Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11699 Utricularia gibba HOM05D000508 ORTHO05D000371 9.5e-53 209.9 107 100.0
Duzib212G0247 Durio zibethinus HOM05D000508 ORTHO05D000371 1.0e-09 67.0 45 73.3
Actinidia20823 Actinidia chinensis HOM05D000508 ORTHO05D000371 1.3e-09 66.6 103 48.5
SGA_v2.0_scaffold67G22724 Striga asiatica HOM05D000508 ORTHO05D000371 1.3e-09 66.6 96 47.9
FAN17G0352 Fragaria x ananassa HOM05D000508 ORTHO05D000371 2.2e-09 65.9 94 46.8
Thecc.04G259300 Theobroma cacao HOM05D000508 ORTHO05D000371 2.2e-09 65.9 45 68.9
Potri.008G169400 Populus trichocarpa HOM05D000508 ORTHO05D000371 2.9e-09 65.5 40 80.0
Sabra08G0129300 Salix brachista HOM05D000508 ORTHO05D000371 2.9e-09 65.5 40 80.0
Glyma.02G003700 Glycine max HOM05D000508 ORTHO05D000371 3.8e-09 65.1 46 71.7
Aa31LG8G9920 Aethionema arabicum HOM05D000508 ORTHO05D000371 4.9e-09 64.7 40 80.0
BcaB04g20448 Brassica carinata HOM05D000508 ORTHO05D000371 4.9e-09 64.7 40 80.0
BcaC09g49298 Brassica carinata HOM05D000508 ORTHO05D000371 4.9e-09 64.7 40 80.0
A01p31590 Brassica napus HOM05D000508 ORTHO05D000371 4.9e-09 64.7 40 80.0
C01p40420 Brassica napus HOM05D000508 ORTHO05D000371 4.9e-09 64.7 40 80.0
BolC1t03998H Brassica oleracea HOM05D000508 ORTHO05D000371 4.9e-09 64.7 40 80.0
BraA01t03288Z Brassica rapa HOM05D000508 ORTHO05D000371 4.9e-09 64.7 40 80.0
FvH4_4g04040 Fragaria vesca HOM05D000508 ORTHO05D000371 4.9e-09 64.7 94 45.7
FAN12G3027 Fragaria x ananassa HOM05D000508 ORTHO05D000371 4.9e-09 64.7 94 45.7
FAN22G0318 Fragaria x ananassa HOM05D000508 ORTHO05D000371 4.9e-09 64.7 94 45.7
Sabra10G0038100 Salix brachista HOM05D000508 ORTHO05D000371 4.9e-09 64.7 51 68.6
SalBow3G4080 Salvia bowleyana HOM05D000508 ORTHO05D000371 4.9e-09 64.7 97 48.5
Cpa.g.sc44.30 Carica papaya HOM05D000508 ORTHO05D000371 6.5e-09 64.3 41 78.0
Glyma.10G183300 Glycine max HOM05D000508 ORTHO05D000371 8.4e-09 63.9 36 86.1
Glyma.20G206900 Glycine max HOM05D000508 ORTHO05D000371 8.4e-09 63.9 36 86.1
Gohir.A02G040600 Gossypium hirsutum HOM05D000508 ORTHO05D000371 8.4e-09 63.9 92 44.6
Lj5g0011025 Lotus japonicus HOM05D000508 ORTHO05D000371 8.4e-09 63.9 48 68.8
Manes.15G043500 Manihot esculenta HOM05D000508 ORTHO05D000371 8.4e-09 63.9 51 64.7
Phvul.010G072003 Phaseolus vulgaris HOM05D000508 ORTHO05D000371 8.4e-09 63.9 36 86.1
PGR031G3060 Punica granatum HOM05D000508 ORTHO05D000371 8.4e-09 63.9 99 42.4
SHI00726 Sapria himalayana HOM05D000508 ORTHO05D000371 8.4e-09 63.9 40 75.0
VMungo0720G1663 Vigna mungo HOM05D000508 ORTHO05D000371 8.4e-09 63.9 36 86.1
Actinidia35801 Actinidia chinensis HOM05D000508 ORTHO05D000371 1.1e-08 63.5 97 49.5
arahy.Tifrunner.gnm1.ann1.KRN650 Arachis hypogaea HOM05D000508 ORTHO05D000371 1.1e-08 63.5 96 49.0
CAN.G220.41 Capsicum annuum HOM05D000508 ORTHO05D000371 1.1e-08 63.5 40 77.5
Manes.03G162100 Manihot esculenta HOM05D000508 ORTHO05D000371 1.1e-08 63.5 40 77.5
Hund03057 Selenicereus undatus HOM05D000508 ORTHO05D000371 1.1e-08 63.5 49 67.3
