Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 1.0e-288 996.1 521 100.0
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 5.1e-176 621.7 520 66.2
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 6.3e-166 588.2 520 61.9
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 2.6e-164 582.8 509 63.1
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 2.2e-163 579.7 537 60.1
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 3.8e-163 578.9 521 61.2
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 7.2e-162 574.7 567 57.7
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 9.4e-162 574.3 496 62.1
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 1.6e-161 573.5 510 61.4
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 2.1e-161 573.2 496 61.9
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 2.7e-161 572.8 496 62.1
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 6.1e-161 571.6 496 61.7
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 1.0e-160 570.9 498 61.8
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 1.1e-159 567.4 517 59.6
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 2.0e-159 566.6 519 59.7
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 2.5e-159 566.2 495 59.2
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 7.4e-159 564.7 519 59.0
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 3.7e-158 562.4 510 60.8
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 3.7e-158 562.4 510 60.8
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 4.8e-158 562.0 532 58.1
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 6.3e-158 561.6 549 57.4
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 1.4e-157 560.5 508 59.3
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 5.3e-157 558.5 519 58.4
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 5.3e-157 558.5 531 57.6
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 2.6e-156 556.2 491 61.1
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 4.5e-156 555.4 515 58.8
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 1.0e-155 554.3 523 57.0
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 1.7e-155 553.5 510 58.8
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 2.2e-155 553.1 501 59.7
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 2.9e-155 552.7 522 57.1
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 5.5e-154 548.5 502 60.6
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 1.2e-153 547.4 499 60.1
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 4.7e-153 545.4 514 57.0
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 6.1e-153 545.0 523 57.0
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 1.0e-152 544.3 525 57.3
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 5.1e-152 542.0 519 56.5
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 1.1e-151 540.8 507 57.4
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 1.1e-151 540.8 516 56.8
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 2.0e-151 540.0 498 58.8
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 2.6e-151 539.7 507 57.0
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 9.7e-151 537.7 528 55.9
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 9.7e-151 537.7 517 56.5
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 1.3e-150 537.3 524 56.1
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 1.7e-150 537.0 524 56.3
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 3.7e-150 535.8 517 56.5
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 3.7e-150 535.8 508 56.1
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 8.2e-150 534.6 518 56.4
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 4.1e-149 532.3 498 56.2
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 7.0e-149 531.6 514 57.4
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 3.5e-148 529.3 497 58.6
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 3.5e-148 529.3 509 57.4
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 1.0e-147 527.7 526 56.1
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 6.5e-147 525.0 513 56.3
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 1.1e-146 524.2 516 56.2
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 5.5e-146 521.9 511 54.6
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 5.5e-146 521.9 524 55.9
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 8.0e-145 518.1 515 56.3
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 3.0e-144 516.2 545 53.0
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 1.5e-143 513.8 510 55.3
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 7.4e-143 511.5 520 54.6
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 7.4e-143 511.5 486 56.4
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 6.3e-142 508.4 558 50.4
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 2.4e-141 506.5 577 51.5
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 4.1e-141 505.8 543 53.2
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 7.0e-141 505.0 484 56.0
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 9.1e-141 504.6 497 56.3
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 1.2e-140 504.2 411 63.0
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 1.2e-140 504.2 526 54.0
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 1.2e-140 504.2 495 57.6
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 4.5e-140 502.3 487 56.1
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 2.9e-139 499.6 511 53.8
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 5.0e-139 498.8 494 56.3
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 9.4e-138 494.6 520 53.5
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 3.6e-137 492.7 397 64.0
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 4.7e-137 492.3 513 53.0
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 5.2e-136 488.8 436 60.6
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 1.8e-133 480.3 487 53.8
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 4.1e-133 479.2 499 51.9
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 7.7e-132 474.9 541 53.2
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 3.8e-131 472.6 455 57.1
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 8.0e-129 464.9 535 54.8
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 1.8e-128 463.8 599 47.6
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 2.6e-127 459.9 502 52.4
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 2.4e-125 453.4 533 51.0
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 3.1e-125 453.0 541 49.7
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 9.1e-125 451.4 522 48.5
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 1.3e-118 431.0 488 51.0
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 5.4e-117 425.6 565 47.1
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 2.2e-110 403.7 345 58.8
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 4.6e-108 396.0 539 41.9
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 3.6e-105 386.3 489 45.6
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 1.6e-97 360.9 501 41.1
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 1.4e-96 357.8 316 60.1
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 3.1e-96 356.7 484 43.2
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 4.3e-90 336.3 317 57.1
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 3.6e-73 280.0 507 37.3
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 3.4e-55 220.3 220 55.5
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 1.9e-53 214.5 230 55.2
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 5.5e-53 213.0 197 55.8
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 5.5e-53 213.0 203 50.7
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 3.3e-50 203.8 238 50.0
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 2.2e-46 191.0 210 48.1
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 2.1e-44 184.5 227 46.7
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 1.8e-43 181.4 209 50.7
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 6.3e-41 172.9 541 28.7
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 4.4e-34 150.2 172 49.4
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 5.2e-27 126.7 196 43.9
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 1.2e-15 89.0 140 43.6
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 1.3e-14 85.5 58 79.3
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 3.0e-11 74.3 98 45.9
BcaC09g50327 Brassica carinata HOM05D017681 ORTHO05D019883 4.1e-08 63.9 117 34.2
BcaC04g20679 Brassica carinata HOM05D017681 ORTHO05D019883 9.2e-08 62.8 117 33.3
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 4.5e-07 60.5 69 55.1


User provided reference genes

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