Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12340 Utricularia gibba HOM05D004773 ORTHO05D005943 1.6e-103 379.4 185 100.0
SalBow8G5056 Salvia bowleyana HOM05D004773 ORTHO05D005943 3.8e-65 251.9 150 78.0
Oeu053928.1 Olea europaea HOM05D004773 ORTHO05D005943 2.1e-63 246.1 150 73.3
MSTRG.7300 Avicennia marina HOM05D004773 ORTHO05D005943 3.5e-63 245.4 150 75.3
Nitab4.5_0005399g0010 Nicotiana tabacum HOM05D004773 ORTHO05D005943 1.3e-62 243.4 150 72.7
Migut.M01200 Erythranthe guttata HOM05D004773 ORTHO05D005943 8.7e-62 240.7 150 76.0
Peaxi162Scf00527g00065 Petunia axillaris HOM05D004773 ORTHO05D005943 8.7e-62 240.7 150 72.7
Cc02_g12570 Coffea canephora HOM05D004773 ORTHO05D005943 1.1e-61 240.4 150 72.0
Nitab4.5_0003676g0020 Nicotiana tabacum HOM05D004773 ORTHO05D005943 2.5e-61 239.2 150 70.7
ECA234G3816 Erigeron canadensis HOM05D004773 ORTHO05D005943 4.3e-61 238.4 150 73.3
Lj1P1212T41 Lonicera japonica HOM05D004773 ORTHO05D005943 9.6e-61 237.3 149 71.8
AUR62014736 Chenopodium quinoa HOM05D004773 ORTHO05D005943 1.3e-60 236.9 149 68.5
Lsat_1_v5_gn_4_57340 Lactuca sativa HOM05D004773 ORTHO05D005943 1.1e-59 233.8 150 69.3
HanXRQChr12g0364651 Helianthus annuus HOM05D004773 ORTHO05D005943 1.4e-59 233.4 150 70.7
HanXRQChr17g0555701 Helianthus annuus HOM05D004773 ORTHO05D005943 1.4e-59 233.4 150 70.0
AUR62016916 Chenopodium quinoa HOM05D004773 ORTHO05D005943 1.8e-59 233.0 149 68.5
QL09p005927 Quercus lobata HOM05D004773 ORTHO05D005943 1.8e-59 233.0 150 72.0
Sopen02g023790 Solanum pennellii HOM05D004773 ORTHO05D005943 6.9e-59 231.1 148 69.6
PGSC0003DMG400022363 Solanum tuberosum HOM05D004773 ORTHO05D005943 6.9e-59 231.1 148 69.6
Actinidia11804 Actinidia chinensis HOM05D004773 ORTHO05D005943 9.0e-59 230.7 150 68.7
CAN.G1181.18 Capsicum annuum HOM05D004773 ORTHO05D005943 9.0e-59 230.7 148 70.3
TAR317G0002 Trochodendron aralioides HOM05D004773 ORTHO05D005943 5.8e-58 228.0 150 67.3
MD15G1141100 Malus domestica HOM05D004773 ORTHO05D005943 7.6e-58 227.6 150 69.3
Solyc02g078980.3 Solanum lycopersicum HOM05D004773 ORTHO05D005943 7.6e-58 227.6 148 68.9
Hma1.2p1_0144F.1_g064840 Hydrangea macrophylla HOM05D004773 ORTHO05D005943 1.3e-57 226.9 150 69.3
CiPaw.05G210200 Carya illinoinensis HOM05D004773 ORTHO05D005943 1.7e-57 226.5 150 68.0
vmacro15870 Vaccinium macrocarpon HOM05D004773 ORTHO05D005943 2.9e-57 225.7 150 68.0
Atru.chr2.1725 Acer truncatum HOM05D004773 ORTHO05D005943 3.8e-57 225.3 149 68.5
Gohir.D11G235500 Gossypium hirsutum HOM05D004773 ORTHO05D005943 3.8e-57 225.3 149 67.8
Aqoxy5G04203 Aquilegia oxysepala HOM05D004773 ORTHO05D005943 4.9e-57 224.9 151 68.2
Duzib128G1941 Durio zibethinus HOM05D004773 ORTHO05D005943 4.9e-57 224.9 147 68.0
Gorai.007G248200 Gossypium raimondii HOM05D004773 ORTHO05D005943 4.9e-57 224.9 149 67.8
Cpa.g.sc73.89 Carica papaya HOM05D004773 ORTHO05D005943 8.4e-57 224.2 149 66.4
Cfa016123 Carpinus fangiana HOM05D004773 ORTHO05D005943 8.4e-57 224.2 150 68.7
Haze_00339 Corylus avellana HOM05D004773 ORTHO05D005943 1.1e-56 223.8 150 68.7
Gohir.A11G222000 Gossypium hirsutum HOM05D004773 ORTHO05D005943 1.4e-56 223.4 149 67.1
