Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g11974 Utricularia gibba HOM05D001976 ORTHO05D001960 1.2e-159 566.6 314 100.0
SalBow4G2190 Salvia bowleyana HOM05D001976 ORTHO05D001960 1.9e-29 134.0 273 42.1
unitig_747.g21858 Utricularia gibba HOM05D001976 ORTHO05D001960 3.3e-29 133.3 279 44.4
MSTRG.27068 Avicennia marina HOM05D001976 ORTHO05D001960 4.5e-26 122.9 317 38.8
MSTRG.8694 Avicennia marina HOM05D001976 ORTHO05D001960 2.9e-25 120.2 322 37.9
Migut.F00266 Erythranthe guttata HOM05D001976 ORTHO05D001960 8.5e-25 118.6 228 43.4
SGA_v2.0_scaffold44G16760 Striga asiatica HOM05D001976 ORTHO05D001960 7.2e-24 115.5 275 36.7
SalBow2G1963 Salvia bowleyana HOM05D001976 ORTHO05D001960 2.6e-18 97.1 278 33.5
SGA_v2.0_scaffold192G40612 Striga asiatica HOM05D001976 ORTHO05D001960 3.4e-18 96.7 258 36.0
Oeu040007.1 Olea europaea HOM05D001976 ORTHO05D001960 3.2e-16 90.1 284 34.9
Oeu036895.1 Olea europaea HOM05D001976 ORTHO05D001960 2.3e-14 84.0 285 33.3
Hma1.2p1_0327F.1_g126540 Hydrangea macrophylla HOM05D001976 ORTHO05D001960 5.2e-14 82.8 238 36.1
Migut.F01067 Erythranthe guttata HOM05D001976 ORTHO05D001960 6.7e-14 82.4 276 32.2
Nitab4.5_0000472g0330 Nicotiana tabacum HOM05D001976 ORTHO05D001960 7.4e-13 79.0 263 33.8
Oeu061670.1 Olea europaea HOM05D001976 ORTHO05D001960 7.4e-13 79.0 247 34.4
Peaxi162Scf00057g00006 Petunia axillaris HOM05D001976 ORTHO05D001960 1.3e-12 78.2 301 31.2
Nitab4.5_0006643g0020 Nicotiana tabacum HOM05D001976 ORTHO05D001960 2.2e-12 77.4 211 36.5
Solyc03g007710.3 Solanum lycopersicum HOM05D001976 ORTHO05D001960 6.3e-12 75.9 221 34.8
PGSC0003DMG400020890 Solanum tuberosum HOM05D001976 ORTHO05D001960 1.4e-11 74.7 268 29.9
Nitab4.5_0000472g0360 Nicotiana tabacum HOM05D001976 ORTHO05D001960 3.1e-11 73.6 205 34.1
PGSC0003DMG400020887 Solanum tuberosum HOM05D001976 ORTHO05D001960 3.1e-11 73.6 263 33.8
vmacro06602 Vaccinium macrocarpon HOM05D001976 ORTHO05D001960 4.1e-11 73.2 243 34.6
SalBow8G2483 Salvia bowleyana HOM05D001976 ORTHO05D001960 1.2e-10 71.6 113 45.1
Solyc03g007700.1 Solanum lycopersicum HOM05D001976 ORTHO05D001960 1.2e-10 71.6 253 33.6
Nitab4.5_0000472g0370 Nicotiana tabacum HOM05D001976 ORTHO05D001960 2.0e-10 70.9 221 34.4
Sopen03g003630 Solanum pennellii HOM05D001976 ORTHO05D001960 2.0e-10 70.9 253 33.2
Nitab4.5_0015034g0010 Nicotiana tabacum HOM05D001976 ORTHO05D001960 4.5e-10 69.7 205 34.6
Peaxi162Scf00057g00023 Petunia axillaris HOM05D001976 ORTHO05D001960 4.5e-10 69.7 220 36.4
Sopen03g003640 Solanum pennellii HOM05D001976 ORTHO05D001960 5.9e-10 69.3 215 33.0
Sopen03g003650 Solanum pennellii HOM05D001976 ORTHO05D001960 7.7e-10 68.9 252 30.6
