Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11886 Utricularia gibba HOM05D004795 ORTHO05D005518 4.0e-108 394.8 205 100.0
unitig_748.g8746 Utricularia gibba HOM05D004795 ORTHO05D005518 1.1e-38 164.1 143 67.1
MSTRG.3555 Avicennia marina HOM05D004795 ORTHO05D005518 3.4e-22 109.4 212 40.6
Dinv33956 Davidia involucrata HOM05D001490 ORTHO05D001450 2.2e-21 106.7 168 42.3
Oeu050378.1 Olea europaea HOM05D004795 ORTHO05D005518 1.8e-20 103.6 169 45.6
Nitab4.5_0000912g0060 Nicotiana tabacum HOM05D004795 ORTHO05D005518 5.4e-20 102.1 208 38.9
SGA_v2.0_scaffold115G32104 Striga asiatica HOM05D004795 ORTHO05D005518 7.0e-20 101.7 172 40.7
CAN.G625.30 Capsicum annuum HOM05D004795 ORTHO05D005518 9.1e-20 101.3 180 40.6
Oeu016627.1 Olea europaea HOM05D004795 ORTHO05D005518 9.1e-20 101.3 165 46.1
Sopen02g030830 Solanum pennellii HOM05D004795 ORTHO05D005518 1.6e-19 100.5 180 41.7
Migut.L00330 Erythranthe guttata HOM05D004795 ORTHO05D005518 7.7e-19 98.2 184 44.0
Lsat_1_v5_gn_4_154580 Lactuca sativa HOM05D004795 ORTHO05D005518 1.7e-18 97.1 170 42.9
Cc07_g08730 Coffea canephora HOM05D004795 ORTHO05D005518 2.9e-18 96.3 209 40.2
PGSC0003DMG402026390 Solanum tuberosum HOM05D004795 ORTHO05D005518 6.5e-18 95.1 207 37.2
Oeu039734.1 Olea europaea HOM05D004795 ORTHO05D005518 1.5e-17 94.0 174 41.4
CANSAT78G0274 Cannabis sativa HOM05D004795 ORTHO05D005518 2.5e-17 93.2 188 39.4
Rhsim10G0068600 Rhododendron simsii HOM05D004795 ORTHO05D005518 3.2e-17 92.8 170 44.1
Peaxi162Scf00394g00712 Petunia axillaris HOM05D004795 ORTHO05D005518 4.2e-17 92.4 162 42.0
HanXRQChr11g0325401 Helianthus annuus HOM05D004795 ORTHO05D005518 7.2e-17 91.7 174 40.8
DCAR_025909 Daucus carota HOM05D004795 ORTHO05D005518 9.5e-17 91.3 171 38.6
QL02p051034 Quercus lobata HOM05D004795 ORTHO05D005518 2.1e-16 90.1 171 39.2
QL12p016552 Quercus lobata HOM05D004795 ORTHO05D005518 2.8e-16 89.7 171 39.2
HanXRQChr11g0330661 Helianthus annuus HOM05D004795 ORTHO05D005518 2.3e-15 86.7 160 41.9
Ah.16g101690 Amaranthus hybridus HOM05D004795 ORTHO05D005518 4.0e-15 85.9 165 38.8
Eucgr.J01506 Eucalyptus grandis HOM05D004795 ORTHO05D005518 4.0e-15 85.9 182 40.1
Cpa.g.sc170.57 Carica papaya HOM05D004795 ORTHO05D005518 5.2e-15 85.5 196 40.3
Nn3g17899 Nelumbo nucifera HOM05D004795 ORTHO05D005518 8.8e-15 84.7 173 39.9
Thecc.04G132300 Theobroma cacao HOM05D004795 ORTHO05D005518 8.8e-15 84.7 182 37.4
COL.COLO4_09348 Corchorus olitorius HOM05D004795 ORTHO05D005518 2.6e-14 83.2 180 35.6
MD09G1253700 Malus domestica HOM05D004795 ORTHO05D005518 2.6e-14 83.2 194 39.2
PGR004G2449 Punica granatum HOM05D004795 ORTHO05D005518 2.6e-14 83.2 162 41.4
Duzib211G0180 Durio zibethinus HOM05D004795 ORTHO05D005518 4.4e-14 82.4 171 36.8
