Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11813 Utricularia gibba HOM05D004657 ORTHO05D005562 1.8e-205 719.2 389 100.0
unitig_748.g8654 Utricularia gibba HOM05D004657 ORTHO05D005562 1.0e-152 543.9 396 77.0
MSTRG.3785 Avicennia marina HOM05D004657 ORTHO05D005562 6.9e-93 345.1 351 58.7
Hma1.2p1_0308F.1_g120150 Hydrangea macrophylla HOM05D004657 ORTHO05D005562 1.6e-89 334.0 400 53.8
Gorai.003G038700 Gossypium raimondii HOM05D004657 ORTHO05D005562 1.0e-88 331.3 300 58.7
Migut.L00115 Erythranthe guttata HOM05D004657 ORTHO05D005562 2.3e-88 330.1 328 58.5
Gohir.D03G036900 Gossypium hirsutum HOM05D004657 ORTHO05D005562 3.0e-88 329.7 300 58.7
Hma1.2p1_0047F.1_g027890 Hydrangea macrophylla HOM05D004657 ORTHO05D005562 6.7e-88 328.6 322 58.1
SGA_v2.0_scaffold47G17783 Striga asiatica HOM05D004657 ORTHO05D005562 6.7e-88 328.6 382 53.1
Ciclev10027598m.g Citrus clementina HOM05D004657 ORTHO05D005562 8.7e-88 328.2 236 68.6
Eucgr.I00428 Eucalyptus grandis HOM05D004657 ORTHO05D005562 8.7e-88 328.2 298 59.4
PGR004G1209 Punica granatum HOM05D004657 ORTHO05D005562 8.7e-88 328.2 427 50.4
Gohir.A02G143600 Gossypium hirsutum HOM05D004657 ORTHO05D005562 2.5e-87 326.6 300 58.3
COL.COLO4_09954 Corchorus olitorius HOM05D004657 ORTHO05D005562 5.7e-87 325.5 254 65.7
Cc00_g16220 Coffea canephora HOM05D004657 ORTHO05D005562 7.4e-87 325.1 231 69.3
MSTRG.23340 Avicennia marina HOM05D004657 ORTHO05D005562 2.8e-86 323.2 353 54.1
Manes.12G135900 Manihot esculenta HOM05D004657 ORTHO05D005562 3.7e-86 322.8 298 58.7
Thecc.01G102700 Theobroma cacao HOM05D004657 ORTHO05D005562 4.8e-86 322.4 288 59.4
VMungo1383G1250 Vigna mungo HOM05D004657 ORTHO05D005562 4.8e-86 322.4 422 49.3
Cpa.g.sc621.1 Carica papaya HOM05D004657 ORTHO05D005562 1.1e-85 321.2 322 58.4
Lj6g0008145 Lotus japonicus HOM05D004657 ORTHO05D005562 1.4e-85 320.9 421 48.5
Glyma.11G239700 Glycine max HOM05D004657 ORTHO05D005562 9.0e-85 318.2 317 56.5
Duzib147G0720 Durio zibethinus HOM05D004657 ORTHO05D005562 1.2e-84 317.8 267 62.2
Thhalv10026765m.g Eutrema salsugineum HOM05D004657 ORTHO05D005562 1.5e-84 317.4 259 63.7
MELO3C007762.2 Cucumis melo HOM05D004657 ORTHO05D005562 2.0e-84 317.0 408 49.0
Lsat_1_v5_gn_4_142741 Lactuca sativa HOM05D004657 ORTHO05D005562 2.0e-84 317.0 265 63.0
Prupe.6G184700 Prunus persica HOM05D004657 ORTHO05D005562 4.5e-84 315.8 317 55.2
Duzib264G0234 Durio zibethinus HOM05D004657 ORTHO05D005562 7.6e-84 315.1 249 63.5
AT4G39840 Arabidopsis thaliana HOM05D004657 ORTHO05D005562 1.0e-83 314.7 255 62.7
CANSAT01G2418 Cannabis sativa HOM05D004657 ORTHO05D005562 1.0e-83 314.7 337 54.3
