Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11869 Utricularia gibba HOM05D006680 ORTHO05D008206 5.7e-48 194.1 113 100.0
Migut.G00148 Erythranthe guttata HOM05D006680 ORTHO05D008206 2.5e-27 125.6 120 57.5
Atru.chr4.2870 Acer truncatum HOM05D006680 ORTHO05D008206 1.0e-25 120.2 122 54.9
CAN.G129.31 Capsicum annuum HOM05D006680 ORTHO05D008206 2.3e-25 119.0 120 54.2
Oeu001107.1 Olea europaea HOM05D006680 ORTHO05D008206 2.3e-25 119.0 120 53.3
Sopen01g028370 Solanum pennellii HOM05D006680 ORTHO05D008206 5.2e-25 117.9 120 52.5
Ciclev10006049m.g Citrus clementina HOM05D006680 ORTHO05D008206 8.9e-25 117.1 121 53.7
ClCG00G005610 Citrullus lanatus HOM05D006680 ORTHO05D008206 1.5e-24 116.3 120 53.3
SGA_v2.0_scaffold67G22622 Striga asiatica HOM05D006680 ORTHO05D008206 1.5e-24 116.3 120 53.3
Oeu063359.1 Olea europaea HOM05D006680 ORTHO05D008206 2.0e-24 115.9 120 53.3
CiPaw.01G147500 Carya illinoinensis HOM05D006680 ORTHO05D008206 7.5e-24 114.0 120 50.8
Cc03_g01760 Coffea canephora HOM05D006680 ORTHO05D008206 9.8e-24 113.6 120 50.0
MSTRG.3906 Avicennia marina HOM05D006680 ORTHO05D008206 1.3e-23 113.2 120 51.7
PGSC0003DMG400011317 Solanum tuberosum HOM05D006680 ORTHO05D008206 1.3e-23 113.2 120 50.0
Peaxi162Scf00246g00103 Petunia axillaris HOM05D006680 ORTHO05D008206 2.2e-23 112.5 117 51.3
Sabra10G0008200 Salix brachista HOM05D006680 ORTHO05D008206 2.2e-23 112.5 124 52.4
Nitab4.5_0002761g0070 Nicotiana tabacum HOM05D006680 ORTHO05D008206 2.9e-23 112.1 121 51.2
QL06p009590 Quercus lobata HOM05D006680 ORTHO05D008206 2.9e-23 112.1 119 50.4
CSS0014864 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 4.9e-23 111.3 121 51.2
Solyc12g099500.2 Solanum lycopersicum HOM05D006680 ORTHO05D008206 4.9e-23 111.3 113 53.1
Sopen12g034170 Solanum pennellii HOM05D006680 ORTHO05D008206 4.9e-23 111.3 113 53.1
Potri.008G221000 Populus trichocarpa HOM05D006680 ORTHO05D008206 6.4e-23 110.9 123 50.4
CSS0010580 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 8.3e-23 110.5 121 51.2
THA.LOC104818922 Tarenaya hassleriana HOM05D006680 ORTHO05D008206 8.3e-23 110.5 122 53.3
Cpa.g.sc16.184 Carica papaya HOM05D006680 ORTHO05D008206 1.1e-22 110.2 124 50.8
PGSC0003DMG400004705 Solanum tuberosum HOM05D006680 ORTHO05D008206 1.1e-22 110.2 116 51.7
Sed0015603 Sechium edule HOM05D006680 ORTHO05D008206 1.4e-22 109.8 120 51.7
Nitab4.5_0003466g0010 Nicotiana tabacum HOM05D006680 ORTHO05D008206 2.4e-22 109.0 120 50.8
Potri.010G013100 Populus trichocarpa HOM05D006680 ORTHO05D008206 2.4e-22 109.0 124 50.8
Gohir.A09G238300 Gossypium hirsutum HOM05D006680 ORTHO05D008206 4.1e-22 108.2 121 52.1
Gohir.D09G239200 Gossypium hirsutum HOM05D006680 ORTHO05D008206 4.1e-22 108.2 121 51.2
Gorai.006G261900 Gossypium raimondii HOM05D006680 ORTHO05D008206 4.1e-22 108.2 121 51.2
Peaxi162Scf00646g00027 Petunia axillaris HOM05D006680 ORTHO05D008206 4.1e-22 108.2 120 50.8
Dinv29759 Davidia involucrata HOM05D006680 ORTHO05D008206 5.4e-22 107.8 117 49.6
MD13G1167200 Malus domestica HOM05D006680 ORTHO05D008206 7.0e-22 107.5 122 48.4
Thecc.04G286300 Theobroma cacao HOM05D006680 ORTHO05D008206 7.0e-22 107.5 117 50.4
Lalb_Chr13g0303561 Lupinus albus HOM05D006680 ORTHO05D008206 9.2e-22 107.1 116 53.4
Gohir.A10G164900 Gossypium hirsutum HOM05D006680 ORTHO05D008206 2.0e-21 105.9 121 51.2
