Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g11996 Utricularia gibba HOM05D004917 ORTHO05D005954 5.1e-148 527.7 262 100.0
vmacro18012 Vaccinium macrocarpon HOM05D004917 ORTHO05D005954 4.4e-59 232.3 153 69.9
SalBow5G1886 Salvia bowleyana HOM05D004917 ORTHO05D005954 9.8e-59 231.1 158 69.6
Rhsim08G0090300 Rhododendron simsii HOM05D004917 ORTHO05D005954 1.7e-58 230.3 173 65.9
Duzib147G0189 Durio zibethinus HOM05D004917 ORTHO05D005954 3.7e-58 229.2 195 60.5
SGA_v2.0_scaffold79G25603 Striga asiatica HOM05D004917 ORTHO05D005954 6.3e-58 228.4 197 59.4
Migut.L00432 Erythranthe guttata HOM05D004917 ORTHO05D005954 2.4e-57 226.5 146 71.2
Eucgr.H02332 Eucalyptus grandis HOM05D004917 ORTHO05D005954 4.1e-57 225.7 200 55.5
FvH4_1g18250 Fragaria vesca HOM05D004917 ORTHO05D005954 1.2e-56 224.2 187 62.0
FAN19G2004 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.2e-56 224.2 187 62.0
QL06p038930 Quercus lobata HOM05D004917 ORTHO05D005954 2.0e-56 223.4 168 64.9
RcHm_v2.0_Chr2g0108761 Rosa chinensis HOM05D004917 ORTHO05D005954 2.0e-56 223.4 187 61.0
Gohir.A10G089200 Gossypium hirsutum HOM05D004917 ORTHO05D005954 5.9e-56 221.9 178 62.4
CANSAT01G2436 Cannabis sativa HOM05D004917 ORTHO05D005954 7.7e-56 221.5 137 74.5
PSO017G2968 Papaver somniferum HOM05D004917 ORTHO05D005954 7.7e-56 221.5 196 56.6
Gohir.D10G098900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.0e-55 221.1 178 61.8
Actinidia16409 Actinidia chinensis HOM05D004917 ORTHO05D005954 1.3e-55 220.7 204 58.3
Gorai.011G108500 Gossypium raimondii HOM05D004917 ORTHO05D005954 2.3e-55 219.9 178 61.8
Manes.13G109000 Manihot esculenta HOM05D004917 ORTHO05D005954 2.3e-55 219.9 203 57.1
COL.COLO4_11616 Corchorus olitorius HOM05D004917 ORTHO05D005954 3.8e-55 219.2 148 69.6
Prupe.6G216800 Prunus persica HOM05D004917 ORTHO05D005954 3.8e-55 219.2 208 55.8
GSVIVG01004399001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.8e-55 219.2 194 58.2
Eucgr.H02333 Eucalyptus grandis HOM05D004917 ORTHO05D005954 5.0e-55 218.8 196 59.2
Sabra14G0006700 Salix brachista HOM05D004917 ORTHO05D005954 6.6e-55 218.4 140 71.4
AL8G43550 Arabidopsis lyrata HOM05D004917 ORTHO05D005954 2.5e-54 216.5 207 55.6
BraA09t36573Z Brassica rapa HOM05D004917 ORTHO05D005954 3.3e-54 216.1 197 55.8
Potri.014G012100 Populus trichocarpa HOM05D004917 ORTHO05D005954 3.3e-54 216.1 196 57.1
RcHm_v2.0_Chr2g0108751 Rosa chinensis HOM05D004917 ORTHO05D005954 3.3e-54 216.1 153 69.3
A09p09210 Brassica napus HOM05D004917 ORTHO05D005954 4.2e-54 215.7 197 55.8
FAN23G1748 Fragaria x ananassa HOM05D004917 ORTHO05D005954 5.5e-54 215.3 202 56.4
GSVIVG01007444001 Vitis vinifera HOM05D004917 ORTHO05D005954 5.5e-54 215.3 167 62.9
Cc07_g07360 Coffea canephora HOM05D004917 ORTHO05D005954 7.2e-54 214.9 186 56.5