Rhsim02G0120400 Rhododendron simsii HOM05D000873 ORTHO05D002948 1.9e-56 223.0 150 68.0
Thecc.05G229300 Theobroma cacao HOM05D004773 ORTHO05D005943 1.9e-56 223.0 149 66.4
SGA_v2.0_scaffold114G31969 Striga asiatica HOM05D004773 ORTHO05D005943 4.2e-56 221.9 150 67.3
Potri.013G073800 Populus trichocarpa HOM05D004773 ORTHO05D005943 7.1e-56 221.1 149 68.5
Eucgr.F01970 Eucalyptus grandis HOM05D004773 ORTHO05D005943 9.3e-56 220.7 149 66.4
MBI04_g12483_MAGBIO Magnolia biondii HOM05D004773 ORTHO05D005943 9.3e-56 220.7 150 64.0
DCAR_024890 Daucus carota HOM05D004773 ORTHO05D005943 1.2e-55 220.3 150 64.0
Manes.08G158200 Manihot esculenta HOM05D004773 ORTHO05D005943 2.1e-55 219.5 149 67.8
PSO782G1422 Papaver somniferum HOM05D004773 ORTHO05D005943 6.0e-55 218.0 151 67.5
Prupe.7G272000 Prunus persica HOM05D004773 ORTHO05D005943 6.0e-55 218.0 150 68.0
Hund21271 Selenicereus undatus HOM05D004773 ORTHO05D005943 6.0e-55 218.0 149 63.1
Ciclev10032178m.g Citrus clementina HOM05D004773 ORTHO05D005943 7.9e-55 217.6 149 66.4
AT5G17570 Arabidopsis thaliana HOM05D004773 ORTHO05D005943 1.3e-54 216.9 149 65.8
Carub.0006s1581 Capsella rubella HOM05D004773 ORTHO05D005943 1.3e-54 216.9 149 65.8
MELO3C006226.2 Cucumis melo HOM05D004773 ORTHO05D005943 1.3e-54 216.9 149 63.1
HPP92_001431 Vanilla planifolia HOM05D004773 ORTHO05D005943 1.3e-54 216.9 149 65.8
CsaV3_3G010040 Cucumis sativus L. HOM05D004773 ORTHO05D005943 2.3e-54 216.1 149 63.1
ECA234G0571 Erigeron canadensis HOM05D000140 ORTHO05D000087 2.3e-54 216.1 150 65.3
Lj2g0008141 Lotus japonicus HOM05D004773 ORTHO05D005943 2.3e-54 216.1 150 65.3
Os04g0577500 Oryza sativa ssp. japonica HOM05D004773 ORTHO05D005943 3.0e-54 215.7 150 64.7
Medtr6g033025 Medicago truncatula HOM05D004773 ORTHO05D005943 3.9e-54 215.3 150 64.0
AL6G28660 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 5.1e-54 214.9 149 65.1
Glyma.16G151100 Glycine max HOM05D004773 ORTHO05D005943 5.1e-54 214.9 150 64.7
Sc17g0006500 Simmondsia chinensis HOM05D004773 ORTHO05D005943 5.1e-54 214.9 149 65.1
TWI32G1059 Tripterygium wilfordii HOM05D004773 ORTHO05D005943 5.1e-54 214.9 149 65.8
BcaB08g36761 Brassica carinata HOM05D004773 ORTHO05D005943 6.7e-54 214.5 149 65.8
Nn2g15176 Nelumbo nucifera HOM05D004773 ORTHO05D005943 6.7e-54 214.5 149 63.8
PSO063G3794 Papaver somniferum HOM05D004773 ORTHO05D005943 6.7e-54 214.5 151 66.9
BcaC04g18778 Brassica carinata HOM05D004773 ORTHO05D005943 8.7e-54 214.2 149 65.8
C09p59580 Brassica napus HOM05D004773 ORTHO05D005943 8.7e-54 214.2 149 65.8
BolC9t58797H Brassica oleracea HOM05D004773 ORTHO05D005943 8.7e-54 214.2 149 65.8
Sed0007971 Sechium edule HOM05D004773 ORTHO05D005943 1.1e-53 213.8 149 62.4
A10p21830 Brassica napus HOM05D004773 ORTHO05D008759 1.9e-53 213.0 149 65.1
AUR62012595 Chenopodium quinoa HOM05D004773 ORTHO05D005943 2.5e-53 212.6 149 61.7
Lalb_Chr06g0173871 Lupinus albus HOM05D004773 ORTHO05D005943 2.5e-53 212.6 150 63.3
Sp6g26650 Schrenkiella parvula HOM05D004773 ORTHO05D005943 4.3e-53 211.8 149 65.1
HPP92_001439 Vanilla planifolia HOM05D004773 ORTHO05D005943 4.3e-53 211.8 149 63.8