Sabra04G0081300 Salix brachista HOM05D004795 ORTHO05D005518 4.4e-14 82.4 200 35.0
MD17G1245500 Malus domestica HOM05D004795 ORTHO05D005518 5.7e-14 82.0 183 39.3
CiPaw.03G062800 Carya illinoinensis HOM05D004795 ORTHO05D005518 9.8e-14 81.3 193 38.3
TAR629G1480 Trochodendron aralioides HOM05D004795 ORTHO05D005518 9.8e-14 81.3 187 38.5
AT1G67035 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 1.3e-13 80.9 160 40.6
Prupe.3G143600 Prunus persica HOM05D004795 ORTHO05D005518 1.3e-13 80.9 182 39.0
Cfa007915 Carpinus fangiana HOM05D004795 ORTHO05D005518 1.7e-13 80.5 182 38.5
Duzib133G0847 Durio zibethinus HOM05D004795 ORTHO05D005518 1.7e-13 80.5 181 34.8
Duzib138G0938 Durio zibethinus HOM05D004795 ORTHO05D005518 2.2e-13 80.1 181 35.4
Phvul.008G007200 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 2.2e-13 80.1 160 41.9
Gohir.D11G325800 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.8e-13 79.7 180 35.0
Nitab4.5_0004416g0090 Nicotiana tabacum HOM05D004795 ORTHO05D005518 2.8e-13 79.7 169 38.5
TAR371G0696 Trochodendron aralioides HOM05D004795 ORTHO05D005518 4.9e-13 79.0 191 38.2
VMungo1383G1737 Vigna mungo HOM05D004795 ORTHO05D005518 6.3e-13 78.6 165 38.8
arahy.Tifrunner.gnm1.ann1.HZ9SBP Arachis hypogaea HOM05D001490 ORTHO05D005518 8.3e-13 78.2 234 35.9
VMungo0464G1679 Vigna mungo HOM05D004795 ORTHO05D005518 8.3e-13 78.2 190 37.9
Atru.chr1.1662 Acer truncatum HOM05D004795 ORTHO05D005518 1.4e-12 77.4 169 36.7
TAR622G0902 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.4e-12 77.4 189 38.1
Manes.02G069600 Manihot esculenta HOM05D004795 ORTHO05D005518 1.8e-12 77.0 165 37.6
THA.LOC104805574 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 1.8e-12 77.0 227 32.2
Gohir.D11G326300 Gossypium hirsutum HOM05D004795 ORTHO05D005518 3.1e-12 76.3 210 32.4
Sabra17G0096100 Salix brachista HOM05D004795 ORTHO05D005518 3.1e-12 76.3 204 32.8
BraA07t31003Z Brassica rapa HOM05D004795 ORTHO05D005518 4.1e-12 75.9 173 35.3
Sc11g0008370 Simmondsia chinensis HOM05D004795 ORTHO05D005518 4.1e-12 75.9 191 35.6
TWI53G1522 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 4.1e-12 75.9 184 37.5
BraA02t06447Z Brassica rapa HOM05D004795 ORTHO05D005518 9.2e-12 74.7 204 33.8
MELO3C023735.2 Cucumis melo HOM05D004795 ORTHO05D005518 9.2e-12 74.7 170 35.3
CsaV3_3G020240 Cucumis sativus L. HOM05D004795 ORTHO05D005518 9.2e-12 74.7 168 35.1
Glyma.13G045200 Glycine max HOM05D004795 ORTHO05D005518 9.2e-12 74.7 165 37.6
Gohir.D11G325700 Gossypium hirsutum HOM05D004795 ORTHO05D005518 9.2e-12 74.7 180 35.0
TWI77G0518 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 9.2e-12 74.7 211 33.6