Migut.L00430 Erythranthe guttata HOM05D004917 ORTHO05D005954 7.2e-54 214.9 146 71.2
TAR628G1580 Trochodendron aralioides HOM05D004917 ORTHO05D005954 9.5e-54 214.5 187 58.3
BcaB04g20033 Brassica carinata HOM05D004917 ORTHO05D005954 1.6e-53 213.8 198 55.1
BcaB04g20036 Brassica carinata HOM05D004917 ORTHO05D005954 1.6e-53 213.8 198 55.1
CiPaw.01G001900 Carya illinoinensis HOM05D004917 ORTHO05D005954 2.1e-53 213.4 152 67.8
Dinv26959 Davidia involucrata HOM05D004917 ORTHO05D005954 2.1e-53 213.4 147 69.4
Glyma.17G158400 Glycine max HOM05D004917 ORTHO05D005954 2.1e-53 213.4 190 58.4
Hma1.2p1_0424F.1_g150480 Hydrangea macrophylla HOM05D004917 ORTHO05D005954 2.1e-53 213.4 153 64.7
FvH4_1g18230 Fragaria vesca HOM05D004917 ORTHO05D005954 2.8e-53 213.0 201 56.7
FAN19G0182 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.8e-53 213.0 201 56.7
Phvul.003G232800 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 2.8e-53 213.0 198 56.6
Carub.0008s2673 Capsella rubella HOM05D004917 ORTHO05D005954 3.6e-53 212.6 146 65.1
Thhalv10004770m.g Eutrema salsugineum HOM05D004917 ORTHO05D005954 3.6e-53 212.6 152 66.4
PSO170G3322 Papaver somniferum HOM05D004917 ORTHO05D005954 3.6e-53 212.6 146 69.9
Thecc.01G076300 Theobroma cacao HOM05D004917 ORTHO05D005954 3.6e-53 212.6 186 57.5
FAN26G0787 Fragaria x ananassa HOM05D004917 ORTHO05D005954 4.7e-53 212.2 203 56.2
VMungo0251G1412 Vigna mungo HOM05D004917 ORTHO05D005954 4.7e-53 212.2 203 56.2
Aqoxy1G00260 Aquilegia oxysepala HOM05D004917 ORTHO05D005954 6.1e-53 211.8 205 54.1
Sp2g28930 Schrenkiella parvula HOM05D004917 ORTHO05D005954 6.1e-53 211.8 177 57.1
Thecc.01G076400 Theobroma cacao HOM05D004917 ORTHO05D005954 6.1e-53 211.8 195 56.9
MD02G1189600 Malus domestica HOM05D004917 ORTHO05D005954 8.0e-53 211.5 205 55.6
PSO170G3850 Papaver somniferum HOM05D004917 ORTHO05D005954 8.0e-53 211.5 154 64.9
Sed0017274 Sechium edule HOM05D004917 ORTHO05D005954 1.0e-52 211.1 194 56.2
Atru.chr3.1060 Acer truncatum HOM05D004917 ORTHO05D005954 1.4e-52 210.7 148 68.9
PGSC0003DMG400003322 Solanum tuberosum HOM05D004917 ORTHO05D005954 1.4e-52 210.7 191 56.5
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.8e-52 210.3 150 66.7
AT5G65840 Arabidopsis thaliana HOM05D004917 ORTHO05D005954 2.3e-52 209.9 146 64.4
AUR62007540 Chenopodium quinoa HOM05D004917 ORTHO05D005954 2.3e-52 209.9 134 70.9
Ca_22095_v3 Cicer arietinum L. HOM05D004917 ORTHO05D005954 2.3e-52 209.9 188 58.0
PSO017G2694 Papaver somniferum HOM05D004917 ORTHO05D005954 2.3e-52 209.9 132 73.5
Ciclev10026314m.g Citrus clementina HOM05D004917 ORTHO05D005954 3.0e-52 209.5 181 56.9
CsaV3_2G016370 Cucumis sativus L. HOM05D004917 ORTHO05D005954 3.0e-52 209.5 144 68.1
HanXRQChr09g0262071 Helianthus annuus HOM05D004917 ORTHO05D005954 3.0e-52 209.5 182 56.0
