.9
SEGI_16914 Sequoiadendron giganteum HOM05D003400 ORTHO05D003687 1.1e-11 75.1 340 26.2
MSTRG.8378 Avicennia marina HOM05D003400 ORTHO05D003687 9.2e-11 72.0 194 30.9
C04p68450 Brassica napus HOM05D003400 ORTHO05D003687 9.2e-11 72.0 106 41.5
TAR636G0727 Trochodendron aralioides HOM05D003400 ORTHO05D003687 3.5e-10 70.1 98 39.8
AagrBONN_evm.TU.Sc2ySwM_344.4066 Anthoceros agrestis HOM05D003400 ORTHO05D003687 3.3e-08 63.5 316 24.7
HanXRQChr09g0240401 Helianthus annuus HOM05D003400 ORTHO05D003687 3.3e-08 63.5 119 37.0
HanXRQChr09g0253941 Helianthus annuus HOM05D003400 ORTHO05D003687 3.3e-08 63.5 119 37.0
Pp3c27_4350 Physcomitrium patens HOM05D027247 ORTHO05D003687 4.3e-08 63.2 107 42.1
Sabra13G0126600 Salix brachista HOM05D003400 ORTHO05D003687 4.3e-08 63.2 257 29.6
BcaC06g32234 Brassica carinata HOM05D003400 ORTHO05D003687 7.3e-08 62.4 71 49.3
Actinidia33868 Actinidia chinensis HOM05D003400 ORTHO05D003687 4.7e-07 59.7 70 48.6
Duzib128G1678 Durio zibethinus HOM05D003400 ORTHO05D003687 1.8e-06 57.8 124 35.5


User provided reference genes

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