Thhalv10014121m.g Eutrema salsugineum HOM05D004773 ORTHO05D005943 5.7e-53 211.5 149 64.4
Phvul.004G078000 Phaseolus vulgaris HOM05D004773 ORTHO05D005943 2.1e-52 209.5 149 62.4
PGR102G2546 Punica granatum HOM05D004773 ORTHO05D005943 2.8e-52 209.1 149 63.8
Eucgr.F01964 Eucalyptus grandis HOM05D004773 ORTHO05D005943 3.7e-52 208.8 149 61.1
Sabra13G0063900 Salix brachista HOM05D004773 ORTHO05D008759 4.8e-52 208.4 149 65.8
arahy.Tifrunner.gnm1.ann1.KNV4WG Arachis hypogaea HOM05D004773 ORTHO05D005943 6.3e-52 208.0 149 63.8
THA.LOC104802901 Tarenaya hassleriana HOM05D004773 ORTHO05D005943 8.2e-52 207.6 147 62.6
Zm00001eb073330 Zea mays HOM05D004773 ORTHO05D005943 8.2e-52 207.6 149 62.4
Aa31LG11G12090 Aethionema arabicum HOM05D004773 ORTHO05D005943 1.1e-51 207.2 149 63.1
arahy.Tifrunner.gnm1.ann1.WJU3K5 Arachis hypogaea HOM05D004773 ORTHO05D005943 1.8e-51 206.5 149 63.8
CANSAT01G2664 Cannabis sativa HOM05D004773 ORTHO05D005943 1.8e-51 206.5 149 63.8
CDE07G0301 Ceratophyllum demersum HOM05D004773 ORTHO05D005943 1.8e-51 206.5 149 60.4
Cc02_g14730 Coffea canephora HOM05D004773 ORTHO05D005943 4.1e-51 205.3 149 63.8
Psat1g096800 Pisum sativum HOM05D004773 ORTHO05D005943 6.9e-51 204.5 150 62.0
ATR0620G003 Amborella trichopoda HOM05D004773 ORTHO05D005943 2.0e-50 203.0 149 62.4
FvH4_6g13930 Fragaria vesca HOM05D004773 ORTHO05D005943 2.0e-50 203.0 150 66.0
FAN14G1019 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.0e-50 203.0 150 66.0
Ca_04503_v3 Cicer arietinum L. HOM05D004773 ORTHO05D005943 2.6e-50 202.6 150 60.0
ClCG05G002600 Citrullus lanatus HOM05D004773 ORTHO05D005943 3.4e-50 202.2 169 54.4
FAN05G1629 Fragaria x ananassa HOM05D004773 ORTHO05D005943 3.4e-50 202.2 150 65.3
FAN05G3354 Fragaria x ananassa HOM05D004773 ORTHO05D005943 3.4e-50 202.2 150 65.3
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 3.4e-50 202.2 150 65.3
PSO063G1994 Papaver somniferum HOM05D004773 ORTHO05D005943 3.4e-50 202.2 150 60.7
FAN02G0119 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.3e-49 200.3 150 65.3
FAN09G4020 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.3e-49 200.3 150 65.3
FvH4_6g14060 Fragaria vesca HOM05D004773 ORTHO05D005943 6.5e-49 198.0 150 64.0
FAN14G4391 Fragaria x ananassa HOM05D004773 ORTHO05D005943 6.5e-49 198.0 150 64.0
Duzib177G1208 Durio zibethinus HOM05D004773 ORTHO05D005943 8.5e-49 197.6 149 59.7
THA.LOC104802900 Tarenaya hassleriana HOM05D004773 ORTHO05D005943 1.9e-48 196.4 149 60.4
VMungo0464G1467 Vigna mungo HOM05D004773 ORTHO05D005943 3.2e-48 195.7 176 52.3
GSVIVG01019376001 Vitis vinifera HOM05D004773 ORTHO05D005943 7.2e-48 194.5 132 64.4
A06p26410 Brassica napus HOM05D004773 ORTHO05D005943 1.2e-47 193.7 149 59.1
BNapus_Darmor_BZH_scaffold_78p00160 Brassica napus HOM05D004773 ORTHO05D005943 1.2e-47 193.7 149 59.1
FAN09G3809 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.2e-47 193.7 150 62.7
COL.COLO4_31150 Corchorus olitorius HOM05D004773 ORTHO05D005943 1.6e-47 193.4 144 59.7
Thecc.05G229900 Theobroma cacao HOM05D004773 ORTHO05D005943 2.1e-47 193.0 150 58.0
Aa31LG5G14030 Aethionema arabicum HOM05D004773 ORTHO05D005943 3.6e-47 192.2 149 58.4
