Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12281 Utricularia gibba HOM05D003193 ORTHO05D004924 0.0e+00 1312.4 672 100.0
Migut.F02049 Erythranthe guttata HOM05D003193 ORTHO05D004924 5.7e-196 688.3 808 49.6
SalBow1G5750 Salvia bowleyana HOM05D003193 ORTHO05D004924 2.6e-188 662.9 808 47.4
SGA_v2.0_scaffold62G21472 Striga asiatica HOM05D003193 ORTHO05D004924 6.2e-182 641.7 836 45.5
Actinidia03822 Actinidia chinensis HOM05D003193 ORTHO05D004924 9.9e-164 581.3 724 45.7
QL03p032698 Quercus lobata HOM05D003193 ORTHO05D004924 4.1e-162 575.9 799 43.6
GSVIVG01026340001 Vitis vinifera HOM05D003193 ORTHO05D004924 1.2e-161 574.3 806 43.2
TPR.G4710 Trifolium pratense HOM05D003193 ORTHO05D004924 2.7e-161 573.2 800 43.1
Dinv06951 Davidia involucrata HOM05D003193 ORTHO05D004924 3.5e-161 572.8 799 43.3
Atru.chr2.1127 Acer truncatum HOM05D003193 ORTHO05D004924 1.3e-160 570.9 720 46.2
Peaxi162Scf00071g02610 Petunia axillaris HOM05D003193 ORTHO05D004924 5.1e-160 568.9 824 41.3
Glyma.03G252300 Glycine max HOM05D003193 ORTHO05D004924 1.1e-159 567.8 800 42.4
Solyc04g050520.3 Solanum lycopersicum HOM05D003193 ORTHO05D004924 1.5e-159 567.4 800 42.0
Sopen04g021290 Solanum pennellii HOM05D003193 ORTHO05D004924 2.5e-159 566.6 792 41.8
TAR636G0188 Trochodendron aralioides HOM05D003193 ORTHO05D004924 4.3e-159 565.8 799 42.8
Lalb_Chr04g0261971 Lupinus albus HOM05D003193 ORTHO05D004924 9.6e-159 564.7 801 41.9
CAN.G131.15 Capsicum annuum HOM05D003193 ORTHO05D004924 3.6e-158 562.8 797 41.7
Glyma.19G249900 Glycine max HOM05D003193 ORTHO05D004924 1.8e-157 560.5 800 41.8
Duzib177G0185 Durio zibethinus HOM05D003193 ORTHO05D004924 3.1e-157 559.7 780 42.2
Thecc.05G265800 Theobroma cacao HOM05D003193 ORTHO05D004924 6.9e-157 558.5 785 42.4
Psat0s4268g0040 Pisum sativum HOM05D003193 ORTHO05D004924 8.9e-157 558.1 801 41.8
Ca_09471_v3 Cicer arietinum L. HOM05D003193 ORTHO05D004924 1.2e-156 557.8 801 41.8
vmacro19973 Vaccinium macrocarpon HOM05D003193 ORTHO05D004924 5.8e-156 555.4 754 43.1
Prupe.6G353600 Prunus persica HOM05D003193 ORTHO05D004924 3.8e-155 552.7 716 44.6
TAR365G0326 Trochodendron aralioides HOM05D003193 ORTHO05D004924 3.8e-155 552.7 799 41.3
Ciclev10018428m.g Citrus clementina HOM05D003193 ORTHO05D004924 8.4e-155 551.6 804 41.9
Medtr7g116425 Medicago truncatula HOM05D003193 ORTHO05D004924 2.4e-154 550.1 801 41.6
Cc09_g03080 Coffea canephora HOM05D003193 ORTHO05D004924 3.2e-154 549.7 718 43.7
Lj1g0024446 Lotus japonicus HOM05D003193 ORTHO05D004924 5.4e-154 548.9 800 42.0
Rhsim05G0170000 Rhododendron simsii HOM05D003193 ORTHO05D004924 9.3e-154 548.1 735 43.4