Gohir.D10G171100 Gossypium hirsutum HOM05D006680 ORTHO05D008206 2.0e-21 105.9 121 51.2
Gorai.011G191100 Gossypium raimondii HOM05D006680 ORTHO05D008206 2.0e-21 105.9 121 51.2
Lsat_1_v5_gn_6_95660 Lactuca sativa HOM05D006680 ORTHO05D008206 2.0e-21 105.9 120 50.8
Aqoxy2G02951 Aquilegia oxysepala HOM05D006680 ORTHO05D008206 2.7e-21 105.5 113 51.3
Manes.15G011600 Manihot esculenta HOM05D006680 ORTHO05D008206 2.7e-21 105.5 123 49.6
TWI09G0327 Tripterygium wilfordii HOM05D006680 ORTHO05D008206 2.7e-21 105.5 118 49.2
BraA05t22848Z Brassica rapa HOM05D006680 ORTHO05D008206 4.6e-21 104.8 113 52.2
CiPaw.02G082300 Carya illinoinensis HOM05D006680 ORTHO05D008206 4.6e-21 104.8 120 47.5
A03p34950 Brassica napus HOM05D006680 ORTHO05D008206 5.9e-21 104.4 113 53.1
C03p42530 Brassica napus HOM05D006680 ORTHO05D008206 5.9e-21 104.4 113 53.1
BolC3t16523H Brassica oleracea HOM05D006680 ORTHO05D008206 5.9e-21 104.4 113 53.1
BraA03t12675Z Brassica rapa HOM05D006680 ORTHO05D008206 5.9e-21 104.4 113 53.1
Ah.08g214570 Amaranthus hybridus HOM05D006680 ORTHO05D008206 7.8e-21 104.0 121 49.6
Nn4g25792 Nelumbo nucifera HOM05D006680 ORTHO05D008206 1.0e-20 103.6 122 48.4
Prupe.1G134500 Prunus persica HOM05D006680 ORTHO05D008206 1.0e-20 103.6 114 48.2
VMungo1215G2846 Vigna mungo HOM05D006680 ORTHO05D008206 1.3e-20 103.2 117 50.4
Duzib151G0306 Durio zibethinus HOM05D006680 ORTHO05D008206 1.7e-20 102.8 119 48.7
Manes.03G196700 Manihot esculenta HOM05D006680 ORTHO05D008206 1.7e-20 102.8 118 49.2
Sc19g0005290 Simmondsia chinensis HOM05D006680 ORTHO05D008206 1.7e-20 102.8 121 47.9
Sc19g0005370 Simmondsia chinensis HOM05D006680 ORTHO05D008206 1.7e-20 102.8 121 47.9
FvH4_4g18340 Fragaria vesca HOM05D006680 ORTHO05D008206 2.3e-20 102.4 118 48.3
FAN07G2082 Fragaria x ananassa HOM05D006680 ORTHO05D008206 3.0e-20 102.1 118 48.3
FAN12G3601 Fragaria x ananassa HOM05D006680 ORTHO05D008206 3.0e-20 102.1 118 48.3
FAN17G1034 Fragaria x ananassa HOM05D006680 ORTHO05D008206 3.0e-20 102.1 118 48.3
Duzib212G0294 Durio zibethinus HOM05D006680 ORTHO05D008206 3.9e-20 101.7 122 48.4
HanXRQChr13g0419971 Helianthus annuus HOM05D006680 ORTHO05D008206 3.9e-20 101.7 117 47.9
BcaC05g29822 Brassica carinata HOM05D006680 ORTHO05D008206 5.0e-20 101.3 114 52.6
BolC5t34701H Brassica oleracea HOM05D006680 ORTHO05D008206 5.0e-20 101.3 114 52.6
DCAR_027070 Daucus carota HOM05D006680 ORTHO05D008206 5.0e-20 101.3 116 49.1
A05p41250 Brassica napus HOM05D006680 ORTHO05D008206 6.6e-20 100.9 113 51.3
Lalb_Chr07g0177791 Lupinus albus HOM05D006680 ORTHO05D008206 6.6e-20 100.9 116 50.9
DCAR_030521 Daucus carota HOM05D006680 ORTHO05D008206 8.6e-20 100.5 116 47.4
FAN12G3976 Fragaria x ananassa HOM05D006680 ORTHO05D008206 8.6e-20 100.5 116 48.3
Hma1.2p1_1185F.1_g265000 Hydrangea macrophylla HOM05D006680 ORTHO05D008206 8.6e-20 100.5 120 48.3
TAR370G0002 Trochodendron aralioides HOM05D006680 ORTHO05D008206 3.3e-19 98.6 116 50.0
Ca_21488_v3 Cicer arietinum L. HOM05D006680 ORTHO05D008206 4.3e-19 98.2 117 49.6
RcHm_v2.0_Chr4g0422811 Rosa chinensis HOM05D006680 ORTHO05D008206 4.3e-19 98.2 118 46.6
AUR62040379 Chenopodium quinoa HOM05D006680 ORTHO05D008206 5.6e-19 97.8 121 47.1
DCAR_002469 Daucus carota HOM05D006680 ORTHO05D008206 9.5e-19 97.1 118 45.8
ECA240G4018 Erigeron canadensis HOM05D006680 ORTHO05D008206 1.6e-18 96.3 111 46.8