CARHR279840 Cardamine hirsuta HOM05D004917 ORTHO05D005954 4.0e-52 209.1 152 64.5
BcaC04g23243 Brassica carinata HOM05D004917 ORTHO05D005954 5.2e-52 208.8 152 65.8
BolC9t53970H Brassica oleracea HOM05D004917 ORTHO05D005954 5.2e-52 208.8 152 65.8
COL.COLO4_11615 Corchorus olitorius HOM05D004917 ORTHO05D005954 5.2e-52 208.8 142 69.0
Gorai.008G085700 Gossypium raimondii HOM05D004917 ORTHO05D005954 5.2e-52 208.8 196 55.1
AUR62004032 Chenopodium quinoa HOM05D004917 ORTHO05D005954 6.8e-52 208.4 133 70.7
Gohir.D12G076900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 6.8e-52 208.4 140 68.6
CAN.G775.1 Capsicum annuum HOM05D004917 ORTHO05D005954 8.9e-52 208.0 194 56.2
Glyma.17G158500 Glycine max HOM05D004917 ORTHO05D005954 8.9e-52 208.0 193 56.0
TWI74G1062 Tripterygium wilfordii HOM05D004917 ORTHO05D005954 8.9e-52 208.0 191 54.5
Cpa.g.sc673.2 Carica papaya HOM05D004917 ORTHO05D005954 1.2e-51 207.6 143 65.7
Phvul.003G232900 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 1.2e-51 207.6 193 56.5
Sopen02g014680 Solanum pennellii HOM05D004917 ORTHO05D005954 1.5e-51 207.2 192 56.2
Lsat_1_v5_gn_4_160020 Lactuca sativa HOM05D004917 ORTHO05D005954 2.6e-51 206.5 194 56.2
Psat4g080360 Pisum sativum HOM05D004917 ORTHO05D005954 2.6e-51 206.5 188 57.4
C09p10750 Brassica napus HOM05D004917 ORTHO05D005954 3.4e-51 206.1 147 66.7
Lj4g0024725 Lotus japonicus HOM05D004917 ORTHO05D005954 1.3e-50 204.1 192 56.8
Cfa004388 Carpinus fangiana HOM05D004917 ORTHO05D005954 1.7e-50 203.8 178 57.9
FAN28G2407 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.2e-50 203.4 206 54.4
EL10Ac6g15593 Beta vulgaris HOM05D004917 ORTHO05D005954 2.8e-50 203.0 182 56.0
Sc07g0000430 Simmondsia chinensis HOM05D004917 ORTHO05D005954 2.8e-50 203.0 143 65.7
ECA232G4556 Erigeron canadensis HOM05D004917 ORTHO05D005954 3.7e-50 202.6 147 63.9
arahy.Tifrunner.gnm1.ann1.1K25L2 Arachis hypogaea HOM05D004917 ORTHO05D005954 6.3e-50 201.8 192 54.7
arahy.Tifrunner.gnm1.ann1.UB5R5Q Arachis hypogaea HOM05D004917 ORTHO05D005954 8.3e-50 201.4 194 54.1
FvH4_1g18251 Fragaria vesca HOM05D004917 ORTHO05D005954 1.1e-49 201.1 142 68.3
Os03g0729200 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 1.1e-49 201.1 146 67.8
Medtr4g097500 Medicago truncatula HOM05D004917 ORTHO05D005954 3.2e-49 199.5 188 55.9
PGR102G2131 Punica granatum HOM05D004917 ORTHO05D005954 3.2e-49 199.5 171 59.1
Nn5g30667 Nelumbo nucifera HOM05D004917 ORTHO05D005954 7.0e-49 198.4 150 64.7
VMungo0251G2665 Vigna mungo HOM05D004917 ORTHO05D005954 9.2e-49 198.0 200 55.5
SEGI_14750 Sequoiadendron giganteum HOM05D004917 ORTHO05D005954 1.2e-48 197.6 139 64.7
DCAR_014953 Daucus carota HOM05D004917 ORTHO05D005954 1.6e-48 197.2 147 65.3
THA.LOC104827747 Tarenaya hassleriana HOM05D004917 ORTHO05D005954 1.6e-48 197.2 143 64.3
