Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 5.1e-190 667.5 328 100.0
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 9.8e-149 530.4 330 77.9
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 1.6e-146 523.1 329 77.8
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 2.3e-142 509.2 329 73.3
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 6.8e-142 507.7 329 74.8
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 5.4e-139 498.0 377 68.2
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 9.8e-125 450.7 328 65.5
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 6.8e-110 401.4 328 59.5
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 8.9e-110 401.0 328 59.5
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 8.9e-110 401.0 328 61.0
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 8.9e-110 401.0 328 60.7
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 1.2e-109 400.6 328 61.0
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 4.9e-108 395.2 329 59.3
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 2.5e-104 382.9 328 58.2
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 1.6e-103 380.2 333 58.3
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 1.4e-102 377.1 329 58.1
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 1.6e-98 363.6 343 57.1
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 2.3e-97 359.8 338 55.0
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 1.5e-96 357.1 282 62.8
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 6.9e-94 348.2 337 54.6
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 2.6e-93 346.3 308 55.8
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 1.9e-91 340.1 330 53.0
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 2.7e-90 336.3 334 52.7
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 1.0e-89 334.3 320 54.4
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 1.7e-89 333.6 179 91.6
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 3.0e-89 332.8 336 51.8
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 5.1e-89 332.0 331 52.6
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.9e-88 330.1 329 51.7
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 4.3e-88 328.9 337 50.4
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 4.3e-88 328.9 328 50.6
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 7.4e-88 328.2 325 54.2
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 2.8e-87 326.2 332 50.3
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 3.6e-87 325.9 332 51.5
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 3.6e-87 325.9 339 50.1
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 4.8e-87 325.5 307 54.1
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 1.1e-86 324.3 345 49.9
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 1.1e-86 324.3 337 51.3
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 1.8e-86 323.6 329 52.0
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 2.4e-86 323.2 337 50.1
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 3.1e-86 322.8 345 49.0
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 4.0e-86 322.4 338 50.0
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 5.3e-86 322.0 329 50.8
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 5.3e-86 322.0 361 48.2
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 6.9e-86 321.6 356 50.0
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 9.0e-86 321.2 346 49.7
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 9.0e-86 321.2 344 49.4
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 1.2e-85 320.9 312 52.2
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 2.6e-85 319.7 348 48.0
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 4.5e-85 318.9 317 51.4
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 5.8e-85 318.5 306 52.6
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 7.6e-85 318.2 308 52.9
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 1.3e-84 317.4 339 48.1
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 2.2e-84 316.6 352 48.9
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 2.9e-84 316.2 317 52.1
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 6.4e-84 315.1 361 47.4
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 1.9e-83 313.5 317 51.4
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 4.2e-83 312.4 336 48.8
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 2.1e-82 310.1 337 48.7
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 2.7e-82 309.7 319 50.5
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 6.0e-82 308.5 350 47.4
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 1.0e-81 307.8 325 49.5
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 2.3e-81 306.6 337 48.7
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 3.0e-81 306.2 335 47.5
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 3.0e-81 306.2 255 57.6
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 5.1e-81 305.4 308 51.0
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 6.7e-81 305.1 355 46.2
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 1.1e-80 304.3 337 47.8
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 1.5e-80 303.9 335 47.2
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 1.9e-80 303.5 320 49.7
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 2.5e-80 303.1 335 48.7
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 3.3e-80 302.8 333 47.7
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 4.3e-80 302.4 357 45.9
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 5.6e-80 302.0 355 45.6
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 7.4e-80 301.6 320 49.7
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 9.6e-80 301.2 316 48.7
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 2.8e-79 299.7 340 48.2
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 2.8e-79 299.7 318 49.4
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 6.2e-79 298.5 318 49.7
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 6.2e-79 298.5 333 47.4
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 1.1e-78 297.7 289 51.2
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 1.8e-78 297.0 338 47.3
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 4.5e-77 292.4 344 47.1
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 1.3e-76 290.8 338 46.4
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 3.8e-76 289.3 321 49.5
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 3.2e-75 286.2 260 55.8
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 7.1e-75 285.0 337 46.0
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 9.3e-75 284.6 319 47.3
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 9.3e-75 284.6 316 47.5
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 2.1e-74 283.5 317 47.0
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 4.6e-74 282.3 349 43.8
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 7.9e-74 281.6 353 44.8
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.8e-73 280.4 324 46.0
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 2.8e-71 273.1 353 44.8
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 3.7e-71 272.7 348 44.8
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 1.1e-70 271.2 344 44.2
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 6.5e-68 261.9 345 43.8
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 1.4e-67 260.8 356 41.3
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 1.0e-65 254.6 381 39.1
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 1.3e-65 254.2 362 40.1
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 1.0e-60 238.0 334 42.2
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 4.6e-58 229.2 219 53.4
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 7.9e-58 228.4 284 45.1
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 3.2e-51 206.5 191 52.9
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 6.7e-49 198.7 103 91.3
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 9.1e-46 188.3 330 36.1
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 7.7e-45 185.3 330 36.1
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 1.7e-44 184.1 324 38.6
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 9.4e-43 178.3 333 35.7
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 4.7e-42 176.0 251 36.3
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 5.0e-36 156.0 212 43.4
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 4.2e-35 152.9 219 35.6
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 7.2e-35 152.1 217 39.2
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 7.2e-35 152.1 201 38.8
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.7e-34 150.2 206 37.9
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.4e-33 147.9 200 38.5
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.1e-30 138.3 200 38.5
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.4e-30 137.9 217 33.2
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 3.1e-30 136.7 217 34.6
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 4.1e-30 136.3 215 37.7
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 4.7e-26 122.9 208 32.2
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 9.8e-24 115.2 121 45.5
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 5.4e-22 109.4 152 35.5
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 1.9e-19 100.9 151 35.8
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 4.7e-18 96.3 118 45.8
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 1.4e-17 94.7 86 54.7
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 4.0e-17 93.2 117 42.7


User provided reference genes

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