Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12183 Utricularia gibba HOM05D004683 ORTHO05D005388 3.4e-110 401.7 214 100.0
Actinidia11898 Actinidia chinensis HOM05D004683 ORTHO05D005388 1.9e-52 209.9 219 58.4
Nn1g07478 Nelumbo nucifera HOM05D004683 ORTHO05D005388 7.2e-52 208.0 215 58.1
Actinidia39280 Actinidia chinensis HOM05D004683 ORTHO05D005388 1.2e-51 207.2 219 57.1
Dinv04407 Davidia involucrata HOM05D004683 ORTHO05D005388 6.1e-51 204.9 175 66.3
GSVIVG01007216001 Vitis vinifera HOM05D004683 ORTHO05D005388 8.0e-51 204.5 215 58.6
Oeu052851.1 Olea europaea HOM05D004683 ORTHO05D005388 8.8e-50 201.1 217 58.5
Solyc11g012610.2 Solanum lycopersicum HOM05D004683 ORTHO05D005388 1.2e-49 200.7 216 58.8
PGSC0003DMG400013358 Solanum tuberosum HOM05D004683 ORTHO05D005388 1.2e-49 200.7 216 58.3
CSS0016540 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.6e-49 199.5 219 56.2
MD10G1336700 Malus domestica HOM05D004683 ORTHO05D005388 4.4e-49 198.7 216 56.5
SGA_v2.0_scaffold7G03714 Striga asiatica HOM05D004683 ORTHO05D005388 4.4e-49 198.7 218 57.3
TAR626G1909 Trochodendron aralioides HOM05D004683 ORTHO05D005388 9.8e-49 197.6 217 54.4
Lj6g0001835 Lotus japonicus HOM05D004683 ORTHO05D005388 2.8e-48 196.1 219 55.7
Atru.chr1.2335 Acer truncatum HOM05D004683 ORTHO05D005388 3.7e-48 195.7 219 54.8
Sed0018998 Sechium edule HOM05D004683 ORTHO05D005388 3.7e-48 195.7 214 55.6
CAN.G696.10 Capsicum annuum HOM05D004683 ORTHO05D005388 4.9e-48 195.3 220 56.4
MD00G1058000 Malus domestica HOM05D004683 ORTHO05D005388 1.4e-47 193.7 216 55.6
PGSC0003DMG400023555 Solanum tuberosum HOM05D004683 ORTHO05D005388 1.8e-47 193.4 224 56.7
Manes.09G081701 Manihot esculenta HOM05D004683 ORTHO05D005388 2.4e-47 193.0 217 56.2
Nitab4.5_0001668g0040 Nicotiana tabacum HOM05D004683 ORTHO05D005388 7.0e-47 191.4 216 59.3
Peaxi162Scf00352g01036 Petunia axillaris HOM05D004683 ORTHO05D005388 9.2e-47 191.0 220 56.8
Prupe.4G006700 Prunus persica HOM05D004683 ORTHO05D005388 1.2e-46 190.7 217 54.8
CSS0018655 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.6e-46 190.3 222 54.1
RcHm_v2.0_Chr5g0000761 Rosa chinensis HOM05D004683 ORTHO05D005388 5.9e-46 188.3 218 54.1
MBI19_g44082_MAGBIO Magnolia biondii HOM05D004683 ORTHO05D005388 7.7e-46 188.0 216 53.7
THA.LOC104806735 Tarenaya hassleriana HOM05D004683 ORTHO05D005388 7.7e-46 188.0 215 53.0
Duzib160G0680 Durio zibethinus HOM05D004683 ORTHO05D005388 1.0e-45 187.6 214 53.7
FAN25G2373 Fragaria x ananassa HOM05D004683 ORTHO05D005388 1.3e-45 187.2 218 53.2
Cfa000066 Carpinus fangiana HOM05D004683 ORTHO05D005388 1.7e-45 186.8 184 60.9
ClCG01G010700 Citrullus lanatus HOM05D004683 ORTHO05D005388 2.3e-45 186.4 214 54.2
PSO541G4951 Papaver somniferum HOM05D004683 ORTHO05D005388 3.8e-45 185.7 225 52.0
Aqoxy4G02236 Aquilegia oxysepala HOM05D004683 ORTHO05D005388 5.0e-45 185.3 214 53.3
CsaV3_UNG061480 Cucumis sativus L. HOM05D004683 ORTHO05D005388 8.6e-45 184.5 209 54.5