Zm00001eb215580 Zea mays HOM05D004917 ORTHO05D005954 2.0e-48 196.8 189 55.0
PSO170G4503 Papaver somniferum HOM05D004917 ORTHO05D005954 4.5e-48 195.7 132 70.5
PSO017G4293 Papaver somniferum HOM05D004917 ORTHO05D005954 5.9e-48 195.3 141 66.7
Ah.03g140710 Amaranthus hybridus HOM05D004917 ORTHO05D005954 5.0e-47 192.2 179 54.7
Lalb_Chr11g0075991 Lupinus albus HOM05D004917 ORTHO05D005954 6.6e-47 191.8 135 69.6
ATR0739G130 Amborella trichopoda HOM05D004917 ORTHO05D005954 4.7e-45 185.7 131 65.6
CDE02G4371 Ceratophyllum demersum HOM05D004917 ORTHO05D005954 5.8e-43 178.7 162 53.1
CSS0005558 Camellia sinensis var. sinensis HOM05D004917 ORTHO05D005954 6.4e-42 175.3 145 59.3
ClCG02G012210 Citrullus lanatus HOM05D004917 ORTHO05D005954 1.9e-41 173.7 151 58.3
Oeu013341.1 Olea europaea HOM05D004917 ORTHO05D005954 2.4e-41 173.3 105 73.3
MELO3C020846.2 Cucumis melo HOM05D004917 ORTHO05D005954 5.4e-41 172.2 144 59.0
Os03g0729300 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 6.0e-40 168.7 162 54.9
Lj4A165T49 Lonicera japonica HOM05D004917 ORTHO05D005954 1.0e-39 167.9 117 65.8
DCAR_000455 Daucus carota HOM05D004917 ORTHO05D005954 1.7e-39 167.2 110 69.1
FAN26G1896 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.0e-39 166.4 202 48.5
Nitab4.5_0000036g0150 Nicotiana tabacum HOM05D004917 ORTHO05D005954 3.0e-39 166.4 101 74.3
Nitab4.5_0007379g0030 Nicotiana tabacum HOM05D004917 ORTHO05D005954 3.0e-39 166.4 198 47.0
GSVIVG01007168001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.9e-39 166.0 103 72.8
RcHm_v2.0_Chr2g0108771 Rosa chinensis HOM05D004917 ORTHO05D005954 1.9e-38 163.7 144 58.3
Pp3c27_7100 Physcomitrium patens HOM05D004917 ORTHO05D005954 4.3e-38 162.5 141 52.5
Haze_15025 Corylus avellana HOM05D004917 ORTHO05D005954 2.3e-36 156.8 199 45.7
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis HOM05D004917 ORTHO05D005954 4.4e-35 152.5 152 50.0
Peaxi162Scf00449g00417 Petunia axillaris HOM05D004917 ORTHO05D005954 9.2e-33 144.8 156 50.6
GSVIVG01007167001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.0e-31 139.8 118 58.5
QL06p038910 Quercus lobata HOM05D004917 ORTHO05D005954 1.9e-30 137.1 90 72.2
QL02p069743 Quercus lobata HOM05D004917 ORTHO05D005954 2.1e-29 133.7 99 65.7
Hund16417 Selenicereus undatus HOM05D004917 ORTHO05D005954 1.1e-28 131.3 85 71.8
MBI16_g06077_MAGBIO Magnolia biondii HOM05D004917 ORTHO05D005954 9.9e-27 124.8 133 48.9
Zm00001eb056030 Zea mays HOM05D004917 ORTHO05D005954 5.1e-23 112.5 73 68.5
FAN23G2689 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.1e-20 103.2 70 70.0
Aqoxy4G03151 Aquilegia oxysepala HOM05D007024 ORTHO05D008865 3.2e-17 93.2 144 34.7
Nitab4.5_0000848g0140 Nicotiana tabacum HOM05D007024 ORTHO05D008865 4.2e-17 92.8 134 35.8
Nitab4.5_0010883g0010 Nicotiana tabacum HOM05D007024 ORTHO05D008865 1.2e-16 91.3 127 37.8
