Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 0.0e+00 1354.3 685 100.0
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 5.6e-231 804.7 685 61.5
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 1.8e-229 799.7 675 62.8
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 1.2e-201 707.2 684 55.7
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 1.0e-200 704.1 668 56.3
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 6.7e-200 701.4 698 54.7
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 1.1e-199 700.7 689 54.4
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 3.3e-199 699.1 684 55.4
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 7.4e-199 698.0 682 56.3
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 1.6e-198 696.8 682 55.4
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 1.8e-197 693.3 683 55.1
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 5.3e-197 691.8 675 55.3
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 6.9e-197 691.4 680 55.9
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 2.0e-196 689.9 675 54.4
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 3.4e-196 689.1 659 55.4
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 1.3e-195 687.2 699 53.8
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 1.3e-195 687.2 673 54.7
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 1.3e-195 687.2 671 55.6
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 6.5e-195 684.9 672 55.2
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 8.4e-195 684.5 679 55.5
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 8.4e-195 684.5 685 54.7
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 4.2e-194 682.2 681 53.6
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 1.6e-193 680.2 685 54.3
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 2.7e-193 679.5 682 53.4
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 6.0e-193 678.3 664 54.5
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 1.0e-192 677.6 670 55.4
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 8.7e-192 674.5 684 54.4
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 1.1e-191 674.1 687 53.1
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 1.9e-191 673.3 676 55.0
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 1.9e-191 673.3 660 52.4
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 2.5e-191 672.9 682 53.2
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 2.5e-191 672.9 674 55.8
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 3.3e-191 672.5 676 53.8
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 1.3e-190 670.6 681 54.0
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 8.2e-190 667.9 670 53.0
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 1.4e-189 667.2 677 53.5
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 4.1e-189 665.6 675 52.4
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 5.3e-189 665.2 686 53.4
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 6.9e-189 664.8 681 52.9
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 2.0e-188 663.3 686 53.1
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 5.9e-188 661.8 707 51.9
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 7.7e-188 661.4 674 53.3
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 7.7e-188 661.4 674 54.5
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 2.2e-187 659.8 679 51.8
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 3.8e-187 659.1 700 52.6
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 8.5e-187 657.9 686 52.2
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 1.1e-186 657.5 685 52.6
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 1.1e-186 657.5 684 52.3
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 2.5e-186 656.4 684 52.3
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 5.5e-186 655.2 675 51.7
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 5.5e-186 655.2 675 51.4
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 3.6e-185 652.5 657 53.7
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 3.6e-185 652.5 686 53.4
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 1.8e-184 650.2 673 51.7
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 1.8e-184 650.2 675 51.6
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 3.0e-184 649.4 683 52.3
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 3.9e-184 649.0 668 53.0
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 6.7e-184 648.3 665 53.1
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 6.7e-184 648.3 683 52.1
FAN19G1851 Fragaria x ananassa HOM05D005709 ORTHO05D006306 1.5e-183 647.1 644 55.3
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 2.0e-183 646.7 671 52.0
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 2.2e-182 643.3 684 50.6
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 3.7e-182 642.5 677 51.1
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 1.1e-181 641.0 677 51.1
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 1.1e-181 641.0 683 51.5
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 3.1e-181 639.4 684 50.9
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 3.1e-181 639.4 684 50.9
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 3.1e-181 639.4 710 50.8
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 4.1e-181 639.0 684 51.2
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 5.3e-181 638.6 673 52.6