PSO675G6369 Papaver somniferum HOM05D004683 ORTHO05D005388 8.6e-45 184.5 225 51.6
Migut.M01430 Erythranthe guttata HOM05D004683 ORTHO05D005388 1.1e-44 184.1 220 55.9
Oeu052866.1 Olea europaea HOM05D004683 ORTHO05D005388 1.9e-44 183.3 238 52.9
PGR004G0928 Punica granatum HOM05D004683 ORTHO05D005388 2.5e-44 183.0 221 51.1
Lalb_Chr15g0088101 Lupinus albus HOM05D004683 ORTHO05D005388 3.3e-44 182.6 218 53.7
DCAR_030854 Daucus carota HOM05D004683 ORTHO05D005388 4.3e-44 182.2 218 54.1
CDE04G2289 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 5.6e-44 181.8 174 58.0
Potri.016G008400 Populus trichocarpa HOM05D004683 ORTHO05D005388 5.6e-44 181.8 166 63.9
Potri.006G017200 Populus trichocarpa HOM05D004683 ORTHO05D005388 7.3e-44 181.4 219 53.4
FvH4_3g00551 Fragaria vesca HOM05D004683 ORTHO05D005388 9.5e-44 181.0 218 52.8
CsaV3_1G015800 Cucumis sativus L. HOM05D004683 ORTHO05D005388 1.2e-43 180.6 206 54.4
Lsat_1_v5_gn_7_14120 Lactuca sativa HOM05D004683 ORTHO05D005388 1.2e-43 180.6 210 52.9
SalBow8G0627 Salvia bowleyana HOM05D004683 ORTHO05D005388 2.8e-43 179.5 182 59.9
MELO3C025532.2 Cucumis melo HOM05D004683 ORTHO05D005388 3.6e-43 179.1 224 51.3
Peaxi162Scf01544g00025 Petunia axillaris HOM05D004683 ORTHO05D005388 3.6e-43 179.1 222 54.1
Sabra06G0012200 Salix brachista HOM05D004683 ORTHO05D005388 4.7e-43 178.7 211 54.5
Cc09_g00590 Coffea canephora HOM05D004683 ORTHO05D005388 6.1e-43 178.3 221 52.5
Phvul.006G141000 Phaseolus vulgaris HOM05D004683 ORTHO05D005388 8.0e-43 177.9 218 50.9
Aa31LG6G60 Aethionema arabicum HOM05D004683 ORTHO05D005388 2.3e-42 176.4 226 50.9
Lsat_1_v5_gn_0_24381 Lactuca sativa HOM05D004683 ORTHO05D005388 6.8e-42 174.9 172 58.1
Glyma.15G117000 Glycine max HOM05D004683 ORTHO05D005388 8.9e-42 174.5 209 51.7
Medtr2g026550 Medicago truncatula HOM05D004683 ORTHO05D005388 8.9e-42 174.5 208 51.9
Eucgr.D01443 Eucalyptus grandis HOM05D004683 ORTHO05D005388 1.2e-41 174.1 220 50.0
COL.COLO4_15259 Corchorus olitorius HOM05D004683 ORTHO05D005388 1.5e-41 173.7 216 53.7
Sc05g0009730 Simmondsia chinensis HOM05D004683 ORTHO05D005388 1.5e-41 173.7 175 59.4
Duzib235G0361 Durio zibethinus HOM05D004683 ORTHO05D005388 2.6e-41 172.9 218 51.8
Glyma.09G012400 Glycine max HOM05D004683 ORTHO05D005388 5.7e-41 171.8 209 51.7
Gohir.D10G008100 Gossypium hirsutum HOM05D004683 ORTHO05D005388 2.9e-40 169.5 175 58.9
HanXRQChr15g0470281 Helianthus annuus HOM05D004683 ORTHO05D005388 3.7e-40 169.1 212 51.9
Lj2A259T33 Lonicera japonica HOM05D004683 ORTHO05D005388 3.7e-40 169.1 218 53.2
arahy.Tifrunner.gnm1.ann1.5M71YA Arachis hypogaea HOM05D004683 ORTHO05D005388 4.9e-40 168.7 224 48.2
arahy.Tifrunner.gnm1.ann1.L4TARN Arachis hypogaea HOM05D004683 ORTHO05D005388 4.9e-40 168.7 224 48.2
Gohir.A10G008300 Gossypium hirsutum HOM05D004683 ORTHO05D005388 1.4e-39 167.2 169 58.6
CiPaw.09G105900 Carya illinoinensis HOM05D004683 ORTHO05D005388 3.2e-39 166.0 214 50.5
