Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 1.5e-135 486.1 238 100.0
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 6.1e-92 341.3 239 69.9
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 1.5e-90 336.7 239 69.5
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 9.1e-88 327.4 240 67.9
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 1.0e-86 323.9 240 67.1
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 3.8e-86 322.0 209 74.2
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 5.0e-86 321.6 241 63.9
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 1.1e-85 320.5 231 67.5
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 3.2e-85 318.9 241 64.3
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 5.5e-85 318.2 238 65.1
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 1.2e-84 317.0 239 64.9
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 1.6e-84 316.6 230 67.8
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 1.6e-84 316.6 232 68.5
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 6.1e-84 314.7 241 65.1
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 6.1e-84 314.7 232 67.7
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.8e-83 313.2 238 66.0
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.8e-83 313.2 238 64.7
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 1.8e-83 313.2 222 67.1
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 2.3e-83 312.8 221 68.3
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 3.0e-83 312.4 217 69.6
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 3.0e-83 312.4 221 68.3
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 4.0e-83 312.0 239 66.1
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 5.2e-83 311.6 226 66.8
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 6.7e-83 311.2 228 64.9
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 8.8e-83 310.8 231 64.5
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.2e-82 310.5 237 66.2
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.2e-82 310.5 232 66.8
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 1.2e-82 310.5 236 63.6
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 1.5e-82 310.1 238 62.2
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 1.5e-82 310.1 237 62.9
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 1.5e-82 310.1 221 67.4
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 1.5e-82 310.1 237 64.1
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 2.6e-82 309.3 231 63.6
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 3.3e-82 308.9 230 63.9
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 3.3e-82 308.9 224 66.1
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 4.4e-82 308.5 237 62.9
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 5.7e-82 308.1 237 65.8
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 5.7e-82 308.1 231 64.1
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 5.7e-82 308.1 222 68.9
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 9.7e-82 307.4 231 64.1
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.3e-81 307.0 242 62.8
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 1.3e-81 307.0 234 64.1
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.7e-81 306.6 219 68.9
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 1.7e-81 306.6 223 65.9
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 1.7e-81 306.6 225 66.7
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.8e-81 305.8 218 67.4
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 2.8e-81 305.8 236 65.7
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.8e-81 305.8 231 63.6
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 2.8e-81 305.8 227 64.8
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 2.8e-81 305.8 242 64.5
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 3.7e-81 305.4 238 63.4
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 4.8e-81 305.1 238 62.6
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 4.8e-81 305.1 231 63.2
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 4.8e-81 305.1 239 65.3
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 4.8e-81 305.1 228 64.9
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 6.3e-81 304.7 242 62.4
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 8.2e-81 304.3 239 64.9
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 1.1e-80 303.9 234 64.1
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.4e-80 303.5 231 63.2
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 1.4e-80 303.5 232 65.9
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 2.4e-80 302.8 231 63.6
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 3.1e-80 302.4 230 62.2
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 3.1e-80 302.4 222 64.0
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 4.1e-80 302.0 223 65.5
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 4.1e-80 302.0 238 63.9
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 5.3e-80 301.6 217 65.0
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 7.0e-80 301.2 220 65.5
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 7.0e-80 301.2 238 63.9
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.6e-79 300.1 221 67.4
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 4.5e-79 298.5 219 66.7
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 7.7e-79 297.7 239 61.5
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 1.7e-78 296.6 238 61.3
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.9e-78 295.8 238 63.0
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 2.9e-78 295.8 241 61.8
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 5.0e-78 295.0 230 63.5
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 8.5e-78 294.3 225 64.0
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 8.5e-78 294.3 221 63.8
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 1.1e-77 293.9 225 64.0
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 2.5e-77 292.7 208 68.3
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 5.5e-77 291.6 222 64.0
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 1.6e-76 290.0 222 64.9
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 2.7e-76 289.3 223 63.2
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 3.6e-76 288.9 200 70.5
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 3.0e-75 285.8 224 62.1
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.0e-75 285.4 240 61.2
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 4.0e-75 285.4 299 52.8
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 4.0e-75 285.4 227 61.7
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 1.2e-74 283.9 239 63.2
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 2.0e-74 283.1 217 65.9
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 2.6e-74 282.7 226 61.5
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 2.6e-74 282.7 226 61.5
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 2.6e-74 282.7 226 61.5
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 3.4e-74 282.3 228 61.4
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 3.4e-74 282.3 228 61.4
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 7.5e-74 281.2 225 64.0
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 1.7e-73 280.0 207 64.3
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 4.8e-73 278.5 195 68.7
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 8.3e-73 277.7 195 69.2
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 2.4e-72 276.2 228 60.1
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 4.1e-72 275.4 195 68.2
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 1.2e-66 257.3 206 63.1
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 5.7e-66 255.0 199 62.8
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 7.5e-66 254.6 184 67.9
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 2.2e-65 253.1 222 55.9
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 2.0e-63 246.5 183 66.7
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 2.0e-63 246.5 225 55.6
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 7.3e-61 238.0 220 53.6
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 2.6e-58 229.6 181 62.4
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 4.1e-56 222.2 220 52.3
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 3.5e-55 219.2 198 58.6
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 3.5e-55 219.2 244 49.6
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 3.5e-55 219.2 188 57.4
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.2e-52 210.7 252 49.2
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 1.3e-49 200.7 192 54.7
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 8.3e-49 198.0 143 69.9
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.0e-46 191.0 131 71.8
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 9.5e-45 184.5 141 64.5
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 2.1e-28 130.2 184 39.1
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 1.8e-27 127.1 210 39.0
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.2e-24 115.9 92 58.7
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.7e-22 110.5 250 32.8
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 1.9e-21 107.1 202 35.1
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 7.3e-21 105.1 202 37.1
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 6.7e-14 82.0 48 77.1
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.8e-12 76.6 48 72.9
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 3.1e-11 73.2 61 55.7
Cfa022648 Carpinus fangiana HOM05D037152 ORTHO05D034124 6.4e-09 65.5 201 26.9


User provided reference genes

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