Lsat_1_v5_gn_9_45981 Lactuca sativa HOM05D003193 ORTHO05D004924 4.6e-153 545.8 798 41.1
Gohir.A11G243500 Gossypium hirsutum HOM05D003193 ORTHO05D004924 1.0e-152 544.7 782 41.4
Phvul.006G107000 Phaseolus vulgaris HOM05D003193 ORTHO05D004924 1.7e-152 543.9 799 40.8
VMungo0540G1922 Vigna mungo HOM05D003193 ORTHO05D004924 3.0e-152 543.1 800 41.2
Sabra19G0034100 Salix brachista HOM05D003193 ORTHO05D004924 6.6e-152 542.0 720 43.9
MD12G1252000 Malus domestica HOM05D003193 ORTHO05D004924 1.9e-151 540.4 718 43.5
COL.COLO4_37867 Corchorus olitorius HOM05D003193 ORTHO05D004924 4.3e-151 539.3 747 42.4
arahy.Tifrunner.gnm1.ann1.9XF1RW Arachis hypogaea HOM05D003193 ORTHO05D004924 9.6e-151 538.1 727 42.6
Potri.019G024200 Populus trichocarpa HOM05D003193 ORTHO05D004924 1.3e-150 537.7 794 41.6
arahy.Tifrunner.gnm1.ann1.ZPSV32 Arachis hypogaea HOM05D003193 ORTHO05D004924 1.6e-150 537.3 727 42.4
RcHm_v2.0_Chr3g0449041 Rosa chinensis HOM05D003193 ORTHO05D004924 1.6e-150 537.3 728 43.3
CANSAT54G2238 Cannabis sativa HOM05D003193 ORTHO05D004924 6.2e-150 535.4 771 41.2
Gorai.007G272000 Gossypium raimondii HOM05D003193 ORTHO05D004924 1.1e-149 534.6 782 41.0
TWI60G0900 Tripterygium wilfordii HOM05D003193 ORTHO05D004924 4.0e-149 532.7 784 42.3
CsaV3_2G010070 Cucumis sativus L. HOM05D003193 ORTHO05D004924 9.0e-149 531.6 787 40.9
Gohir.D11G253200 Gossypium hirsutum HOM05D003193 ORTHO05D004924 1.2e-148 531.2 782 40.9
ClCG11G010250 Citrullus lanatus HOM05D003193 ORTHO05D004924 1.7e-147 527.3 725 42.3
Nn1g03055 Nelumbo nucifera HOM05D003193 ORTHO05D004924 1.7e-147 527.3 799 39.3
Manes.09G146200 Manihot esculenta HOM05D003193 ORTHO05D004924 2.2e-147 526.9 720 43.6
MELO3C008660.2 Cucumis melo HOM05D003193 ORTHO05D004924 2.9e-147 526.6 787 40.8
DCAR_029994 Daucus carota HOM05D003193 ORTHO05D004924 6.4e-147 525.4 820 39.6
HanXRQChr05g0145131 Helianthus annuus HOM05D003193 ORTHO05D004924 8.4e-147 525.0 799 40.4
FvH4_6g01410 Fragaria vesca HOM05D003193 ORTHO05D004924 1.1e-146 524.6 716 42.2
FAN05G0534 Fragaria x ananassa HOM05D003193 ORTHO05D004924 1.1e-146 524.6 716 42.3
Sed0015322 Sechium edule HOM05D003193 ORTHO05D004924 1.1e-146 524.6 787 40.2
FAN05G3617 Fragaria x ananassa HOM05D003193 ORTHO05D004924 1.4e-146 524.2 716 42.3
Eucgr.H04206 Eucalyptus grandis HOM05D003193 ORTHO05D004924 1.9e-146 523.9 791 39.7
Lj2A47G48 Lonicera japonica HOM05D003193 ORTHO05D004924 5.4e-146 522.3 713 43.6
PSO832G2952 Papaver somniferum HOM05D003193 ORTHO05D004924 7.1e-146 521.9 799 39.8