Nitab4.5_0004646g0030 Nicotiana tabacum HOM05D004683 ORTHO05D005388 3.2e-39 166.0 224 49.6
CSS0042800 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.4e-39 165.2 155 63.9
Gorai.010G188900 Gossypium raimondii HOM05D004683 ORTHO05D005388 9.2e-39 164.5 175 57.7
Gorai.011G008800 Gossypium raimondii HOM05D004683 ORTHO05D005388 1.2e-38 164.1 175 56.6
CANSAT56G4109 Cannabis sativa HOM05D004683 ORTHO05D005388 1.6e-38 163.7 217 47.9
Oeu030103.1 Olea europaea HOM05D004683 ORTHO05D005388 3.5e-38 162.5 220 50.5
Sabra16G0012800 Salix brachista HOM05D004683 ORTHO05D005388 3.5e-38 162.5 241 48.5
Gohir.D06G161900 Gossypium hirsutum HOM05D004683 ORTHO05D005388 4.6e-38 162.2 175 57.1
Hma1.2p1_0657F.1_g196900 Hydrangea macrophylla HOM05D004683 ORTHO05D005388 1.3e-37 160.6 217 50.2
Gohir.A06G155500 Gossypium hirsutum HOM05D004683 ORTHO05D005388 1.7e-37 160.2 175 56.6
ATR0624G003 Amborella trichopoda HOM05D004683 ORTHO05D005388 5.0e-37 158.7 173 53.8
HPP92_014031 Vanilla planifolia HOM05D004683 ORTHO05D005388 5.0e-37 158.7 216 44.4
MSTRG.7144 Avicennia marina HOM05D004683 ORTHO05D005388 1.1e-36 157.5 133 66.2
VMungo0540G0168 Vigna mungo HOM05D004683 ORTHO05D005388 1.1e-36 157.5 196 49.5
Thhalv10025641m.g Eutrema salsugineum HOM05D004683 ORTHO05D005388 1.9e-36 156.8 222 48.6
AL7G37470 Arabidopsis lyrata HOM05D004683 ORTHO05D005388 7.3e-36 154.8 222 47.7
CDE06G0298 Ceratophyllum demersum HOM05D000165 ORTHO05D005388 1.6e-35 153.7 138 61.6
Sp7g16950 Schrenkiella parvula HOM05D004683 ORTHO05D005388 1.6e-35 153.7 223 47.1
Hund21139 Selenicereus undatus HOM05D004683 ORTHO05D005388 1.6e-35 153.7 228 44.7
AT4G17240 Arabidopsis thaliana HOM05D004683 ORTHO05D005388 2.1e-35 153.3 222 48.2
AUR62021828 Chenopodium quinoa HOM05D004683 ORTHO05D005388 2.8e-35 152.9 175 53.1
Carub.0007s2417 Capsella rubella HOM05D004683 ORTHO05D005388 8.0e-35 151.4 222 47.3
Sopen04g006980 Solanum pennellii HOM05D004683 ORTHO05D005388 1.8e-34 150.2 225 48.4
CARHR223850 Cardamine hirsuta HOM05D004683 ORTHO05D005388 4.0e-34 149.1 218 48.6
Solyc04g014850.3 Solanum lycopersicum HOM05D004683 ORTHO05D005388 6.8e-34 148.3 225 47.6
A01p20140 Brassica napus HOM05D004683 ORTHO05D005388 3.4e-33 146.0 213 48.8
BcaC09g50454 Brassica carinata HOM05D004683 ORTHO05D005388 4.4e-33 145.6 222 45.9
C01p25270 Brassica napus HOM05D004683 ORTHO05D005388 4.4e-33 145.6 222 45.9
BolC1t02477H Brassica oleracea HOM05D004683 ORTHO05D005388 4.4e-33 145.6 222 45.9
QL05p068304 Quercus lobata HOM05D004683 ORTHO05D005388 4.4e-33 145.6 223 46.6
HPP92_028363 Vanilla planifolia HOM05D004683 ORTHO05D005388 4.4e-33 145.6 239 40.2
AUR62012829 Chenopodium quinoa HOM05D004683 ORTHO05D005388 5.8e-33 145.2 175 51.4
Haze_06980 Corylus avellana HOM05D004683 ORTHO05D005388 5.8e-33 145.2 183 52.5
BraA01t01938Z Brassica rapa HOM05D004683 ORTHO05D005388 9.8e-33 144.4 213 46.5
Thecc.06G237400 Theobroma cacao HOM05D004683 ORTHO05D005388 1.7e-32 143.7 214 44.9