Rhsim10G0161200 Rhododendron simsii HOM05D004657 ORTHO05D005562 1.7e-83 313.9 349 54.2
SGA_v2.0_scaffold34G13594 Striga asiatica HOM05D004657 ORTHO05D005562 1.7e-83 313.9 391 50.4
Potri.007G091900 Populus trichocarpa HOM05D004657 ORTHO05D005562 2.2e-83 313.5 296 58.1
DCAR_014230 Daucus carota HOM05D004657 ORTHO05D005562 5.0e-83 312.4 413 47.9
AL7G12070 Arabidopsis lyrata HOM05D004657 ORTHO05D005562 6.5e-83 312.0 254 62.6
HanXRQChr17g0543271 Helianthus annuus HOM05D004657 ORTHO05D005562 6.5e-83 312.0 434 47.0
Haze_24945 Corylus avellana HOM05D004657 ORTHO05D005562 8.4e-83 311.6 254 63.4
Sp7g36050 Schrenkiella parvula HOM05D004657 ORTHO05D005562 8.4e-83 311.6 254 63.0
A01p00750 Brassica napus HOM05D004657 ORTHO05D005562 1.1e-82 311.2 254 62.2
BraA01t00078Z Brassica rapa HOM05D004657 ORTHO05D005562 1.1e-82 311.2 254 62.2
TAR381G0611 Trochodendron aralioides HOM05D004657 ORTHO05D005562 1.1e-82 311.2 343 53.4
Carub.0007s0176 Capsella rubella HOM05D004657 ORTHO05D005562 1.4e-82 310.8 251 62.5
Manes.13G075300 Manihot esculenta HOM05D004657 ORTHO05D005562 1.9e-82 310.5 286 57.3
MSTRG.2565 Avicennia marina HOM05D004657 ORTHO05D005562 2.5e-82 310.1 451 46.3
BolC1t00087H Brassica oleracea HOM05D004657 ORTHO05D005562 3.2e-82 309.7 238 63.9
Peaxi162Scf00805g00021 Petunia axillaris HOM05D004657 ORTHO05D005562 3.2e-82 309.7 344 52.6
CARHR246860 Cardamine hirsuta HOM05D004657 ORTHO05D005562 4.2e-82 309.3 238 64.3
ClCG01G018830 Citrullus lanatus HOM05D004657 ORTHO05D005562 4.2e-82 309.3 402 48.8
PGSC0003DMG400001895 Solanum tuberosum HOM05D004657 ORTHO05D005562 4.2e-82 309.3 424 47.2
BcaNung00905 Brassica carinata HOM05D004657 ORTHO05D005562 5.5e-82 308.9 254 61.8
C01p00860 Brassica napus HOM05D004657 ORTHO05D005562 5.5e-82 308.9 254 61.8
THA.LOC104807698 Tarenaya hassleriana HOM05D004657 ORTHO05D005562 5.5e-82 308.9 251 64.5
TAR625G0843 Trochodendron aralioides HOM05D004657 ORTHO05D005562 5.5e-82 308.9 237 65.4
Sabra05G0063000 Salix brachista HOM05D004657 ORTHO05D005562 1.6e-81 307.4 246 64.6
RcHm_v2.0_Chr2g0114541 Rosa chinensis HOM05D004657 ORTHO05D005562 2.1e-81 307.0 237 64.1
Sabra07G0075500 Salix brachista HOM05D004657 ORTHO05D005562 2.7e-81 306.6 258 62.4
BcaNung05325 Brassica carinata HOM05D004657 ORTHO05D005562 3.5e-81 306.2 255 62.0
C03p78370 Brassica napus HOM05D004657 ORTHO05D005562 4.6e-81 305.8 255 62.0
CiPaw.04G098700 Carya illinoinensis HOM05D004657 ORTHO05D005562 4.6e-81 305.8 346 51.4
Glyma.18G017700 Glycine max HOM05D004657 ORTHO05D005562 6.1e-81 305.4 283 57.6
