Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 3.1e-300 1034.2 490 100.0
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 4.6e-203 711.4 385 87.5
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 6.9e-199 697.6 392 85.2
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 7.9e-195 684.1 386 84.5
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 1.0e-194 683.7 386 83.2
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 8.7e-194 680.6 384 84.1
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 1.9e-193 679.5 386 82.1
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 5.7e-193 677.9 385 83.1
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 1.3e-192 676.8 385 82.6
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.1e-192 676.0 386 83.7
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 3.7e-192 675.2 386 83.2
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 6.2e-192 674.5 385 83.1
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 6.2e-192 674.5 397 82.9
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 1.1e-191 673.7 386 83.4
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 4.0e-191 671.8 385 83.6
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 4.0e-191 671.8 386 82.9
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 5.3e-191 671.4 386 82.9
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 6.9e-191 671.0 385 82.1
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 2.6e-190 669.1 386 82.1
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 4.5e-190 668.3 385 83.4
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 5.8e-190 667.9 386 81.9
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 7.6e-190 667.5 385 81.3
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 1.0e-189 667.2 385 82.1
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.7e-189 666.4 402 78.6
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 2.9e-189 665.6 397 81.4
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 3.8e-189 665.2 388 81.7
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 8.4e-189 664.1 382 81.7
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.1e-188 663.7 385 82.6
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 1.1e-188 663.7 384 82.8
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 1.4e-188 663.3 388 82.0
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 1.9e-188 662.9 387 81.4
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.9e-188 662.9 385 82.3
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 1.9e-188 662.9 385 82.3
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 1.9e-188 662.9 388 82.0
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 2.5e-188 662.5 385 81.6
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 3.2e-188 662.1 374 83.7
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 5.5e-188 661.4 387 80.9
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 5.5e-188 661.4 385 81.6
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 9.3e-188 660.6 385 81.0
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 3.5e-187 658.7 387 80.4
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 3.5e-187 658.7 449 72.2
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 4.6e-187 658.3 386 81.1
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 1.0e-186 657.1 388 81.7
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 1.0e-186 657.1 385 81.0
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 1.0e-186 657.1 373 83.6
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 1.3e-186 656.8 385 81.6
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 1.3e-186 656.8 386 82.1
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 3.0e-186 655.6 384 80.2
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 3.0e-186 655.6 387 80.4
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 3.9e-186 655.2 384 81.0
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 3.9e-186 655.2 384 81.2
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 3.9e-186 655.2 387 80.4
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 1.9e-185 652.9 387 79.8
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 1.9e-185 652.9 387 79.8
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 3.3e-185 652.1 387 78.8
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 3.3e-185 652.1 387 78.6
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 5.7e-185 651.4 386 80.8
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 7.4e-185 651.0 460 70.7
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 7.4e-185 651.0 392 79.8
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 1.3e-184 650.2 387 80.4
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 1.8e-183 646.4 384 81.2
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 3.1e-183 645.6 385 78.7
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 3.1e-183 645.6 374 81.3
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 5.3e-183 644.8 399 78.2
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 5.3e-183 644.8 392 78.6
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 6.9e-183 644.4 380 80.0
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 7.7e-182 641.0 396 75.0
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 7.7e-182 641.0 385 78.7
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 2.2e-181 639.4 373 82.3
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 5.0e-181 638.3 396 75.3
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 8.5e-181 637.5 416 75.0
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 1.1e-180 637.1 386 78.8
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.5e-180 636.0 390 79.0
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 4.2e-180 635.2 396 74.7
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 7.2e-180 634.4 385 77.4
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 9.4e-180 634.0 396 74.7
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 1.2e-179 633.6 390 78.7
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 1.2e-179 633.6 374 79.7
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 2.1e-179 632.9 385 76.4
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 2.1e-179 632.9 385 76.4
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 3.6e-179 632.1 416 73.1
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 7.9e-179 630.9 396 75.3
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 2.3e-178 629.4 418 72.7
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.3e-176 623.6 385 77.1
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 1.3e-176 623.6 382 78.0
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 2.2e-176 622.9 385 75.8
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.2e-176 622.9 385 76.9
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 2.2e-176 622.9 398 74.4
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 2.8e-176 622.5 389 75.1
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.1e-175 620.5 385 76.6
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 1.4e-175 620.2 385 75.6
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 3.4e-174 615.5 396 73.0
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 1.7e-173 613.2 388 76.5
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 1.7e-173 613.2 411 71.8
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 1.9e-172 609.8 408 71.6
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 1.2e-171 607.1 396 73.5
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 1.6e-171 606.7 386 76.2
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 1.4e-170 603.6 396 72.2
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 3.0e-170 602.4 396 72.0
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 4.4e-169 598.6 396 71.5
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 2.6e-166 589.3 373 74.0
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 6.5e-165 584.7 386 73.8
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 1.2e-163 580.5 345 78.8
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 5.2e-162 575.1 394 72.6
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 1.7e-157 560.1 382 71.2
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 3.2e-156 555.8 385 72.5
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 5.5e-156 555.1 354 73.7
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 1.4e-154 550.4 385 70.6
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 3.2e-148 529.3 379 65.4
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 5.2e-146 521.9 382 66.5
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 2.0e-145 520.0 311 79.1
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 2.0e-145 520.0 378 65.3
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 4.1e-143 512.3 378 64.8
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 1.5e-140 503.8 288 83.7
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 9.8e-137 491.1 289 82.4
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 5.2e-130 468.8 328 68.3
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 2.0e-129 466.8 292 77.4
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 1.3e-128 464.2 382 61.0
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 9.2e-127 458.0 380 58.9
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 3.2e-103 379.8 286 63.3
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 2.2e-96 357.1 225 77.3
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 3.1e-82 310.1 191 77.5
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 3.4e-81 306.6 238 66.8
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 7.6e-81 305.4 159 85.5
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 3.8e-80 303.1 190 78.4
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 6.7e-77 292.4 245 60.0
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 4.2e-71 273.1 147 83.7
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 3.7e-67 260.0 166 74.7
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.5e-65 254.6 354 44.9
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 2.0e-65 254.2 459 35.5
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 3.0e-45 187.2 190 54.2
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 1.1e-44 185.3 111 76.6
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 4.1e-42 176.8 136 61.0
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.6e-30 138.3 72 84.7
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 1.2e-12 79.0 279 26.5
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 2.0e-12 78.2 209 32.5
COL.COLO4_32114 Corchorus olitorius HOM05D000931 ORTHO05D002226 2.8e-06 57.8 51 52.9


User provided reference genes

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