BolC2t08386H Brassica oleracea HOM05D004795 ORTHO05D005518 1.2e-11 74.3 199 35.2
Thhalv10019032m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 2.7e-11 73.2 229 34.1
BcaB05g24226 Brassica carinata HOM05D004795 ORTHO05D005518 3.5e-11 72.8 185 32.4
Ciclev10012794m.g Citrus clementina HOM05D004795 ORTHO05D005518 4.5e-11 72.4 164 35.4
Potri.017G116100 Populus trichocarpa HOM05D004795 ORTHO05D005518 5.9e-11 72.0 200 33.5
Thhalv10027906m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 7.8e-11 71.6 218 33.5
TPR.G31528 Trifolium pratense HOM05D004795 ORTHO05D005518 1.3e-10 70.9 181 37.0
A04p11270 Brassica napus HOM05D004795 ORTHO05D005518 1.7e-10 70.5 218 33.0
A07p33770 Brassica napus HOM05D004795 ORTHO05D005518 1.7e-10 70.5 173 35.3
BraA04t16787Z Brassica rapa HOM05D004795 ORTHO05D005518 1.7e-10 70.5 218 33.0
Glyma.08G366700 Glycine max HOM05D004795 ORTHO05D005518 1.7e-10 70.5 164 39.6
BcaC02g09641 Brassica carinata HOM05D004795 ORTHO05D005518 2.3e-10 70.1 196 34.2
Lalb_Chr10g0091311 Lupinus albus HOM05D004795 ORTHO05D005518 2.3e-10 70.1 167 38.3
BolC4t26077H Brassica oleracea HOM05D004795 ORTHO05D005518 2.9e-10 69.7 218 33.0
Phvul.004G066100 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 2.9e-10 69.7 197 35.0
Solyc02g086140.2 Solanum lycopersicum HOM05D004795 ORTHO05D005518 2.9e-10 69.7 91 47.3
ECA232G0641 Erigeron canadensis HOM05D000072 ORTHO05D000026 5.0e-10 68.9 103 47.6
PGR042G3836 Punica granatum HOM05D004795 ORTHO05D005518 5.0e-10 68.9 207 34.3
Carub.0002s1332 Capsella rubella HOM05D004795 ORTHO05D005518 8.6e-10 68.2 158 37.3
CiPaw.04G043000 Carya illinoinensis HOM05D004795 ORTHO05D005518 8.6e-10 68.2 172 36.0
Haze_14167 Corylus avellana HOM05D004795 ORTHO05D005518 8.6e-10 68.2 178 35.4
Psat3g098240 Pisum sativum HOM05D004795 ORTHO05D005518 8.6e-10 68.2 167 34.7
CARHR214290 Cardamine hirsuta HOM05D004795 ORTHO05D005518 1.5e-09 67.4 223 32.3
Ca_08078_v3 Cicer arietinum L. HOM05D004795 ORTHO05D005518 1.5e-09 67.4 172 34.9
Sp5g21970 Schrenkiella parvula HOM05D004795 ORTHO05D005518 1.5e-09 67.4 220 32.3
C02p22330 Brassica napus HOM05D004795 ORTHO05D005518 1.9e-09 67.0 178 33.7
C04p44990 Brassica napus HOM05D004795 ORTHO05D005518 1.9e-09 67.0 222 32.4
Aa31LG2G3430 Aethionema arabicum HOM05D004795 ORTHO05D005518 3.3e-09 66.2 184 34.2
Glyma.18G295700 Glycine max HOM05D004795 ORTHO05D005518 3.3e-09 66.2 167 37.1
BcaB06g27183 Brassica carinata HOM05D004795 ORTHO05D005518 4.3e-09 65.9 196 34.7
BcaC03g14785 Brassica carinata HOM05D004795 ORTHO05D005518 5.6e-09 65.5 209 32.1
BolC6t39123H Brassica oleracea HOM05D004795 ORTHO05D005518 7.3e-09 65.1 168 33.3
ClCG05G012330 Citrullus lanatus HOM05D004795 ORTHO05D005518 7.3e-09 65.1 160 34.4
