Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 6.4e-76 287.3 146 100.0
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 1.3e-63 246.5 146 89.0
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.1e-56 223.4 148 79.1
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.5e-56 223.0 148 77.7
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 1.5e-56 223.0 148 78.4
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 1.9e-56 222.6 148 76.4
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 1.9e-56 222.6 148 78.4
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 4.3e-56 221.5 148 77.7
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 5.6e-56 221.1 150 74.0
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 7.4e-56 220.7 150 78.0
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.7e-55 218.4 148 76.4
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 1.8e-54 216.1 146 77.4
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 2.4e-54 215.7 161 70.8
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 4.0e-54 214.9 150 76.7
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 5.3e-54 214.5 149 77.2
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 5.3e-54 214.5 151 76.2
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 9.0e-54 213.8 137 80.3
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 9.0e-54 213.8 144 75.0
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 2.0e-53 212.6 173 68.8
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 2.6e-53 212.2 136 78.7
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 4.5e-53 211.5 147 76.2
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 4.5e-53 211.5 135 78.5
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 5.8e-53 211.1 135 77.8
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 5.8e-53 211.1 137 75.2
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 9.9e-53 210.3 136 77.2
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 1.3e-52 209.9 137 75.9
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 1.3e-52 209.9 150 74.7
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 1.7e-52 209.5 135 78.5
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 2.2e-52 209.1 140 76.4
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 2.2e-52 209.1 135 77.8
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 2.2e-52 209.1 135 77.8
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 2.2e-52 209.1 147 74.8
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 1.1e-51 206.8 137 76.6
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 1.4e-51 206.5 137 76.6
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 4.2e-51 204.9 137 75.9
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 4.2e-51 204.9 137 75.9
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 5.5e-51 204.5 137 77.4
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 7.1e-51 204.1 137 76.6
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 9.3e-51 203.8 137 75.2
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 9.3e-51 203.8 137 75.2
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 1.2e-50 203.4 140 75.7
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.6e-50 203.0 137 74.5
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 2.1e-50 202.6 137 74.5
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 2.1e-50 202.6 137 74.5
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 2.1e-50 202.6 137 74.5
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 2.1e-50 202.6 137 74.5
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 2.1e-50 202.6 137 74.5
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 2.1e-50 202.6 137 75.9
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 2.7e-50 202.2 137 78.1
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 2.7e-50 202.2 157 70.7
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 2.7e-50 202.2 157 70.7
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 3.5e-50 201.8 157 71.3
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 3.5e-50 201.8 152 71.1
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 3.5e-50 201.8 135 76.3
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 4.6e-50 201.4 150 71.3
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 4.6e-50 201.4 137 73.7
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 6.0e-50 201.1 137 75.2
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 6.0e-50 201.1 137 75.2
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 6.0e-50 201.1 157 68.8
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 7.9e-50 200.7 137 76.6
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 7.9e-50 200.7 157 70.7
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 1.0e-49 200.3 136 75.7
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 1.3e-49 199.9 165 67.3
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 1.3e-49 199.9 114 85.1
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 2.3e-49 199.1 137 75.2
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 2.3e-49 199.1 137 75.2
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 2.3e-49 199.1 137 73.7
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 3.0e-49 198.7 165 64.8
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 3.9e-49 198.4 141 75.9
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 3.9e-49 198.4 164 65.2
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 3.9e-49 198.4 137 73.7
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 6.7e-49 197.6 138 76.8
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 6.7e-49 197.6 138 76.8
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 6.7e-49 197.6 138 76.8
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 6.7e-49 197.6 137 75.2
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 8.7e-49 197.2 140 74.3
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.1e-48 196.8 169 64.5
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 1.9e-48 196.1 136 76.5
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 1.9e-48 196.1 136 75.0
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.9e-48 196.1 137 71.5
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 1.9e-48 196.1 161 66.5
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 3.3e-48 195.3 140 70.7
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 3.3e-48 195.3 134 73.9
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 4.3e-48 194.9 140 73.6
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 4.3e-48 194.9 136 74.3
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 7.4e-48 194.1 140 72.9
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 9.6e-48 193.7 136 76.5
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.3e-47 193.4 136 75.7
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 1.6e-47 193.0 134 76.1
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.8e-47 192.2 143 70.6
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.8e-47 192.2 140 72.9
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 2.8e-47 192.2 124 76.6
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 3.7e-47 191.8 136 74.3
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 3.7e-47 191.8 136 75.7
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 4.8e-47 191.4 140 72.1
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 4.8e-47 191.4 135 74.8
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 8.2e-47 190.7 141 70.9
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 1.1e-46 190.3 139 72.7
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 1.4e-46 189.9 103 90.3
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 1.4e-46 189.9 143 70.6
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 1.8e-46 189.5 108 85.2
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 4.0e-46 188.3 140 72.1
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 4.0e-46 188.3 135 72.6
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 5.3e-46 188.0 104 87.5
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 6.9e-46 187.6 137 71.5
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 6.9e-46 187.6 146 65.8
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 1.2e-45 186.8 137 73.7
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.5e-45 186.4 140 72.1
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 5.8e-45 184.5 143 67.1
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 6.5e-44 181.0 166 62.7
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 8.4e-44 180.6 140 67.1
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 1.8e-41 172.9 158 62.7
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 1.1e-40 170.2 143 62.9
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 1.4e-38 163.3 144 63.9
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 1.9e-35 152.9 97 74.2
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.0e-33 147.1 143 54.5
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.4e-33 146.7 134 52.2
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 8.8e-33 144.1 94 72.3
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 1.5e-32 143.3 127 55.1
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 1.7e-31 139.8 126 57.1
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 4.8e-31 138.3 135 57.8
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 5.3e-30 134.8 137 56.9
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 2.7e-26 122.5 72 80.6
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 3.3e-24 115.5 116 57.8
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 3.8e-20 102.1 90 53.3
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 3.0e-17 92.4 86 54.7
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 2.0e-16 89.7 56 78.6
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 4.4e-16 88.6 54 79.6
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 4.4e-16 88.6 54 79.6
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 3.5e-13 79.0 121 37.2


User provided reference genes

Program Settings