Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 0.0e+00 1364.0 714 100.0
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 1.7e-222 776.5 630 66.8
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 1.2e-143 514.6 751 45.0
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 2.0e-138 497.3 734 43.7
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 5.8e-130 469.2 740 43.2
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 1.3e-129 468.0 732 42.9
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 6.6e-126 455.7 748 40.6
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 1.3e-121 441.4 752 40.6
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 1.5e-101 374.8 731 38.6
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 2.2e-97 360.9 722 38.8
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 8.5e-97 359.0 748 38.2
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 3.2e-96 357.1 753 36.7
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 2.1e-95 354.4 781 36.6
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 3.6e-95 353.6 710 37.9
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 1.8e-94 351.3 758 36.0
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 2.3e-94 350.9 806 35.2
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 3.0e-94 350.5 771 35.9
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 8.8e-94 349.0 759 36.0
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 3.3e-93 347.1 741 36.0
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 1.5e-90 338.2 759 36.9
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 5.0e-89 333.2 756 36.2
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 3.2e-88 330.5 746 35.9
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 4.2e-88 330.1 763 35.0
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 2.1e-87 327.8 744 35.5
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 2.1e-87 327.8 772 35.2
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 6.7e-86 322.8 745 34.9
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 2.8e-84 317.4 761 34.2
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 3.7e-84 317.0 765 36.1
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 4.8e-84 316.6 767 34.7
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 4.8e-84 316.6 749 34.6
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 1.1e-83 315.5 749 34.7
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 1.8e-83 314.7 758 35.1
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 1.8e-83 314.7 727 35.1
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 4.1e-83 313.5 761 35.1
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 1.6e-82 311.6 765 34.6
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 5.9e-82 309.7 769 35.1
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 1.3e-81 308.5 730 35.1
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 8.5e-81 305.8 758 36.1
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 7.2e-80 302.8 752 33.5
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 9.4e-80 302.4 732 34.0
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 8.0e-79 299.3 757 34.1
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 1.8e-78 298.1 755 33.8
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 2.3e-78 297.7 753 34.1
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 1.6e-74 285.0 891 30.6
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 2.7e-74 284.3 744 32.9
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 3.5e-74 283.9 826 33.5
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 1.3e-73 282.0 720 33.3
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 8.5e-73 279.3 762 33.9
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 8.5e-73 279.3 744 34.8
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 2.7e-71 274.2 766 32.9
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 6.1e-71 273.1 917 30.4
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 3.0e-70 270.8 746 32.8
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 3.0e-70 270.8 765 33.1
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 6.8e-70 269.6 765 31.9
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.2e-69 268.9 764 33.5
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 4.4e-69 266.9 764 33.5
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 7.5e-69 266.2 784 32.8
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 3.7e-68 263.8 746 33.2
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 1.1e-67 262.3 777 32.2
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 1.8e-67 261.5 782 32.9
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 7.0e-67 259.6 742 32.5
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 1.1e-64 252.3 743 32.0
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 3.2e-64 250.8 727 32.2
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 4.2e-64 250.4 700 31.9
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 1.6e-63 248.4 765 29.9
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 2.1e-63 248.1 745 32.9
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 3.6e-63 247.3 782 31.2
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.4e-62 245.4 792 33.2
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 4.0e-62 243.8 792 33.2
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 8.8e-62 242.7 755 31.9
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 4.5e-58 230.3 745 31.4
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 5.9e-58 229.9 774 32.6
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 2.9e-57 227.6 736 31.9
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 6.6e-57 226.5 729 31.8
MSTRG.13052 Avicennia marina HOM05D005664 ORTHO05D006509 1.0e-54 219.2 562 34.2
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 3.0e-54 217.6 773 31.0
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 6.8e-54 216.5 728 31.7
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 9.2e-51 206.1 782 31.6
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 1.2e-50 205.7 795 29.7
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 3.9e-49 200.7 782 31.2
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 8.6e-49 199.5 754 30.5
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 1.1e-48 199.1 748 31.0
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 3.3e-48 197.6 782 30.3
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 6.2e-47 193.4 763 27.8
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 1.0e-46 192.6 760 29.3
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 1.8e-46 191.8 775 30.1
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 6.8e-46 189.9 707 29.4
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 8.9e-46 189.5 770 27.5
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 1.2e-45 189.1 766 31.5
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 1.2e-45 189.1 748 28.9
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 1.2e-45 189.1 803 29.3
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 7.5e-45 186.4 784 30.0
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 8.3e-44 183.0 761 29.0
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 2.4e-43 181.4 769 29.6
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 3.5e-42 177.6 772 30.2
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 7.8e-42 176.4 729 28.3
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 1.7e-41 175.3 759 29.6
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 3.9e-41 174.1 763 30.0
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 1.5e-40 172.2 693 28.6
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 5.6e-40 170.2 812 29.2
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 1.6e-39 168.7 696 29.2
Migut.H01706 Erythranthe guttata HOM05D005664 ORTHO05D006509 2.3e-38 164.9 742 28.8
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 2.3e-38 164.9 703 28.7
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 4.0e-38 164.1 714 27.2
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 2.0e-37 161.8 797 29.2
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 3.4e-37 161.0 741 27.5
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 2.2e-36 158.3 722 27.6
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 8.3e-36 156.4 790 28.4
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 8.3e-36 156.4 790 28.4
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 1.4e-35 155.6 732 27.0
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 1.9e-35 155.2 766 28.6
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 2.4e-35 154.8 171 48.0
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 4.1e-35 154.1 264 40.5
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 7.1e-35 153.3 694 29.5
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 1.6e-34 152.1 768 28.4
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 4.6e-34 150.6 770 28.2
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 6.0e-34 150.2 800 29.0
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 1.3e-33 149.1 759 27.8
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 1.7e-33 148.7 704 29.3
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 5.6e-32 143.7 785 28.5
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 5.6e-32 143.7 785 28.5
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 5.6e-32 143.7 761 27.7
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 1.8e-30 138.7 710 28.2
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 1.2e-29 136.0 666 27.6
Ah.04g166380 Amaranthus hybridus HOM05D005664 ORTHO05D006509 1.1e-27 129.4 687 26.5
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 1.4e-27 129.0 729 25.9
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 7.3e-24 116.7 735 25.7
Lj1A901G38 Lonicera japonica HOM05D005664 ORTHO05D006509 7.3e-24 116.7 125 48.0
Zm00001eb422560 Zea mays HOM05D019841 ORTHO05D006509 1.3e-17 95.9 729 24.4
MSTRG.7045 Avicennia marina HOM05D005664 ORTHO05D006509 2.5e-16 91.7 96 51.0
Zm00001eb082760 Zea mays HOM05D019841 ORTHO05D006509 8.1e-15 86.7 830 24.7
ATR0021G035 Amborella trichopoda HOM05D005664 ORTHO05D006509 1.5e-13 82.4 821 24.2
Os04g0431000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D006509 6.4e-12 77.0 213 30.5
Os02g0550000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D037008 3.5e-10 71.2 207 28.0


User provided reference genes

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