Sed0015257 Sechium edule HOM05D004795 ORTHO05D005518 7.3e-09 65.1 178 34.3
CARHR059450 Cardamine hirsuta HOM05D004795 ORTHO05D005518 9.5e-09 64.7 157 35.7
Aa31LG9G17140 Aethionema arabicum HOM05D004795 ORTHO05D005518 1.2e-08 64.3 222 32.9
AL2G25370 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 1.6e-08 63.9 157 37.6
BcaNung06250 Brassica carinata HOM05D004795 ORTHO05D005518 1.6e-08 63.9 175 32.6
FAN09G4185 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.6e-08 63.9 206 31.6
Manes.01G111300 Manihot esculenta HOM05D004795 ORTHO05D005518 1.6e-08 63.9 166 33.1
Gorai.008G056400 Gossypium raimondii HOM05D004795 ORTHO05D005518 2.1e-08 63.5 107 42.1
AUR62023290 Chenopodium quinoa HOM05D004795 ORTHO05D005518 2.8e-08 63.2 99 42.4
AUR62009011 Chenopodium quinoa HOM05D004795 ORTHO05D005518 6.1e-08 62.0 99 41.4
AUR62043981 Chenopodium quinoa HOM05D004795 ORTHO05D005518 6.1e-08 62.0 99 41.4
THA.LOC104822635 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 6.1e-08 62.0 200 31.5
Lj2g0010000 Lotus japonicus HOM05D004795 ORTHO05D005518 8.0e-08 61.6 214 29.4
C06p43160 Brassica napus HOM05D004795 ORTHO05D005518 1.4e-07 60.8 178 32.6
FvH4_6g36230 Fragaria vesca HOM05D004795 ORTHO05D005518 1.4e-07 60.8 206 33.0
FAN14G2363 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.4e-07 60.8 206 33.0
FAN14G5069 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.4e-07 60.8 206 33.0
Gohir.D12G053200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.4e-07 60.8 107 41.1
Sp7g03720 Schrenkiella parvula HOM05D004795 ORTHO05D005518 1.4e-07 60.8 216 30.6
FAN02G3195 Fragaria x ananassa HOM05D004795 ORTHO05D005518 2.3e-07 60.1 207 32.4
FAN05G2248 Fragaria x ananassa HOM05D004795 ORTHO05D005518 2.3e-07 60.1 207 32.4
RcHm_v2.0_Chr2g0148201 Rosa chinensis HOM05D004795 ORTHO05D005518 2.3e-07 60.1 194 32.0
Aqoxy3G00247 Aquilegia oxysepala HOM05D004795 ORTHO05D005518 3.0e-07 59.7 100 44.0
Lj1g0003158 Lotus japonicus HOM05D004795 ORTHO05D005518 4.0e-07 59.3 180 32.2
Gorai.007G182000 Gossypium raimondii HOM05D004795 ORTHO05D005518 5.2e-07 58.9 195 29.7
Ah.06g188560 Amaranthus hybridus HOM05D004795 ORTHO05D005518 6.8e-07 58.5 121 37.2
Glyma.19G049900 Glycine max HOM05D004795 ORTHO05D005518 1.2e-06 57.8 196 31.6
Gohir.A11G163900 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.0e-06 57.0 195 29.2
Carub.0005s1274 Capsella rubella HOM05D004795 ORTHO05D005518 4.4e-06 55.8 221 30.3
AL7G52500 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 5.7e-06 55.5 235 28.5
Medtr7g082230 Medicago truncatula HOM05D004795 ORTHO05D005518 9.8e-06 54.7 175 32.0


User provided reference genes

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