BolC3t20095H Brassica oleracea HOM05D004657 ORTHO05D005562 7.9e-81 305.1 255 61.6
Cfa002676 Carpinus fangiana HOM05D004657 ORTHO05D005562 7.9e-81 305.1 330 53.3
Potri.005G076500 Populus trichocarpa HOM05D004657 ORTHO05D005562 7.9e-81 305.1 297 57.2
Aa31LG6G15430 Aethionema arabicum HOM05D004657 ORTHO05D005562 1.0e-80 304.7 294 56.1
TWI53G1309 Tripterygium wilfordii HOM05D004657 ORTHO05D005562 1.0e-80 304.7 302 56.6
Lj2P550T25 Lonicera japonica HOM05D004657 ORTHO05D005562 1.3e-80 304.3 247 64.4
MD15G1325300 Malus domestica HOM05D004657 ORTHO05D005562 1.3e-80 304.3 246 62.2
Gohir.D11G222100 Gossypium hirsutum HOM05D004657 ORTHO05D005562 1.8e-80 303.9 405 46.9
TWI77G0153 Tripterygium wilfordii HOM05D004657 ORTHO05D005562 1.8e-80 303.9 237 66.2
arahy.Tifrunner.gnm1.ann1.4BU7T8 Arachis hypogaea HOM05D004657 ORTHO05D005562 3.9e-80 302.8 317 53.6
arahy.Tifrunner.gnm1.ann1.Q2VPH2 Arachis hypogaea HOM05D004657 ORTHO05D005562 5.1e-80 302.4 315 54.0
Glyma.08G136600 Glycine max HOM05D004657 ORTHO05D005562 8.7e-80 301.6 427 46.6
FAN23G0181 Fragaria x ananassa HOM05D004657 ORTHO05D005562 1.1e-79 301.2 237 63.7
A08p23310 Brassica napus HOM05D004657 ORTHO05D005562 1.5e-79 300.8 249 61.8
BraA08t34286Z Brassica rapa HOM05D004657 ORTHO05D005562 1.5e-79 300.8 249 61.8
FAN19G1231 Fragaria x ananassa HOM05D004657 ORTHO05D005562 1.5e-79 300.8 402 46.8
Solyc03g078640.1 Solanum lycopersicum HOM05D004657 ORTHO05D005562 1.5e-79 300.8 250 63.2
Sopen03g021540 Solanum pennellii HOM05D004657 ORTHO05D005562 1.5e-79 300.8 250 63.2
FAN28G0529 Fragaria x ananassa HOM05D004657 ORTHO05D005562 4.3e-79 299.3 408 46.1
Gorai.007G239400 Gossypium raimondii HOM05D004657 ORTHO05D005562 4.3e-79 299.3 401 46.9
CsaV3_6G045490 Cucumis sativus L. HOM05D004657 ORTHO05D005562 5.7e-79 298.9 407 46.2
Gohir.A11G200900 Gossypium hirsutum HOM05D004657 ORTHO05D005562 5.7e-79 298.9 406 45.6
Medtr3g087360 Medicago truncatula HOM05D004657 ORTHO05D005562 5.7e-79 298.9 408 45.3
CiPaw.03G141100 Carya illinoinensis HOM05D004657 ORTHO05D005562 7.4e-79 298.5 346 50.9
Atru.chr4.84 Acer truncatum HOM05D004657 ORTHO05D005562 9.7e-79 298.1 295 56.6
Lalb_Chr07g0185151 Lupinus albus HOM05D004657 ORTHO05D005562 1.3e-78 297.7 364 50.3
Psat5g089640 Pisum sativum HOM05D004657 ORTHO05D005562 1.6e-78 297.4 378 48.7
PGSC0003DMG400023187 Solanum tuberosum HOM05D004657 ORTHO05D005562 1.6e-78 297.4 253 62.8
QL06p049779 Quercus lobata HOM05D004657 ORTHO05D005562 2.8e-78 296.6 327 51.1
THA.LOC104824872 Tarenaya hassleriana HOM05D004657 ORTHO05D005562 3.7e-78 296.2 254 59.8
