Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 2.8e-123 445.3 221 100.0
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 7.2e-47 191.4 125 76.0
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 3.0e-45 186.0 173 56.1
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 8.8e-45 184.5 126 72.2
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.5e-44 183.7 126 72.2
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 2.0e-44 183.3 121 72.7
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 3.7e-43 179.1 108 77.8
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 6.3e-43 178.3 107 76.6
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 1.8e-42 176.8 110 76.4
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 2.4e-42 176.4 127 66.1
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 3.1e-42 176.0 187 53.5
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 5.4e-42 175.3 106 78.3
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 7.0e-42 174.9 110 74.5
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.2e-41 174.1 108 73.1
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.2e-41 174.1 107 74.8
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 1.2e-41 174.1 107 74.8
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 1.2e-41 174.1 110 73.6
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 2.0e-41 173.3 129 65.1
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 2.7e-41 172.9 105 75.2
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 2.7e-41 172.9 107 75.7
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 5.9e-41 171.8 108 72.2
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 5.9e-41 171.8 100 80.0
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 5.9e-41 171.8 108 72.2
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 5.9e-41 171.8 132 62.1
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 7.7e-41 171.4 150 60.0
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 7.7e-41 171.4 138 63.0
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.0e-40 171.0 108 73.1
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 1.3e-40 170.6 102 79.4
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.7e-40 170.2 108 71.3
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 1.7e-40 170.2 108 73.1
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 2.3e-40 169.9 105 78.1
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 2.3e-40 169.9 100 80.0
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 3.8e-40 169.1 105 78.1
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 3.8e-40 169.1 105 75.2
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 5.0e-40 168.7 102 78.4
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 5.0e-40 168.7 104 75.0
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 6.6e-40 168.3 108 71.3
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 6.6e-40 168.3 121 66.1
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 6.6e-40 168.3 104 75.0
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 8.6e-40 167.9 104 74.0
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 8.6e-40 167.9 111 72.1
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.1e-39 167.5 126 65.9
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 1.1e-39 167.5 108 73.1
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 1.9e-39 166.8 99 78.8
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 2.5e-39 166.4 95 82.1
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 3.3e-39 166.0 106 72.6
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 3.3e-39 166.0 100 74.0
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 9.5e-39 164.5 99 77.8
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 9.5e-39 164.5 105 73.3
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 1.6e-38 163.7 99 75.8
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 1.6e-38 163.7 101 75.2
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 1.6e-38 163.7 116 68.1
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.6e-38 162.5 121 62.8
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 4.7e-38 162.2 101 77.2
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 4.7e-38 162.2 104 71.2
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 4.7e-38 162.2 104 71.2
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 6.1e-38 161.8 99 75.8
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 8.0e-38 161.4 99 76.8
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 8.0e-38 161.4 119 65.5
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 8.0e-38 161.4 103 73.8
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 8.0e-38 161.4 116 62.9
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 1.0e-37 161.0 96 79.2
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 1.4e-37 160.6 107 71.0
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 1.4e-37 160.6 114 68.4
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 1.8e-37 160.2 99 75.8
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 1.8e-37 160.2 107 72.9
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 1.8e-37 160.2 107 72.9
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.3e-37 159.8 124 64.5
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 2.3e-37 159.8 98 73.5
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 2.3e-37 159.8 117 66.7
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 2.3e-37 159.8 96 77.1
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 3.0e-37 159.5 101 77.2
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 3.0e-37 159.5 107 72.0
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 4.0e-37 159.1 111 69.4
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 5.2e-37 158.7 104 70.2
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 6.8e-37 158.3 107 72.0
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 8.9e-37 157.9 106 73.6
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 8.9e-37 157.9 106 73.6
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 8.9e-37 157.9 106 73.6
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 8.9e-37 157.9 106 73.6
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 8.9e-37 157.9 101 75.2
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 1.2e-36 157.5 111 66.7
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 1.5e-36 157.1 104 73.1
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 1.5e-36 157.1 95 77.9
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 1.5e-36 157.1 100 70.0
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 2.6e-36 156.4 126 61.9
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 3.4e-36 156.0 131 59.5
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 9.8e-36 154.5 100 67.0
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 2.2e-35 153.3 109 70.6
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.4e-34 150.6 95 75.8
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 1.4e-34 150.6 136 57.4
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.4e-34 150.6 92 73.9
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 1.4e-34 150.6 152 52.6
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 1.8e-34 150.2 107 63.6
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 2.4e-34 149.8 107 67.3
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 2.4e-34 149.8 101 71.3
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 4.1e-34 149.1 107 67.3
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 9.2e-34 147.9 169 49.1
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 3.0e-32 142.9 142 53.5
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.5e-31 140.6 108 63.9
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 3.6e-30 136.0 82 78.0
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 1.8e-29 133.7 80 80.0
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 1.2e-28 131.0 76 80.3
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.2e-28 131.0 80 78.8
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 3.7e-27 125.9 111 59.5
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 3.2e-26 122.9 99 58.6
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 1.2e-25 120.9 84 71.4
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 1.6e-25 120.6 117 53.8
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.5e-23 113.2 84 65.5
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 2.8e-22 109.8 65 80.0
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 8.1e-22 108.2 65 80.0
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 1.4e-21 107.5 67 74.6
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 6.8e-21 105.1 136 44.9
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 8.9e-21 104.8 62 79.0
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 2.9e-19 99.8 99 47.5
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 4.1e-18 95.9 65 66.2
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 4.1e-18 95.9 83 59.0
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 1.6e-17 94.0 65 70.8
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 8.6e-16 88.2 100 43.0
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 5.6e-15 85.5 97 38.1
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.2e-14 84.3 57 70.2
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 1.6e-14 84.0 65 63.1
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.4e-13 80.9 104 44.2
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.6e-12 76.6 89 36.0
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 7.6e-12 75.1 59 64.4


User provided reference genes

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