Atru.chr4.2002 Acer truncatum HOM05D000508 ORTHO05D000371 1.4e-08 63.2 40 77.5
Ca_03011_v3 Cicer arietinum L. HOM05D000508 ORTHO05D000371 1.4e-08 63.2 94 47.9
Gohir.A10G109500 Gossypium hirsutum HOM05D000508 ORTHO05D000371 1.4e-08 63.2 43 74.4
Lalb_Chr21g0312171 Lupinus albus HOM05D000508 ORTHO05D000371 1.4e-08 63.2 36 83.3
PGR004G1425 Punica granatum HOM05D000508 ORTHO05D000371 1.4e-08 63.2 40 77.5
HPP92_005401 Vanilla planifolia HOM05D000508 ORTHO05D000371 1.4e-08 63.2 36 83.3
arahy.Tifrunner.gnm1.ann1.8S3TJW Arachis hypogaea HOM05D000508 ORTHO05D000371 1.9e-08 62.8 36 83.3
arahy.Tifrunner.gnm1.ann1.KML3HI Arachis hypogaea HOM05D000508 ORTHO05D000371 1.9e-08 62.8 36 83.3
Cc03_g05810 Coffea canephora HOM05D000508 ORTHO05D000371 1.9e-08 62.8 52 61.5
Haze_11421 Corylus avellana HOM05D000508 ORTHO05D000371 1.9e-08 62.8 36 80.6
Gohir.D10G157700 Gossypium hirsutum HOM05D000508 ORTHO05D000371 1.9e-08 62.8 40 80.0
Gorai.011G177200 Gossypium raimondii HOM05D000508 ORTHO05D000371 1.9e-08 62.8 40 80.0
Potri.010G069000 Populus trichocarpa HOM05D000508 ORTHO05D000371 1.9e-08 62.8 36 83.3
RcHm_v2.0_Chr4g0394321 Rosa chinensis HOM05D000508 ORTHO05D000371 1.9e-08 62.8 51 64.7
Sc19g0003240 Simmondsia chinensis HOM05D000508 ORTHO05D000371 1.9e-08 62.8 96 42.7
THA.LOC104808646 Tarenaya hassleriana HOM05D000508 ORTHO05D000371 1.9e-08 62.8 92 45.7
Duzib151G0946 Durio zibethinus HOM05D000508 ORTHO05D000371 2.5e-08 62.4 44 70.5
Eucgr.H00140 Eucalyptus grandis HOM05D000508 ORTHO05D000371 2.5e-08 62.4 40 77.5
Lalb_Chr03g0037331 Lupinus albus HOM05D000508 ORTHO05D000371 2.5e-08 62.4 92 45.7
Phvul.007G275300 Phaseolus vulgaris HOM05D000508 ORTHO05D000371 2.5e-08 62.4 35 85.7
Solyc09g090360.3 Solanum lycopersicum HOM05D000508 ORTHO05D000371 2.5e-08 62.4 36 83.3
Sopen09g033260 Solanum pennellii HOM05D000508 ORTHO05D000371 2.5e-08 62.4 36 83.3
PGSC0003DMG400017163 Solanum tuberosum HOM05D000508 ORTHO05D000371 2.5e-08 62.4 36 83.3
vmacro08523 Vaccinium macrocarpon HOM05D000508 ORTHO05D000371 2.5e-08 62.4 40 77.5
arahy.Tifrunner.gnm1.ann1.S9NQXQ Arachis hypogaea HOM05D000508 ORTHO05D000371 3.2e-08 62.0 96 47.9
AUR62015542 Chenopodium quinoa HOM05D000508 ORTHO05D000371 3.2e-08 62.0 52 63.5
Migut.N00287 Erythranthe guttata HOM05D000508 ORTHO05D000371 3.2e-08 62.0 98 43.9
Glyma.10G004800 Glycine max HOM05D000508 ORTHO05D000371 3.2e-08 62.0 97 43.3
Psat6g104560 Pisum sativum HOM05D000508 ORTHO05D000371 3.2e-08 62.0 36 80.6
THA.LOC104804762 Tarenaya hassleriana HOM05D000508 ORTHO05D000371 3.2e-08 62.0 89 46.1
TPR.G25194 Trifolium pratense HOM05D000508 ORTHO05D000371 3.2e-08 62.0 92 46.7
TAR362G0633 Trochodendron aralioides HOM05D000508 ORTHO05D000371 3.2e-08 62.0 36 83.3
BcaB06g26486 Brassica carinata HOM05D000508 ORTHO05D000371 4.2e-08 61.6 40 75.0
BcaC06g35520 Brassica carinata HOM05D000508 ORTHO05D000371 4.2e-08 61.6 40 75.0
A07p09020 Brassica napus HOM05D000508 ORTHO05D000371 4.2e-08 61.6 40 75.0
