Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 6.0e-163 577.4 282 100.0
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 4.0e-127 458.4 283 75.6
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 1.3e-125 453.4 287 73.9
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 2.9e-125 452.2 283 73.5
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 3.8e-125 451.8 283 73.5
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 8.4e-125 450.7 287 73.5
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 4.2e-124 448.4 283 73.5
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 6.1e-123 444.5 283 72.1
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.3e-122 442.6 283 71.7
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 2.5e-121 439.1 290 70.7
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 5.7e-121 438.0 307 69.1
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 7.4e-121 437.6 272 74.3
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 7.4e-121 437.6 288 71.5
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 9.7e-121 437.2 283 70.7
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 2.8e-120 435.6 287 70.7
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 4.8e-120 434.9 287 70.4
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 1.1e-119 433.7 287 69.7
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 1.4e-119 433.3 283 71.4
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 1.8e-119 433.0 283 69.6
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 5.3e-119 431.4 283 69.3
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 5.3e-119 431.4 287 71.1
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 5.3e-119 431.4 287 71.1
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 5.3e-119 431.4 288 70.1
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 1.5e-118 429.9 287 70.0
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 2.0e-118 429.5 282 68.8
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 3.4e-118 428.7 287 71.1
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 4.5e-118 428.3 277 72.2
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 7.7e-118 427.6 301 67.1
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 1.3e-117 426.8 281 70.1
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 1.3e-117 426.8 287 68.6
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 1.7e-117 426.4 283 68.6
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.2e-117 426.0 287 70.7
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 5.0e-117 424.9 283 67.8
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 1.1e-116 423.7 287 68.6
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 1.9e-116 422.9 283 66.4
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 1.9e-116 422.9 283 67.5
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 4.2e-116 421.8 287 68.6
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 7.2e-116 421.0 283 68.6
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 9.4e-116 420.6 283 67.1
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 3.6e-115 418.7 280 68.6
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 1.4e-114 416.8 280 67.9
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 1.8e-114 416.4 280 67.5
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 1.8e-114 416.4 287 67.9
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 2.3e-114 416.0 271 69.7
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 3.0e-114 415.6 280 68.2
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 3.9e-114 415.2 280 67.9
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 6.7e-114 414.5 280 67.1
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 6.7e-114 414.5 280 67.9
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 6.7e-114 414.5 280 66.8
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 6.7e-114 414.5 287 67.2
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 8.8e-114 414.1 280 67.9
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 1.5e-113 413.3 287 65.2
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 4.3e-113 411.8 280 67.1
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 4.3e-113 411.8 280 69.3
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 4.3e-113 411.8 286 65.7
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 4.3e-113 411.8 280 66.1
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 4.3e-113 411.8 281 67.3
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 5.7e-113 411.4 280 66.4
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 5.7e-113 411.4 281 67.3
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 7.4e-113 411.0 280 66.8
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 1.7e-112 409.8 285 66.7
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 1.7e-112 409.8 285 67.0
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 2.2e-112 409.5 290 65.9
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 2.2e-112 409.5 281 67.6
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 2.8e-112 409.1 281 65.8
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 4.8e-112 408.3 280 66.8
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 4.8e-112 408.3 286 65.0
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 1.1e-111 407.1 277 67.5
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 1.1e-111 407.1 280 66.1
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 1.8e-111 406.4 281 65.5
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 2.4e-111 406.0 284 64.8
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 3.1e-111 405.6 283 64.3
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 3.1e-111 405.6 283 64.0
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 6.9e-111 404.4 284 63.4
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 9.1e-111 404.1 281 65.5
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 3.4e-110 402.1 284 66.2
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 3.4e-110 402.1 284 66.2
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 1.0e-109 400.6 281 65.1
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 2.9e-109 399.1 280 66.1
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 3.8e-109 398.7 286 65.4
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 3.6e-107 392.1 269 65.4
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 6.1e-107 391.3 323 57.6
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 1.8e-106 389.8 269 65.1
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 3.0e-106 389.0 279 62.4
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 3.9e-106 388.7 284 62.3
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 8.8e-106 387.5 269 65.1
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 8.8e-106 387.5 269 65.1
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 8.2e-104 380.9 261 67.4
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 2.6e-102 375.9 267 62.9
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 2.5e-100 369.4 284 59.2
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 1.2e-99 367.1 245 69.4
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 8.8e-98 360.9 261 65.1
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 1.7e-96 356.7 279 58.4
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 2.8e-96 355.9 279 61.3
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 1.8e-95 353.2 244 64.8
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 6.5e-93 344.7 279 57.0
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 4.2e-92 342.0 239 69.0
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 4.7e-83 312.0 209 70.3
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 4.4e-81 305.4 260 54.2
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 6.1e-75 285.0 185 68.1
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 1.2e-73 280.8 261 49.0
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 7.8e-70 268.1 262 49.2
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 3.4e-65 252.7 264 46.2
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 2.9e-64 249.6 258 46.5
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 6.4e-48 195.3 250 40.0
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 8.4e-48 194.9 149 59.7
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 9.3e-39 164.9 105 67.6
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 6.0e-38 162.2 298 38.6
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 3.3e-36 156.4 107 70.1
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 9.6e-36 154.8 166 50.6
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.6e-35 154.1 194 41.8
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 1.3e-29 134.4 100 58.0
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.1e-28 131.3 93 62.4
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 6.9e-26 122.1 86 67.4
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 4.6e-22 109.4 69 75.4
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 7.9e-22 108.6 70 70.0
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 1.3e-21 107.8 72 70.8
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 2.1e-11 73.9 41 70.7


User provided reference genes

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