FAN26G2002 Fragaria x ananassa HOM05D004657 ORTHO05D005562 4.8e-78 295.8 403 45.7
Phvul.001G251700 Phaseolus vulgaris HOM05D004657 ORTHO05D005562 4.8e-78 295.8 241 62.7
CAN.G480.1 Capsicum annuum HOM05D004657 ORTHO05D005562 6.3e-78 295.4 260 62.3
Nitab4.5_0000897g0030 Nicotiana tabacum HOM05D004657 ORTHO05D005562 6.3e-78 295.4 262 61.1
Sopen04g024940 Solanum pennellii HOM05D004657 ORTHO05D005562 6.3e-78 295.4 333 52.6
Lj4g0007261 Lotus japonicus HOM05D004657 ORTHO05D005562 8.2e-78 295.0 298 56.4
VMungo0251G2127 Vigna mungo HOM05D004657 ORTHO05D005562 8.2e-78 295.0 331 51.1
Nitab4.5_0000004g0340 Nicotiana tabacum HOM05D004657 ORTHO05D005562 1.1e-77 294.7 266 60.5
Sed0024330 Sechium edule HOM05D004657 ORTHO05D005562 1.1e-77 294.7 401 46.1
Phvul.002G255300 Phaseolus vulgaris HOM05D004657 ORTHO05D005562 1.8e-77 293.9 316 52.5
SalBow3G2946 Salvia bowleyana HOM05D004657 ORTHO05D005562 1.8e-77 293.9 213 70.4
Lsat_1_v5_gn_5_43821 Lactuca sativa HOM05D004657 ORTHO05D005562 4.1e-77 292.7 325 52.6
Solyc04g055090.1 Solanum lycopersicum HOM05D004657 ORTHO05D005562 6.9e-77 292.0 350 50.0
Medtr8g090265 Medicago truncatula HOM05D004657 ORTHO05D005562 9.0e-77 291.6 329 51.4
PSO541G4803 Papaver somniferum HOM05D004657 ORTHO05D005562 1.0e-75 288.1 253 58.9
CSS0006663 Camellia sinensis var. sinensis HOM05D004657 ORTHO05D005562 1.3e-75 287.7 428 44.4
Psat7g054320 Pisum sativum HOM05D004657 ORTHO05D005562 2.2e-75 287.0 230 60.9
Aqoxy6G00812 Aquilegia oxysepala HOM05D004657 ORTHO05D005562 3.8e-75 286.2 376 48.7
DCAR_011511 Daucus carota HOM05D004657 ORTHO05D005562 6.5e-75 285.4 248 60.9
unitig_88.g27724 Utricularia gibba HOM05D004657 ORTHO05D005562 8.5e-75 285.0 271 57.2
PSO781G0272 Papaver somniferum HOM05D004657 ORTHO05D005562 2.5e-74 283.5 326 51.2
TPR.G6250 Trifolium pratense HOM05D004657 ORTHO05D005562 1.4e-72 277.7 231 59.3
Sc16g0005630 Simmondsia chinensis HOM05D004657 ORTHO05D005562 3.0e-72 276.6 237 57.4
Glyma.05G179100 Glycine max HOM05D004657 ORTHO05D005562 4.1e-69 266.2 233 58.4
MBI02_g08733_MAGBIO Magnolia biondii HOM05D004657 ORTHO05D005562 6.5e-67 258.8 298 49.0
DCAR_001485 Daucus carota HOM05D004657 ORTHO05D005562 2.1e-65 253.8 295 47.5
Lj4g0017498 Lotus japonicus HOM05D004657 ORTHO05D005562 8.8e-64 248.4 272 52.9
SHI11535 Sapria himalayana HOM05D004657 ORTHO05D000023 1.7e-54 217.6 307 42.7
HPP92_016347 Vanilla planifolia HOM05D004657 ORTHO05D008789 8.8e-48 195.3 303 40.6
Os08g0411300 Oryza sativa ssp. japonica HOM05D004657 ORTHO05D005562 6.5e-43 179.1 238 42.9