FAN26G2723 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.5e-16 89.7 133 42.1
Sabra07G0005500 Salix brachista HOM05D004917 ORTHO05D005954 6.0e-16 89.0 107 47.7
Cfa017486 Carpinus fangiana HOM05D007024 ORTHO05D008865 7.8e-16 88.6 134 34.3
Haze_20672 Corylus avellana HOM05D007024 ORTHO05D008865 7.8e-16 88.6 141 34.0
Peaxi162Scf01517g00138 Petunia axillaris HOM05D007024 ORTHO05D008865 1.0e-15 88.2 127 37.0
Carub.0004s1915 Capsella rubella HOM05D007024 ORTHO05D008865 1.7e-15 87.4 142 34.5
CAN.G350.48 Capsicum annuum HOM05D007024 ORTHO05D008865 2.3e-15 87.0 133 36.8
Dinv35695 Davidia involucrata HOM05D001458 ORTHO05D006787 2.3e-15 87.0 179 28.5
CiPaw.09G183100 Carya illinoinensis HOM05D007024 ORTHO05D008865 3.0e-15 86.7 134 35.1
Sopen09g002060 Solanum pennellii HOM05D007024 ORTHO05D008865 3.0e-15 86.7 133 36.8
Sc20g0004190 Simmondsia chinensis HOM05D007024 ORTHO05D008865 3.9e-15 86.3 144 34.0
Solyc09g007190.3 Solanum lycopersicum HOM05D007024 ORTHO05D008865 5.1e-15 85.9 133 36.8
PGSC0003DMG400027897 Solanum tuberosum HOM05D007024 ORTHO05D008865 6.6e-15 85.5 133 36.1
arahy.Tifrunner.gnm1.ann1.F27BB1 Arachis hypogaea HOM05D004917 ORTHO05D005954 1.6e-13 80.9 53 67.9
Zm00001eb030360 Zea mays HOM05D004917 ORTHO05D005954 3.6e-13 79.7 54 66.7
TAR633G0628 Trochodendron aralioides HOM05D007024 ORTHO05D008865 4.8e-13 79.3 156 31.4
CDE04G0730 Ceratophyllum demersum HOM05D007024 ORTHO05D008865 1.5e-11 74.3 130 34.6
Potri.007G007201 Populus trichocarpa HOM05D004917 ORTHO05D005954 4.4e-11 72.8 51 70.6
GSVIVG01004400001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.3e-10 71.2 46 69.6
ATR0582G226 Amborella trichopoda HOM05D007024 ORTHO05D008865 1.7e-10 70.9 144 31.2
Cre17.g697050 Chlamydomonas reinhardtii HOM05D004917 ORTHO05D005954 1.7e-10 70.9 140 35.7
QL06p038908 Quercus lobata HOM05D004917 ORTHO05D005954 2.2e-10 70.5 46 69.6
MCO14G127 Micromonas commoda HOM05D004917 ORTHO05D005954 2.9e-10 70.1 69 43.5
ATR0739G073 Amborella trichopoda HOM05D004917 ORTHO05D005954 5.4e-09 65.9 66 51.5
PRCOL_00004664 Prasinoderma coloniale HOM05D004917 ORTHO05D005954 7.1e-09 65.5 64 43.8
ATR0739G160 Amborella trichopoda HOM05D004917 ORTHO05D005954 1.2e-08 64.7 48 60.4
Gohir.A12G080465 Gossypium hirsutum HOM05D004917 ORTHO05D005954 2.7e-08 63.5 99 42.4
MCO07G374 Micromonas commoda HOM05D004917 ORTHO05D005954 2.7e-08 63.5 129 34.9
Haze_02356 Corylus avellana HOM05D004917 ORTHO05D005954 5.1e-07 59.3 36 69.4
GSVIVG01007445001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.1e-06 58.2 101 38.6
Oeu013340.1 Olea europaea HOM05D004917 ORTHO05D005954 1.5e-06 57.8 81 40.7
MCO06G061 Micromonas commoda HOM05D004917 ORTHO05D005954 9.6e-06 55.1 53 45.3


User provided reference genes

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