AT3G03500 Arabidopsis thaliana HOM05D004773 ORTHO05D005943 3.6e-47 192.2 149 58.4
Gohir.D13G163600 Gossypium hirsutum HOM05D004773 ORTHO05D005943 3.6e-47 192.2 149 57.7
Carub.0003s0264 Capsella rubella HOM05D004773 ORTHO05D005943 6.1e-47 191.4 149 57.7
BNapus_Darmor_BZH_scaffold_162p00180 Brassica napus HOM05D004773 ORTHO05D005943 3.0e-46 189.1 150 58.7
BolC1t05828H Brassica oleracea HOM05D004773 ORTHO05D005943 3.0e-46 189.1 150 58.7
BraA01t04577Z Brassica rapa HOM05D004773 ORTHO05D005943 3.0e-46 189.1 144 59.0
FAN09G2979 Fragaria x ananassa HOM05D004773 ORTHO05D005943 3.9e-46 188.7 150 62.7
AL3G12620 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 5.1e-46 188.3 149 57.7
BcaC09g47749 Brassica carinata HOM05D004773 ORTHO05D005943 6.7e-46 188.0 149 57.0
Gohir.A13G158600 Gossypium hirsutum HOM05D004773 ORTHO05D005943 6.7e-46 188.0 149 57.0
SMO367G0365 Selaginella moellendorffii HOM05D004773 ORTHO05D005943 4.3e-45 185.3 147 55.8
Pp3c12_11300 Physcomitrium patens HOM05D004773 ORTHO05D005943 5.7e-45 184.9 149 55.0
FAN02G4326 Fragaria x ananassa HOM05D004773 ORTHO05D005943 8.2e-44 181.0 142 64.1
Gorai.013G199600 Gossypium raimondii HOM05D004773 ORTHO05D005943 8.2e-44 181.0 149 55.7
Mapoly0004s0110 Marchantia polymorpha HOM05D004773 ORTHO05D005943 1.2e-42 177.2 149 55.7
AagrBONN_evm.TU.Sc2ySwM_362.2127 Anthoceros agrestis HOM05D004773 ORTHO05D005943 1.9e-40 169.9 147 52.4
SHI39094 Sapria himalayana HOM05D004773 ORTHO05D005943 1.2e-39 167.2 196 46.9
AUR62014597 Chenopodium quinoa HOM05D004773 ORTHO05D005943 3.0e-38 162.5 111 62.2
CARHR195610 Cardamine hirsuta HOM05D004773 ORTHO05D005943 3.3e-37 159.1 110 64.5
CBR_g32162 Chara braunii HOM05D004773 ORTHO05D001111 5.7e-37 158.3 148 53.4
AUR62014585 Chenopodium quinoa HOM05D004773 ORTHO05D005943 7.4e-37 157.9 111 62.2
CAN.G1247.2 Capsicum annuum HOM05D004773 ORTHO05D005943 6.9e-35 151.4 112 58.9
Dinv40507 Davidia involucrata HOM05D004773 ORTHO05D005943 8.5e-33 144.4 150 52.7
TPR.G6097 Trifolium pratense HOM05D004773 ORTHO05D005943 1.3e-28 130.6 100 58.0
Thhalv10021316m.g Eutrema salsugineum HOM05D004773 ORTHO05D005943 5.9e-26 121.7 100 55.0
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 2.6e-21 106.3 72 66.7
HPP92_010162 Vanilla planifolia HOM05D004773 ORTHO05D005943 3.3e-21 105.9 78 57.7
PRCOL_00005876 Prasinoderma coloniale HOM05D004773 ORTHO05D005943 1.2e-15 87.4 157 36.3
TPR.G35071 Trifolium pratense HOM05D004773 ORTHO05D005943 8.0e-15 84.7 57 66.7
Sp3g02490 Schrenkiella parvula HOM05D004773 ORTHO05D005943 1.4e-14 84.0 201 30.8
PGSC0003DMG400004239 Solanum tuberosum HOM05D004773 ORTHO05D005943 3.4e-13 79.3 52 65.4
Cre17.g717200 Chlamydomonas reinhardtii HOM05D004773 ORTHO05D005943 5.7e-13 78.6 192 28.1
MCO10G115 Micromonas commoda HOM05D004773 ORTHO05D005943 1.4e-11 73.9 163 30.7
AL3G13200 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 3.8e-09 65.9 48 56.2
SEGI_31644 Sequoiadendron giganteum HOM05D004773 ORTHO05D005943 5.0e-09 65.5 63 47.6
Cre03.g169800 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D005943 1.6e-07 60.5 151 29.8


User provided reference genes

Program Settings