SEGI_28024 Sequoiadendron giganteum HOM05D004657 ORTHO05D005562 7.2e-42 175.6 252 36.9
ATR0564G070 Amborella trichopoda HOM05D004657 ORTHO05D005562 9.4e-42 175.3 240 41.2
Zm00001eb001010 Zea mays HOM05D004657 ORTHO05D005562 3.4e-39 166.8 311 35.7
Mapoly0036s0106 Marchantia polymorpha HOM05D004657 ORTHO05D005562 3.7e-38 163.3 248 37.1
Actinidia36592 Actinidia chinensis HOM05D004657 ORTHO05D005562 9.1e-37 158.7 112 67.9
SMO012G0039 Selaginella moellendorffii HOM05D004657 ORTHO05D005562 8.6e-35 152.1 246 37.0
AagrBONN_evm.TU.Sc2ySwM_368.2671 Anthoceros agrestis HOM05D004657 ORTHO05D005562 3.6e-33 146.7 243 37.0
CDE12G0473 Ceratophyllum demersum HOM05D001805 ORTHO05D001734 4.4e-31 139.8 146 51.4
Pp3c8_17900 Physcomitrium patens HOM05D004657 ORTHO05D005562 1.8e-29 134.4 218 33.9
Nitab4.5_0000104g0160 Nicotiana tabacum HOM05D004657 ORTHO05D005562 5.4e-29 132.9 290 31.7
TPR.G17843 Trifolium pratense HOM05D004657 ORTHO05D005562 6.6e-27 125.9 89 64.0
Pp3c24_14210 Physcomitrium patens HOM05D004657 ORTHO05D005562 1.2e-25 121.7 366 28.1
Zm00001eb119110 Zea mays HOM05D004657 ORTHO05D005562 1.0e-24 118.6 215 35.8
CBR_g57642 Chara braunii HOM05D004657 ORTHO05D005562 6.4e-22 109.4 211 29.4
CBR_g45841 Chara braunii HOM05D004657 ORTHO05D005562 7.0e-21 105.9 255 27.5
Zm00001eb168110 Zea mays HOM05D004657 ORTHO05D005562 9.2e-21 105.5 208 34.6
Zm00001eb272140 Zea mays HOM05D004657 ORTHO05D005562 7.3e-18 95.9 160 36.9
Oeu054841.2 Olea europaea HOM05D004657 ORTHO05D005562 3.6e-17 93.6 253 34.0
MD01G1028100 Malus domestica HOM05D004657 ORTHO05D005562 4.9e-14 83.2 172 34.3
Zm00001eb295260 Zea mays HOM05D004657 ORTHO05D005562 4.6e-12 76.6 155 34.8
Oeu002176.1 Olea europaea HOM05D004657 ORTHO05D005562 3.3e-10 70.5 43 65.1
Zm00001eb342160 Zea mays HOM05D004657 ORTHO05D005562 3.3e-10 70.5 185 31.4
Zm00001eb024090 Zea mays HOM05D004657 ORTHO05D005562 2.1e-09 67.8 108 40.7
Zm00001eb008600 Zea mays HOM05D004657 ORTHO05D005562 1.8e-08 64.7 199 28.1
Zm00001eb030060 Zea mays HOM05D004657 ORTHO05D005562 8.9e-08 62.4 105 36.2
Zm00001eb332070 Zea mays HOM05D004657 ORTHO05D005562 1.5e-07 61.6 56 44.6
CDE04G1361 Ceratophyllum demersum HOM05D001805 ORTHO05D001734 5.8e-07 59.7 72 38.9
Zm00001eb210920 Zea mays HOM05D004657 ORTHO05D005562 7.6e-07 59.3 184 29.9
Zm00001eb310250 Zea mays HOM05D004657 ORTHO05D005562 2.9e-06 57.4 135 30.4
MCO08G346 Micromonas commoda HOM05D004657 ORTHO05D005562 4.9e-06 56.6 126 27.8
Sed0008262 Sechium edule HOM05D004657 ORTHO05D005562 4.9e-06 56.6 114 34.2


User provided reference genes

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