PGSC0003DMG400020889 Solanum tuberosum HOM05D001976 ORTHO05D001960 7.7e-10 68.9 236 32.2
Dinv28365 Davidia involucrata HOM05D001976 ORTHO05D001960 1.3e-09 68.2 245 33.9
Eucgr.L01487 Eucalyptus grandis HOM05D001976 ORTHO05D001960 1.3e-09 68.2 224 32.1
Lj1A1009T50 Lonicera japonica HOM05D001976 ORTHO05D001960 1.3e-09 68.2 233 30.9
Actinidia03149 Actinidia chinensis HOM05D001976 ORTHO05D001960 2.9e-09 67.0 287 32.4
Nitab4.5_0010456g0010 Nicotiana tabacum HOM05D001976 ORTHO05D001960 2.9e-09 67.0 222 32.4
MD01G1211000 Malus domestica HOM05D001976 ORTHO05D001960 3.8e-09 66.6 270 29.3
Actinidia31851 Actinidia chinensis HOM05D001976 ORTHO05D001960 5.0e-09 66.2 311 30.5
Solyc03g007720.3 Solanum lycopersicum HOM05D001976 ORTHO05D001960 5.0e-09 66.2 257 31.1
CAN.G126.5 Capsicum annuum HOM05D001976 ORTHO05D001960 8.5e-09 65.5 258 32.6
Hma1.2p1_0142F.1_g064430 Hydrangea macrophylla HOM05D001976 ORTHO05D001960 1.1e-08 65.1 258 32.9
CAN.G926.1 Capsicum annuum HOM05D001976 ORTHO05D001960 1.9e-08 64.3 204 33.3
CsaV3_5G000980 Cucumis sativus L. HOM05D001976 ORTHO05D001960 1.9e-08 64.3 216 33.8
Rhsim03G0195500 Rhododendron simsii HOM05D001976 ORTHO05D001960 1.9e-08 64.3 204 33.8
RhsimUnG0097500 Rhododendron simsii HOM05D001976 ORTHO05D001960 1.9e-08 64.3 204 33.8
SGA_v2.0_scaffold10G05276 Striga asiatica HOM05D001976 ORTHO05D001960 1.9e-08 64.3 237 32.5
Cc00_g29320 Coffea canephora HOM05D001976 ORTHO05D001960 2.5e-08 63.9 244 29.9
Dinv35286 Davidia involucrata HOM05D001976 ORTHO05D001960 7.2e-08 62.4 225 32.9
GSVIVG01019432001 Vitis vinifera HOM05D001976 ORTHO05D001960 7.2e-08 62.4 281 30.6
Actinidia34172 Actinidia chinensis HOM05D001976 ORTHO05D001960 2.1e-07 60.8 235 31.9
Oeu040008.1 Olea europaea HOM05D001976 ORTHO05D001960 8.0e-07 58.9 245 31.8
DCAR_020285 Daucus carota HOM05D001976 ORTHO05D001960 1.0e-06 58.5 206 28.6
Cpa.g.sc3.7 Carica papaya HOM05D001976 ORTHO05D001960 1.8e-06 57.8 215 32.6
Actinidia08600 Actinidia chinensis HOM05D001976 ORTHO05D001960 2.3e-06 57.4 242 29.3
Manes.06G154200 Manihot esculenta HOM05D001976 ORTHO05D001960 2.3e-06 57.4 273 30.4
CSS0030727 Camellia sinensis var. sinensis HOM05D001976 ORTHO05D001960 3.0e-06 57.0 240 30.8
DCAR_014525 Daucus carota HOM05D001976 ORTHO05D001960 4.0e-06 56.6 179 35.8
FAN08G2781 Fragaria x ananassa HOM05D001976 ORTHO05D001960 4.0e-06 56.6 273 29.3
Actinidia06781 Actinidia chinensis HOM05D001976 ORTHO05D001960 5.2e-06 56.2 185 36.2
Lsat_1_v5_gn_2_133481 Lactuca sativa HOM05D001976 ORTHO05D001960 6.7e-06 55.8 313 28.8
Potri.015G027500 Populus trichocarpa HOM05D001976 ORTHO05D001960 8.8e-06 55.5 236 30.9


User provided reference genes

Program Settings