TWI38G0781 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 2.9e-32 142.9 214 45.3
Ca_00746_v3 Cicer arietinum L. HOM05D004683 ORTHO05D005388 3.7e-32 142.5 175 50.9
Ah.14g087460 Amaranthus hybridus HOM05D004683 ORTHO05D005388 6.4e-32 141.7 179 49.7
CAN.G1263.24 Capsicum annuum HOM05D004683 ORTHO05D005388 1.4e-31 140.6 209 45.9
TPR.G10575 Trifolium pratense HOM05D004683 ORTHO05D005388 3.2e-31 139.4 208 43.8
Sabra16G0012500 Salix brachista HOM05D004683 ORTHO05D005388 9.2e-31 137.9 107 70.1
Rhsim02G0091200 Rhododendron simsii HOM05D004683 ORTHO05D005388 1.2e-30 137.5 215 46.0
Psat1g173720 Pisum sativum HOM05D004683 ORTHO05D005388 1.6e-30 137.1 210 44.8
EL10Ac8g20240 Beta vulgaris HOM05D004683 ORTHO05D005388 1.7e-29 133.7 175 48.6
Cpa.g.sc27.252 Carica papaya HOM05D004683 ORTHO05D005388 1.7e-29 133.7 136 61.8
ECA246G4668 Erigeron canadensis HOM05D004683 ORTHO05D005388 5.0e-29 132.1 173 48.6
SEGI_35929 Sequoiadendron giganteum HOM05D004683 ORTHO05D005388 2.8e-27 126.3 182 46.2
PSO339G0967 Papaver somniferum HOM05D004683 ORTHO05D005388 3.6e-27 125.9 105 63.8
TAR341G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 1.4e-26 124.0 106 68.9
TAR485G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 1.4e-26 124.0 106 68.9
vmacro15736 Vaccinium macrocarpon HOM05D004683 ORTHO05D005388 1.8e-26 123.6 217 45.2
QL05p068796 Quercus lobata HOM05D004683 ORTHO05D005388 8.9e-26 121.3 215 42.8
TWI63G0041 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 4.4e-25 119.0 166 47.6
Ah.09g234040 Amaranthus hybridus HOM05D004683 ORTHO05D005388 9.8e-25 117.9 168 45.8
Sopen11g007340 Solanum pennellii HOM05D004683 ORTHO05D005388 1.7e-24 117.1 155 51.6
Zm00001eb214850 Zea mays HOM05D004683 ORTHO05D005388 8.3e-24 114.8 169 43.8
MSTRG.16041 Avicennia marina HOM05D004683 ORTHO05D005388 2.1e-22 110.2 115 57.4
MSTRG.14824 Avicennia marina HOM05D004683 ORTHO05D005388 6.0e-22 108.6 115 57.4
Zm00001eb057420 Zea mays HOM05D004683 ORTHO05D005388 2.3e-21 106.7 195 39.0
Ciclev10017876m.g Citrus clementina HOM05D004683 ORTHO05D005388 6.2e-19 98.6 166 45.2
Nitab4.5_0001109g0120 Nicotiana tabacum HOM05D004683 ORTHO05D005388 2.3e-18 96.7 220 37.7
BcaNung00108 Brassica carinata HOM05D004683 ORTHO05D005388 3.1e-18 96.3 87 65.5
CDE04G1899 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 2.4e-15 86.7 164 41.5
Os03g0750900 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 5.4e-15 85.5 106 47.2
CDE07G1645 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 1.9e-12 77.0 100 48.0
SMO351G0434 Selaginella moellendorffii HOM05D025386 ORTHO05D005388 2.4e-10 70.1 127 39.4
Sabra19G0093600 Salix brachista HOM05D000057 ORTHO05D005388 6.4e-08 62.0 58 62.1
CSS0011389 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 8.4e-08 61.6 113 38.9
A09p40660 Brassica napus HOM05D004683 ORTHO05D005388 1.4e-07 60.8 44 77.3


User provided reference genes

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