Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12468 Utricularia gibba HOM05D010646 ORTHO05D001770 1.9e-95 352.4 167 100.0
unitig_46.g18741 Utricularia gibba HOM05D002277 ORTHO05D001770 5.2e-13 78.6 51 68.6
Lsat_1_v5_gn_2_125460 Lactuca sativa HOM05D002277 ORTHO05D001770 1.0e-08 64.3 42 69.0
Hma1.2p1_1240F.1_g269550 Hydrangea macrophylla HOM05D002277 ORTHO05D001770 1.3e-08 63.9 50 66.0
SalBow3G1041 Salvia bowleyana HOM05D002277 ORTHO05D001770 1.3e-08 63.9 42 73.8
CSS0032322 Camellia sinensis var. sinensis HOM05D002277 ORTHO05D001770 2.2e-08 63.2 45 68.9
Cfa001229 Carpinus fangiana HOM05D002277 ORTHO05D001770 2.9e-08 62.8 71 50.7
C09p74720 Brassica napus HOM05D010646 ORTHO05D001770 3.8e-08 62.4 59 52.5
CSS0043215 Camellia sinensis var. sinensis HOM05D002277 ORTHO05D001770 3.8e-08 62.4 52 63.5
Oeu033238.1 Olea europaea HOM05D002277 ORTHO05D001770 3.8e-08 62.4 42 71.4
MSTRG.27280 Avicennia marina HOM05D002277 ORTHO05D001770 8.5e-08 61.2 42 73.8
BcaNung03299 Brassica carinata HOM05D010646 ORTHO05D001770 8.5e-08 61.2 59 52.5
BcaNung03304 Brassica carinata HOM05D000389 ORTHO05D000287 8.5e-08 61.2 59 52.5
BolC9t60204H Brassica oleracea HOM05D010646 ORTHO05D001770 8.5e-08 61.2 59 52.5
MSTRG.8902 Avicennia marina HOM05D002277 ORTHO05D001770 1.9e-07 60.1 42 71.4
CSS0000970 Camellia sinensis var. sinensis HOM05D002277 ORTHO05D001770 1.9e-07 60.1 52 61.5
Cc02_g05610 Coffea canephora HOM05D002277 ORTHO05D001770 1.9e-07 60.1 42 69.0
Zm00001eb350250 Zea mays HOM05D002277 ORTHO05D001770 1.9e-07 60.1 53 58.5
AT5G01790 Arabidopsis thaliana HOM05D010646 ORTHO05D001770 2.5e-07 59.7 57 56.1
BcaC06g31954 Brassica carinata HOM05D010646 ORTHO05D001770 4.2e-07 58.9 59 50.8
Rhsim09G0183700 Rhododendron simsii HOM05D002277 ORTHO05D001770 4.2e-07 58.9 45 64.4
Sed0016478 Sechium edule HOM05D002277 ORTHO05D001770 5.5e-07 58.5 47 63.8
Oeu058656.1 Olea europaea HOM05D002277 ORTHO05D001770 9.4e-07 57.8 42 66.7
CiPaw.01G304400 Carya illinoinensis HOM05D002277 ORTHO05D001770 1.6e-06 57.0 45 62.2
AL6G10240 Arabidopsis lyrata HOM05D010646 ORTHO05D001770 2.1e-06 56.6 41 70.7
Carub.0006s0004 Capsella rubella HOM05D010646 ORTHO05D001770 2.1e-06 56.6 41 70.7
PSO339G6062 Papaver somniferum HOM05D002277 ORTHO05D001770 2.7e-06 56.2 45 64.4
PSO384G4841 Papaver somniferum HOM05D002277 ORTHO05D001770 2.7e-06 56.2 45 64.4
ClCG11G005770 Citrullus lanatus HOM05D002277 ORTHO05D001770 3.6e-06 55.8 45 62.2
Nitab4.5_0000263g0230 Nicotiana tabacum HOM05D002277 ORTHO05D001770 3.6e-06 55.8 42 64.3
Nitab4.5_0004650g0010 Nicotiana tabacum HOM05D002277 ORTHO05D001770 3.6e-06 55.8 42 64.3
BolC3t12591H Brassica oleracea HOM05D010646 ORTHO05D001770 4.7e-06 55.5 42 66.7
FAN03G3432 Fragaria x ananassa HOM05D002277 ORTHO05D001770 4.7e-06 55.5 68 45.6
Medtr5g083970 Medicago truncatula HOM05D002277 ORTHO05D001770 4.7e-06 55.5 50 56.0
Phvul.001G249100 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 4.7e-06 55.5 45 62.2
Sed0026001 Sechium edule HOM05D002277 ORTHO05D001770 4.7e-06 55.5 47 61.7
Solyc06g050370.1 Solanum lycopersicum HOM05D002277 ORTHO05D001770 4.7e-06 55.5 42 64.3
BcaB01g06253 Brassica carinata HOM05D010646 ORTHO05D001770 6.1e-06 55.1 42 66.7
C03p00220 Brassica napus HOM05D010646 ORTHO05D001770 6.1e-06 55.1 42 66.7
Haze_02921 Corylus avellana HOM05D002277 ORTHO05D001770 6.1e-06 55.1 44 63.6
Thecc.10G174900 Theobroma cacao HOM05D002277 ORTHO05D001770 6.1e-06 55.1 53 50.9
COL.COLO4_03891 Corchorus olitorius HOM05D002277 ORTHO05D001770 8.0e-06 54.7 53 50.9
MELO3C019998.2 Cucumis melo HOM05D002277 ORTHO05D001770 8.0e-06 54.7 45 60.0
CsaV3_6G002200 Cucumis sativus L. HOM05D002277 ORTHO05D001770 8.0e-06 54.7 45 60.0
FAN10G1465 Fragaria x ananassa HOM05D002277 ORTHO05D001770 8.0e-06 54.7 68 47.1
Peaxi162Scf00464g00005 Petunia axillaris HOM05D002277 ORTHO05D001770 8.0e-06 54.7 42 66.7
QL08p064469 Quercus lobata HOM05D002277 ORTHO05D001770 8.0e-06 54.7 45 62.2


User provided reference genes

Program Settings