Aqoxy5G00090 Aquilegia oxysepala HOM05D003193 ORTHO05D004924 1.6e-145 520.8 782 40.0
PSO764G0333 Papaver somniferum HOM05D003193 ORTHO05D004924 1.6e-145 520.8 799 39.7
Haze_04476 Corylus avellana HOM05D003193 ORTHO05D004924 2.7e-145 520.0 685 44.7
PGR004G2196 Punica granatum HOM05D003193 ORTHO05D004924 3.5e-145 519.6 803 40.0
FAN02G3021 Fragaria x ananassa HOM05D003193 ORTHO05D004924 1.3e-144 517.7 716 41.9
FAN14G5315 Fragaria x ananassa HOM05D003193 ORTHO05D004924 2.3e-144 516.9 726 41.5
MBI07_g08903_MAGBIO Magnolia biondii HOM05D003193 ORTHO05D004924 2.3e-144 516.9 724 42.7
ECA232G1705 Erigeron canadensis HOM05D003193 ORTHO05D004924 3.9e-144 516.2 794 38.7
FAN14G4461 Fragaria x ananassa HOM05D003193 ORTHO05D004924 1.1e-143 514.6 726 41.5
Hund28419 Selenicereus undatus HOM05D003193 ORTHO05D004924 3.7e-142 509.6 727 40.6
Hund28421 Selenicereus undatus HOM05D003193 ORTHO05D004924 3.7e-142 509.6 727 40.6
THA.LOC104821587 Tarenaya hassleriana HOM05D003193 ORTHO05D004924 1.1e-141 508.1 784 39.2
EL10Ac4g09775 Beta vulgaris HOM05D003193 ORTHO05D004924 6.9e-141 505.4 779 38.5
Cpa.g.sc51.22 Carica papaya HOM05D003193 ORTHO05D004924 1.2e-140 504.6 731 41.9
CSS0037513 Camellia sinensis var. sinensis HOM05D003193 ORTHO05D004924 1.3e-139 501.1 755 41.6
SpUn0003_0310 Schrenkiella parvula HOM05D003193 ORTHO05D004924 5.5e-138 495.7 778 38.6
Thhalv10022486m.g Eutrema salsugineum HOM05D003193 ORTHO05D004924 2.7e-137 493.4 778 38.8
AT1G64790 Arabidopsis thaliana HOM05D003193 ORTHO05D004924 3.5e-137 493.0 778 38.7
Aa31LG2G2030 Aethionema arabicum HOM05D003193 ORTHO05D004924 7.9e-137 491.9 794 38.5
AL2G19160 Arabidopsis lyrata HOM05D003193 ORTHO05D004924 8.7e-136 488.4 778 38.3
FAN09G1546 Fragaria x ananassa HOM05D003193 ORTHO05D004924 4.3e-135 486.1 729 40.3
Carub.0012s0016 Capsella rubella HOM05D003193 ORTHO05D004924 1.3e-134 484.6 778 37.9
AUR62000638 Chenopodium quinoa HOM05D003193 ORTHO05D004924 1.3e-134 484.6 779 38.9
CARHR056150 Cardamine hirsuta HOM05D003193 ORTHO05D004924 8.2e-134 481.9 778 38.2
AUR62006993 Chenopodium quinoa HOM05D003193 ORTHO05D004924 1.4e-133 481.1 779 38.3
BcaB05g23590 Brassica carinata HOM05D003193 ORTHO05D004924 1.5e-132 477.6 780 37.4
C02p37720 Brassica napus HOM05D003193 ORTHO05D004924 5.8e-132 475.7 795 37.0
Nitab4.5_0001498g0050 Nicotiana tabacum HOM05D003193 ORTHO05D004924 2.9e-131 473.4 747 39.1
A02p23930 Brassica napus HOM05D003193 ORTHO05D004924 3.8e-131 473.0 762 38.2
BraA02t07385Z Brassica rapa HOM05D003193 ORTHO05D004924 3.8e-131 473.0 762 38.2
BolC2t09791H Brassica oleracea HOM05D003193 ORTHO05D004924 4.9e-131 472.6 780 37.2