C07p13980 Brassica napus HOM05D000508 ORTHO05D000371 4.2e-08 61.6 40 75.0
BolC7t41894H Brassica oleracea HOM05D000508 ORTHO05D000371 4.2e-08 61.6 40 75.0
BraA07t28696Z Brassica rapa HOM05D000508 ORTHO05D000371 4.2e-08 61.6 40 75.0
Carub.0003s2368 Capsella rubella HOM05D000508 ORTHO05D000371 4.2e-08 61.6 40 75.0
Duzib052G0215 Durio zibethinus HOM05D000508 ORTHO05D000371 4.2e-08 61.6 45 68.9
Nn3g19724 Nelumbo nucifera HOM05D000508 ORTHO05D000371 4.2e-08 61.6 35 82.9
Prupe.1G042500 Prunus persica HOM05D000508 ORTHO05D000371 4.2e-08 61.6 98 45.9
Sp3g21090 Schrenkiella parvula HOM05D000508 ORTHO05D000371 4.2e-08 61.6 40 75.0
CiPaw.02G109100 Carya illinoinensis HOM05D000508 ORTHO05D000371 5.5e-08 61.2 48 64.6
Eucgr.H03016 Eucalyptus grandis HOM05D000508 ORTHO05D000371 5.5e-08 61.2 36 83.3
Thhalv10020107m.g Eutrema salsugineum HOM05D000508 ORTHO05D000371 5.5e-08 61.2 40 75.0
Nn1g02861 Nelumbo nucifera HOM05D000508 ORTHO05D000371 5.5e-08 61.2 40 75.0
Oeu037588.1 Olea europaea HOM05D000508 ORTHO05D000371 5.5e-08 61.2 52 63.5
QL06p019713 Quercus lobata HOM05D000508 ORTHO05D000371 5.5e-08 61.2 46 67.4
TAR636G0067 Trochodendron aralioides HOM05D000508 ORTHO05D000371 5.5e-08 61.2 36 83.3
Ah.04g155540 Amaranthus hybridus HOM05D000508 ORTHO05D000371 7.1e-08 60.8 88 42.0
ECA233G2536 Erigeron canadensis HOM05D000508 ORTHO05D000093 7.1e-08 60.8 36 80.6
Medtr1g041695 Medicago truncatula HOM05D000508 ORTHO05D000371 7.1e-08 60.8 36 77.8
TWI09G1008 Tripterygium wilfordii HOM05D000508 ORTHO05D000371 7.1e-08 60.8 41 73.2
GSVIVG01027857001 Vitis vinifera HOM05D000508 ORTHO05D000371 7.1e-08 60.8 36 80.6
AL3G38090 Arabidopsis lyrata HOM05D000508 ORTHO05D000371 9.3e-08 60.5 40 75.0
AT3G23430 Arabidopsis thaliana HOM05D000508 ORTHO05D000371 9.3e-08 60.5 40 75.0
MSTRG.4150 Avicennia marina HOM05D000508 ORTHO05D000371 9.3e-08 60.5 82 48.8
MELO3C006404.2 Cucumis melo HOM05D000508 ORTHO05D000371 9.3e-08 60.5 36 83.3
TAR365G0605 Trochodendron aralioides HOM05D000508 ORTHO05D000371 9.3e-08 60.5 36 83.3
Aqoxy2G03707 Aquilegia oxysepala HOM05D000508 ORTHO05D000371 1.2e-07 60.1 36 80.6
Cfa014746 Carpinus fangiana HOM05D000508 ORTHO05D000371 1.2e-07 60.1 95 43.2
Sed0014746 Sechium edule HOM05D000508 ORTHO05D000371 1.2e-07 60.1 55 60.0
ClCG05G004180 Citrullus lanatus HOM05D000508 ORTHO05D000371 1.6e-07 59.7 87 44.8
Dinv27075 Davidia involucrata HOM05D000508 ORTHO05D000371 1.6e-07 59.7 93 48.4
Gohir.D02G046600 Gossypium hirsutum HOM05D000508 ORTHO05D000371 1.6e-07 59.7 36 77.8
Gorai.005G051400 Gossypium raimondii HOM05D000508 ORTHO05D000371 1.6e-07 59.7 36 77.8
MBI10_g00882_MAGBIO Magnolia biondii HOM05D000508 ORTHO05D000371 1.6e-07 59.7 35 80.0
MD13G1216900 Malus domestica HOM05D000508 ORTHO05D000371 1.6e-07 59.7 47 70.2
Rhsim04G0175700 Rhododendron simsii HOM05D000508 ORTHO05D000371 1.6e-07 59.7 40 75.0
VMungo0720G0282 Vigna mungo HOM05D000508 ORTHO05D000371 1.6e-07 59.7 98 42.9
AUR62002167 Chenopodium quinoa HOM05D000508 ORTHO05D000371 2.1e-07 59.3 102 41.2