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 2.0e-180 636.7 684 51.8
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 1.7e-179 633.6 658 51.5
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 3.8e-179 632.5 679 49.8
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 1.8e-176 623.6 691 50.1
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 3.3e-175 619.4 691 49.8
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 2.2e-174 616.7 667 49.8
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 8.2e-174 614.8 668 49.7
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 1.4e-173 614.0 668 50.0
GSVIVG01007131001 Vitis vinifera HOM05D005709 ORTHO05D006306 2.9e-171 606.3 486 63.0
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 1.5e-167 594.0 639 50.7
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 1.5e-167 594.0 668 48.7
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 1.2e-164 584.3 688 48.3
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 3.5e-164 582.8 607 53.5
Phvul.002G146800 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 1.0e-163 581.3 565 53.3
Sc03g0000380 Simmondsia chinensis HOM05D005709 ORTHO05D006306 1.7e-163 580.5 484 61.0
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 7.2e-162 575.1 596 53.9
Lsat_1_v5_gn_2_70300 Lactuca sativa HOM05D005709 ORTHO05D006306 6.1e-161 572.0 505 58.0
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 2.6e-159 566.6 687 47.7
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 1.1e-157 561.2 682 46.0
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 2.5e-154 550.1 575 54.6
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 1.4e-152 544.3 710 44.9
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 7.5e-151 538.5 562 51.6
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 1.6e-148 530.8 671 45.8
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 1.1e-146 524.6 718 43.9
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 3.9e-131 473.0 570 48.2
THA.LOC104809180 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 6.2e-129 465.7 512 52.0
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 6.2e-129 465.7 622 44.7
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 1.6e-121 441.0 665 41.1
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 1.6e-113 414.5 707 37.3
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 1.3e-110 404.8 481 48.2
Medtr4g125890 Medicago truncatula HOM05D005709 ORTHO05D006306 3.5e-108 396.7 558 43.7
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 7.3e-106 389.0 756 34.7
TPR.G36816 Trifolium pratense HOM05D005709 ORTHO05D006306 4.3e-90 336.7 286 59.1
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 2.6e-87 327.4 665 35.2
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 4.5e-87 326.6 599 37.7
Dinv13596 Davidia involucrata HOM05D005709 ORTHO05D006306 2.2e-86 324.3 342 51.2
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 2.0e-79 301.2 417 47.0
CBR_g78875 Chara braunii HOM05D005709 ORTHO05D006306 5.8e-79 299.7 492 38.4
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 3.8e-78 297.0 438 45.0
MBI16_g19593_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 3.2e-77 293.9 367 48.0
Oeu002141.1 Olea europaea HOM05D005709 ORTHO05D006306 2.1e-76 291.2 319 53.6
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 1.1e-66 258.8 319 49.5
HPP92_015330 Vanilla planifolia HOM05D005709 ORTHO05D006306 2.6e-63 247.7 346 43.6
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 5.5e-61 240.0 205 62.9
BcaC01g02778 Brassica carinata HOM05D005709 ORTHO05D006306 3.3e-58 230.7 173 64.2
Oeu031122.1 Olea europaea HOM05D005709 ORTHO05D006306 2.6e-55 221.1 200 60.0
TPR.G36731 Trifolium pratense HOM05D005709 ORTHO05D006306 4.5e-55 220.3 321 42.7
PSO210G2291 Papaver somniferum HOM05D005709 ORTHO05D006306 1.3e-54 218.8 377 39.5
TAR381G1451 Trochodendron aralioides HOM05D005709 ORTHO05D006306 3.0e-51 207.6 150 66.0
THA.LOC104821549 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 9.8e-42 176.0 157 58.0
Sed0017677 Sechium edule HOM05D005709 ORTHO05D006306 2.7e-39 167.9 407 33.9
Cre03.g145707 Chlamydomonas reinhardtii HOM05D005709 ORTHO05D006306 5.9e-39 166.8 371 31.8
BcaC01g02779 Brassica carinata HOM05D005709 ORTHO05D006306 9.8e-34 149.4 117 59.0
PRCOL_00002122 Prasinoderma coloniale HOM05D005709 ORTHO05D006306 2.2e-33 148.3 695 28.2
BcaC01g02777 Brassica carinata HOM05D005709 ORTHO05D006306 7.3e-21 106.7 205 34.6
SalBow5G5475 Salvia bowleyana HOM05D036480 ORTHO05D006306 1.6e-15 89.0 99 49.5
SEGI_13404 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 6.6e-14 83.6 107 44.9
TPR.G34440 Trifolium pratense HOM05D005709 ORTHO05D006306 9.5e-13 79.7 63 61.9
BolC2t12478H Brassica oleracea HOM05D005709 ORTHO05D006306 6.2e-12 77.0 113 41.6
TPR.G25795 Trifolium pratense HOM05D005709 ORTHO05D006306 8.1e-12 76.6 63 60.3
SMO207G0001 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 1.8e-11 75.5 91 44.0
C02p64140 Brassica napus HOM05D005709 ORTHO05D006306 6.8e-11 73.6 113 39.8
SMO162G0006 Selaginella moellendorffii HOM05D000981 ORTHO05D006306 2.6e-10 71.6 188 32.4
CARHR215690 Cardamine hirsuta HOM05D005709 ORTHO05D006306 2.2e-09 68.6 53 60.4
HPP92_015331 Vanilla planifolia HOM05D005709 ORTHO05D006306 3.2e-08 64.7 58 58.6
Phvul.008G217000 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 9.2e-08 63.2 44 63.6


User provided reference genes

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