Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 8.4e-73 276.9 141 100.0
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 9.6e-37 157.1 144 60.4
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 1.0e-22 110.5 135 50.4
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 4.4e-21 105.1 124 49.2
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 1.3e-20 103.6 126 53.2
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 2.0e-18 96.3 132 47.7
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 1.1e-16 90.5 131 41.2
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 1.1e-16 90.5 122 45.9
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.6e-15 86.7 125 46.4
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 3.6e-15 85.5 127 48.8
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 4.7e-15 85.1 117 47.0
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 4.7e-15 85.1 142 41.5
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 6.1e-15 84.7 111 46.8
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.0e-14 84.0 118 45.8
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 1.4e-14 83.6 111 46.8
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 3.0e-14 82.4 111 46.8
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 1.1e-13 80.5 119 42.9
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 2.0e-13 79.7 130 38.5
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 2.0e-13 79.7 147 38.1
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 2.6e-13 79.3 143 39.2
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 3.3e-13 79.0 130 40.0
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 3.3e-13 79.0 109 43.1
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 2.8e-12 75.9 139 38.8
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 3.7e-12 75.5 121 42.1
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 4.8e-12 75.1 134 41.0
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 1.1e-11 73.9 112 42.0
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 1.4e-11 73.6 109 40.4
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 2.4e-11 72.8 129 38.0
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.1e-11 72.4 115 38.3
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 4.1e-11 72.0 127 41.7
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 5.3e-11 71.6 115 39.1
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 7.0e-11 71.2 133 38.3
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 7.0e-11 71.2 128 39.8
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 7.0e-11 71.2 133 38.3
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 7.0e-11 71.2 133 38.3
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 1.2e-10 70.5 133 36.1
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 1.6e-10 70.1 144 40.3
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 2.6e-10 69.3 112 39.3
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 3.5e-10 68.9 128 39.1
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 4.5e-10 68.6 108 38.9
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 5.9e-10 68.2 152 36.2
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 7.7e-10 67.8 114 41.2
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 1.0e-09 67.4 116 38.8
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 1.0e-09 67.4 136 39.0
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.7e-09 66.6 125 38.4
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 2.2e-09 66.2 107 37.4
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.2e-09 66.2 107 40.2
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 2.9e-09 65.9 145 35.9
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 2.9e-09 65.9 129 34.9
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 3.8e-09 65.5 130 36.2
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 5.0e-09 65.1 139 34.5
PGSC0003DMG400021122 Solanum tuberosum HOM05D005932 ORTHO05D006213 5.0e-09 65.1 146 34.9
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 5.0e-09 65.1 139 35.3
Thhalv10026499m.g Eutrema salsugineum HOM05D005932 ORTHO05D006213 6.5e-09 64.7 119 35.3
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 6.5e-09 64.7 104 37.5
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 6.5e-09 64.7 117 35.9
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 8.5e-09 64.3 123 34.1
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.1e-08 63.9 117 39.3
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.1e-08 63.9 123 38.2
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.1e-08 63.9 110 40.0
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.5e-08 63.5 126 35.7
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 1.5e-08 63.5 119 35.3
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.5e-08 63.5 131 35.1
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.5e-08 63.5 111 39.6
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.5e-08 63.5 136 34.6
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 2.5e-08 62.8 120 36.7
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 2.5e-08 62.8 114 42.1
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 3.2e-08 62.4 109 42.2
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 3.2e-08 62.4 119 34.5
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 4.2e-08 62.0 108 41.7
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 4.2e-08 62.0 145 33.8
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 5.5e-08 61.6 140 34.3
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 5.5e-08 61.6 128 32.8
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 5.5e-08 61.6 102 38.2
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 7.2e-08 61.2 110 37.3
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 7.2e-08 61.2 110 37.3
A01p13050 Brassica napus HOM05D005932 ORTHO05D006213 7.2e-08 61.2 114 34.2
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 7.2e-08 61.2 110 37.3
BraA01t01247Z Brassica rapa HOM05D005932 ORTHO05D006213 7.2e-08 61.2 114 34.2
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 7.2e-08 61.2 116 37.9
arahy.Tifrunner.gnm1.ann1.2W5S4G Arachis hypogaea HOM05D005932 ORTHO05D006213 9.4e-08 60.8 142 33.8
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.2e-07 60.5 126 35.7
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 1.6e-07 60.1 126 38.1
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 1.6e-07 60.1 125 37.6
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.7e-07 59.3 106 39.6
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 2.7e-07 59.3 120 34.2
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 4.7e-07 58.5 112 35.7
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 8.0e-07 57.8 118 34.7
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 1.0e-06 57.4 124 30.6
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.0e-06 57.4 99 40.4
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 1.8e-06 56.6 97 42.3
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 1.8e-06 56.6 132 33.3
Aa31LG6G3710 Aethionema arabicum HOM05D005932 ORTHO05D006213 2.3e-06 56.2 131 30.5
BcaB07g32663 Brassica carinata HOM05D012212 ORTHO05D006213 2.3e-06 56.2 133 35.3
A09p35930 Brassica napus HOM05D012212 ORTHO05D006213 3.0e-06 55.8 130 35.4
Carub.0007s1967 Capsella rubella HOM05D005932 ORTHO05D006213 3.0e-06 55.8 118 33.9
Thhalv10009012m.g Eutrema salsugineum HOM05D012212 ORTHO05D006213 3.0e-06 55.8 113 40.7
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 3.0e-06 55.8 109 33.9
QL05p061901 Quercus lobata HOM05D005932 ORTHO05D006213 3.0e-06 55.8 118 31.4
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 4.0e-06 55.5 138 32.6
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 4.0e-06 55.5 104 38.5
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 5.2e-06 55.1 112 37.5
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 6.7e-06 54.7 92 44.6
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 6.7e-06 54.7 141 33.3
BraA09t39118Z Brassica rapa HOM05D012212 ORTHO05D006213 8.8e-06 54.3 134 34.3
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 8.8e-06 54.3 113 38.1
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 8.8e-06 54.3 104 35.6
THA.LOC104798624 Tarenaya hassleriana HOM05D012212 ORTHO05D006213 8.8e-06 54.3 126 32.5


User provided reference genes

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