BcaC03g16020 Brassica carinata HOM05D003193 ORTHO05D004924 8.4e-131 471.9 765 38.2
HPP92_001295 Vanilla planifolia HOM05D003193 ORTHO05D004924 4.5e-124 449.5 713 38.1
Nitab4.5_0002063g0040 Nicotiana tabacum HOM05D003193 ORTHO05D004924 1.1e-109 401.7 638 38.7
CDE09G0882 Ceratophyllum demersum HOM05D003193 ORTHO05D004924 9.4e-106 388.7 724 35.2
ATR0787G183 Amborella trichopoda HOM05D003193 ORTHO05D004924 2.2e-102 377.5 643 37.6
SEGI_25764 Sequoiadendron giganteum HOM05D003193 ORTHO05D004924 3.8e-99 366.7 634 36.0
Actinidia06818 Actinidia chinensis HOM05D003193 ORTHO05D004924 1.6e-97 361.3 407 47.9
Zm00001eb055550 Zea mays HOM05D003193 ORTHO05D004924 2.2e-86 324.3 690 31.2
CiPaw.07G075300 Carya illinoinensis HOM05D003193 ORTHO05D004924 8.6e-83 312.4 423 41.8
Mapoly0135s0025 Marchantia polymorpha HOM05D003193 ORTHO05D004924 1.5e-74 285.0 500 33.8
Sc09g0001810 Simmondsia chinensis HOM05D003193 ORTHO05D004924 2.0e-71 274.6 472 37.5
Pp3c22_8910 Physcomitrium patens HOM05D003193 ORTHO05D004924 1.8e-69 268.1 717 28.3
CBR_g28040 Chara braunii HOM05D003193 ORTHO05D004924 2.1e-65 254.6 757 27.1
SMO356G0295 Selaginella moellendorffii HOM05D003193 ORTHO05D004924 1.1e-56 225.7 716 28.4
AagrBONN_evm.TU.Sc2ySwM_344.2455 Anthoceros agrestis HOM05D003193 ORTHO05D004924 1.8e-48 198.4 700 26.6
SHI15643 Sapria himalayana HOM05D003193 ORTHO05D004924 8.1e-33 146.4 305 34.1
CSS0034895 Camellia sinensis var. sinensis HOM05D003193 ORTHO05D016156 2.0e-31 141.7 126 54.0
MD04G1234000 Malus domestica HOM05D003193 ORTHO05D004924 1.4e-21 109.0 148 40.5
Os02g0538400 Oryza sativa ssp. japonica HOM05D003193 ORTHO05D004924 3.2e-21 107.8 504 25.6
MD04G1234200 Malus domestica HOM05D003193 ORTHO05D004924 2.3e-19 101.7 97 54.6
SHI15645 Sapria himalayana HOM05D003193 ORTHO05D004924 4.3e-18 97.4 110 46.4
MD08G1086100 Malus domestica HOM05D003193 ORTHO05D004924 4.9e-14 84.0 75 48.0
AL2G19220 Arabidopsis lyrata HOM05D003193 ORTHO05D004924 1.6e-09 68.9 176 30.1
VMungo1383G1292 Vigna mungo HOM05D003798 ORTHO05D004652 6.3e-09 67.0 70 45.7
Haze_04475 Corylus avellana HOM05D003193 ORTHO05D004924 9.0e-08 63.2 73 46.6
Ah.02g118790 Amaranthus hybridus HOM05D003193 ORTHO05D004924 7.7e-07 60.1 118 33.1
ATR0787G173 Amborella trichopoda HOM05D003193 ORTHO05D004924 5.0e-06 57.4 116 31.0
MD04G1234100 Malus domestica HOM05D003193 ORTHO05D004924 5.0e-06 57.4 113 36.3
RcHm_v2.0_Chr5g0043171 Rosa chinensis HOM05D003193 ORTHO05D004924 8.5e-06 56.6 57 47.4


User provided reference genes

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