DCAR_024280 Daucus carota HOM05D000508 ORTHO05D000371 2.1e-07 59.3 40 70.0
Medtr1g075640 Medicago truncatula HOM05D000508 ORTHO05D000371 2.1e-07 59.3 94 43.6
PSO017G5409 Papaver somniferum HOM05D000508 ORTHO05D000371 2.1e-07 59.3 36 77.8
PSO063G1268 Papaver somniferum HOM05D000508 ORTHO05D000371 2.1e-07 59.3 36 77.8
Psat6g122480 Pisum sativum HOM05D000508 ORTHO05D000371 2.1e-07 59.3 92 44.6
Sed0026595 Sechium edule HOM05D000508 ORTHO05D000371 2.1e-07 59.3 99 45.5
Hund11911 Selenicereus undatus HOM05D000508 ORTHO05D000371 2.1e-07 59.3 39 76.9
Lalb_Chr06g0169231 Lupinus albus HOM05D000508 ORTHO05D000371 2.7e-07 58.9 36 77.8
MBI07_g31077_MAGBIO Magnolia biondii HOM05D000508 ORTHO05D000371 2.7e-07 58.9 91 46.2
Peaxi162Scf00602g00111 Petunia axillaris HOM05D000508 ORTHO05D000371 2.7e-07 58.9 40 72.5
TWI53G0641 Tripterygium wilfordii HOM05D000508 ORTHO05D000371 2.7e-07 58.9 36 75.0
CANSAT78G1030 Cannabis sativa HOM05D000508 ORTHO05D000371 3.5e-07 58.5 35 80.0
Nitab4.5_0000596g0020 Nicotiana tabacum HOM05D000508 ORTHO05D000371 3.5e-07 58.5 94 43.6
TPR.G10079 Trifolium pratense HOM05D000508 ORTHO05D000371 3.5e-07 58.5 84 46.4
MD16G1222100 Malus domestica HOM05D000508 ORTHO05D000371 4.6e-07 58.2 93 44.1
CDE04G1926 Ceratophyllum demersum HOM05D000508 ORTHO05D000371 6.0e-07 57.8 35 77.1
Ciclev10004390m.g Citrus clementina HOM05D000508 ORTHO05D000371 6.0e-07 57.8 95 44.2
TWI73G0499 Tripterygium wilfordii HOM05D000508 ORTHO05D000371 6.0e-07 57.8 41 70.7
CDE07G0128 Ceratophyllum demersum HOM05D000508 ORTHO05D000371 7.9e-07 57.4 35 77.1
Lsat_1_v5_gn_7_94440 Lactuca sativa HOM05D000508 ORTHO05D000371 7.9e-07 57.4 96 44.8
CsaV3_3G011910 Cucumis sativus L. HOM05D000508 ORTHO05D000371 1.0e-06 57.0 87 42.5
Lj6g0005928 Lotus japonicus HOM05D000508 ORTHO05D000371 1.0e-06 57.0 94 43.6
Zm00001eb191650 Zea mays HOM05D000508 ORTHO05D000371 1.8e-06 56.2 50 60.0
EL10Ac3g04976 Beta vulgaris HOM05D000508 ORTHO05D000371 2.3e-06 55.8 40 67.5
HanXRQChr02g0059191 Helianthus annuus HOM05D000508 ORTHO05D000371 2.3e-06 55.8 95 41.1
MSTRG.9881 Avicennia marina HOM05D000508 ORTHO05D000371 3.0e-06 55.5 96 43.8
Eucgr.H00142 Eucalyptus grandis HOM05D000508 ORTHO05D000371 3.0e-06 55.5 39 69.2
SalBow3G2727 Salvia bowleyana HOM05D000508 ORTHO05D000371 3.0e-06 55.5 103 36.9
SEGI_41556 Sequoiadendron giganteum HOM05D000508 ORTHO05D000371 3.0e-06 55.5 49 55.1
SEGI_00498 Sequoiadendron giganteum HOM05D000508 ORTHO05D000371 3.9e-06 55.1 33 75.8
Oeu044396.1 Olea europaea HOM05D000508 ORTHO05D000371 5.1e-06 54.7 35 65.7
Oeu041862.2 Olea europaea HOM05D000508 ORTHO05D000371 6.7e-06 54.3 39 56.4
Os02g0809800 Oryza sativa ssp. japonica HOM05D000508 ORTHO05D000371 6.7e-06 54.3 38 63.2
ATR0736G156 Amborella trichopoda HOM05D000508 ORTHO05D000371 8.7e-06 53.9 96 41.7
CiPaw.01G181300 Carya illinoinensis HOM05D000508 ORTHO05D000371 8.7e-06 53.9 36 61.1


User provided reference genes

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