CAN.G484.39 Capsicum annuum HOM05D006680 ORTHO05D008206 3.6e-18 95.1 118 46.6
Thhalv10021931m.g Eutrema salsugineum HOM05D006680 ORTHO05D008206 1.1e-17 93.6 100 54.0
Glyma.07G246700 Glycine max HOM05D006680 ORTHO05D008206 1.4e-17 93.2 116 47.4
MBI19_g25353_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 1.8e-17 92.8 116 45.7
Sabra10G0008300 Salix brachista HOM05D006680 ORTHO05D008206 1.8e-17 92.8 123 47.2
Nn3g21479 Nelumbo nucifera HOM05D006680 ORTHO05D008206 5.2e-17 91.3 95 53.7
Phvul.003G097003 Phaseolus vulgaris HOM05D006680 ORTHO05D008206 6.8e-17 90.9 89 62.9
PGR031G3343 Punica granatum HOM05D006680 ORTHO05D008206 6.8e-17 90.9 122 46.7
Lj4g0016566 Lotus japonicus HOM05D006680 ORTHO05D008206 2.6e-16 89.0 89 56.2
Medtr4g120020 Medicago truncatula HOM05D006680 ORTHO05D008206 4.4e-16 88.2 104 48.1
Sp3g05850 Schrenkiella parvula HOM05D006680 ORTHO05D008206 4.4e-16 88.2 96 52.1
Carub.0003s0642 Capsella rubella HOM05D006680 ORTHO05D008206 5.8e-16 87.8 98 52.0
Psat4g026840 Pisum sativum HOM05D006680 ORTHO05D008206 7.5e-16 87.4 96 53.1
TPR.G3164 Trifolium pratense HOM05D006680 ORTHO05D008206 7.5e-16 87.4 89 53.9
AT3G06890 Arabidopsis thaliana HOM05D006680 ORTHO05D008206 1.3e-15 86.7 100 51.0
CARHR081510 Cardamine hirsuta HOM05D006680 ORTHO05D008206 1.3e-15 86.7 98 52.0
AL3G18020 Arabidopsis lyrata HOM05D006680 ORTHO05D008206 1.7e-15 86.3 100 51.0
CANSAT78G1139 Cannabis sativa HOM05D006680 ORTHO05D008206 2.2e-15 85.9 96 51.0
HanXRQChr03g0089341 Helianthus annuus HOM05D006680 ORTHO05D008206 6.4e-15 84.3 113 41.6
Os03g0343800 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 1.1e-14 83.6 110 45.5
PGR004G0310 Punica granatum HOM05D006680 ORTHO05D008206 5.4e-14 81.3 122 41.8
Zm00001eb124100 Zea mays HOM05D006680 ORTHO05D008206 5.4e-14 81.3 108 45.4
Zm00001eb016470 Zea mays HOM05D006680 ORTHO05D008206 2.7e-13 79.0 110 50.0
PSO210G6323 Papaver somniferum HOM05D006680 ORTHO05D008206 4.6e-13 78.2 114 43.0
MBI18_g06870_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 6.0e-13 77.8 112 43.8
PSO832G1781 Papaver somniferum HOM05D006680 ORTHO05D008206 7.8e-13 77.4 114 42.1
HPP92_000110 Vanilla planifolia HOM05D006680 ORTHO05D008206 7.8e-13 77.4 112 46.4
Zm00001eb394930 Zea mays HOM05D006680 ORTHO05D008206 3.0e-12 75.5 89 48.3
Thecc.09G272700 Theobroma cacao HOM05D006680 ORTHO05D008206 1.9e-11 72.8 75 53.3
Thecc.05G268700 Theobroma cacao HOM05D006680 ORTHO05D008206 2.5e-11 72.4 93 47.3
MD16G1168200 Malus domestica HOM05D006680 ORTHO05D008206 1.2e-10 70.1 115 40.0
PSO170G5007 Papaver somniferum HOM05D006680 ORTHO05D008206 1.1e-09 67.0 96 42.7
ATR0796G044 Amborella trichopoda HOM05D006680 ORTHO05D008206 1.4e-09 66.6 110 39.1
PSO017G4993 Papaver somniferum HOM05D006680 ORTHO05D008206 2.3e-09 65.9 96 41.7
Eucgr.H03932 Eucalyptus grandis HOM05D006680 ORTHO05D008206 1.2e-08 63.5 116 37.9
Rhsim04G0223700 Rhododendron simsii HOM05D006680 ORTHO05D008206 2.0e-08 62.8 89 39.3
Rhsim09G0007300 Rhododendron simsii HOM05D006680 ORTHO05D008206 2.0e-08 62.8 89 39.3
SalBow5G0837 Salvia bowleyana HOM05D006680 ORTHO05D008206 2.6e-08 62.4 70 51.4
MELO3C006671.2 Cucumis melo HOM05D006680 ORTHO05D008206 8.3e-07 57.4 52 51.9


User provided reference genes

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