Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11679 Utricularia gibba HOM05D004305 ORTHO05D005159 7.0e-69 263.8 134 100.0
unitig_748.g7348 Utricularia gibba HOM05D004305 ORTHO05D005159 4.9e-38 161.4 134 66.4
unitig_32.g10874 Utricularia gibba HOM05D004305 ORTHO05D005159 3.7e-22 108.6 134 51.5
unitig_748.g8282 Utricularia gibba HOM05D004305 ORTHO05D005159 3.5e-20 102.1 137 52.6
Oeu060316.1 Olea europaea HOM05D004305 ORTHO05D005159 2.5e-18 95.9 157 42.7
MSTRG.16299 Avicennia marina HOM05D004305 ORTHO05D005159 7.3e-18 94.4 170 41.8
Oeu041117.1 Olea europaea HOM05D004305 ORTHO05D005159 9.5e-18 94.0 146 43.2
Migut.M01906 Erythranthe guttata HOM05D004305 ORTHO05D005159 3.1e-16 89.0 161 40.4
MSTRG.7546 Avicennia marina HOM05D004305 ORTHO05D005159 5.8e-15 84.7 136 44.1
Oeu015165.2 Olea europaea HOM05D004305 ORTHO05D005159 9.9e-15 84.0 160 36.9
SGA_v2.0_scaffold223G42870 Striga asiatica HOM05D004305 ORTHO05D005159 4.9e-14 81.6 134 41.0
Dinv06927 Davidia involucrata HOM05D004305 ORTHO05D005159 6.4e-14 81.3 83 50.6
SGA_v2.0_scaffold1G00275 Striga asiatica HOM05D004305 ORTHO05D005159 1.9e-13 79.7 155 38.7
Rhsim02G0163100 Rhododendron simsii HOM05D004305 ORTHO05D005159 7.1e-13 77.8 89 51.7
Solyc02g070040.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 1.7e-11 73.2 131 40.5
Actinidia13459 Actinidia chinensis HOM05D004305 ORTHO05D005159 2.3e-11 72.8 149 36.2
CSS0026993 Camellia sinensis var. sinensis HOM05D004305 ORTHO05D005159 2.3e-11 72.8 104 43.3
Peaxi162Scf00395g00054 Petunia axillaris HOM05D004305 ORTHO05D005159 2.3e-11 72.8 155 36.1
Oeu040075.1 Olea europaea HOM05D004305 ORTHO05D005159 3.9e-11 72.0 149 40.3
Sopen02g019200 Solanum pennellii HOM05D004305 ORTHO05D005159 3.9e-11 72.0 131 40.5
Solyc02g022920.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 8.6e-11 70.9 152 35.5
Sopen02g006550 Solanum pennellii HOM05D004305 ORTHO05D005159 1.1e-10 70.5 146 36.3
PGSC0003DMG400021011 Solanum tuberosum HOM05D004305 ORTHO05D005159 1.5e-10 70.1 150 37.3
PGSC0003DMG400021114 Solanum tuberosum HOM05D004305 ORTHO05D005159 4.3e-10 68.6 131 38.9
Thecc.06G003200 Theobroma cacao HOM05D004305 ORTHO05D005159 5.6e-10 68.2 137 38.7
Nitab4.5_0000076g0140 Nicotiana tabacum HOM05D004305 ORTHO05D005159 9.6e-10 67.4 141 37.6
Nitab4.5_0001583g0210 Nicotiana tabacum HOM05D004305 ORTHO05D005159 9.6e-10 67.4 140 33.6
EL10Ac4g07786 Beta vulgaris HOM05D023924 ORTHO05D023401 2.8e-09 65.9 94 45.7
Cpa.g.c43226 Carica papaya HOM05D004305 ORTHO05D005159 3.6e-09 65.5 147 34.7
COL.COLO4_26846 Corchorus olitorius HOM05D004305 ORTHO05D005159 3.6e-09 65.5 128 39.8
Duzib192G0088 Durio zibethinus HOM05D004305 ORTHO05D005159 3.6e-09 65.5 136 39.7
PSO675G0053 Papaver somniferum HOM05D004305 ORTHO05D005159 3.6e-09 65.5 114 39.5
Cc09_g07570 Coffea canephora HOM05D004305 ORTHO05D005159 4.7e-09 65.1 145 35.2
Sc03g0008520 Simmondsia chinensis HOM05D004305 ORTHO05D005159 6.2e-09 64.7 62 58.1
CARHR227440 Cardamine hirsuta HOM05D004305 ORTHO05D005159 1.4e-08 63.5 88 47.7
Nitab4.5_0004204g0010 Nicotiana tabacum HOM05D004305 ORTHO05D005159 1.4e-08 63.5 138 39.9
QL05p063597 Quercus lobata HOM05D004305 ORTHO05D005159 1.4e-08 63.5 150 36.7
QL93p0201_0023 Quercus lobata HOM05D004305 ORTHO05D005159 1.4e-08 63.5 150 36.7
THA.LOC104806249 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 1.8e-08 63.2 58 55.2
Ciclev10015182m.g Citrus clementina HOM05D004305 ORTHO05D005159 2.4e-08 62.8 80 46.2
Lj1P1160T59 Lonicera japonica HOM05D004305 ORTHO05D005159 2.4e-08 62.8 154 36.4
MBI02_g39880_MAGBIO Magnolia biondii HOM05D004305 ORTHO05D005159 3.1e-08 62.4 145 37.2
Aa31LG6G2950 Aethionema arabicum HOM05D004305 ORTHO05D005159 4.0e-08 62.0 86 45.3
BcaB03g11678 Brassica carinata HOM05D004305 ORTHO05D005159 4.0e-08 62.0 94 39.4
Nn1g07139 Nelumbo nucifera HOM05D004305 ORTHO05D005159 4.0e-08 62.0 87 43.7
BraA01t01174Z Brassica rapa HOM05D004305 ORTHO05D005159 5.2e-08 61.6 68 50.0
AUR62014849 Chenopodium quinoa HOM05D002349 ORTHO05D002464 5.2e-08 61.6 65 52.3
Duzib235G0167 Durio zibethinus HOM05D004305 ORTHO05D005159 6.8e-08 61.2 140 37.9
FAN25G2552 Fragaria x ananassa HOM05D004305 ORTHO05D005159 6.8e-08 61.2 165 36.4
Sp7g18970 Schrenkiella parvula HOM05D004305 ORTHO05D005159 6.8e-08 61.2 61 54.1
Actinidia32347 Actinidia chinensis HOM05D004305 ORTHO05D005159 8.9e-08 60.8 87 42.5
THA.LOC104812214 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 8.9e-08 60.8 57 56.1
BcaNung07356 Brassica carinata HOM05D004305 ORTHO05D005159 1.5e-07 60.1 111 39.6
A01p12300 Brassica napus HOM05D004305 ORTHO05D005159 1.5e-07 60.1 90 42.2
TWI15G0126 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 1.5e-07 60.1 144 33.3
Thhalv10025304m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 2.0e-07 59.7 58 56.9
C01p14710 Brassica napus HOM05D004305 ORTHO05D005159 2.6e-07 59.3 61 54.1
BolC1t01423H Brassica oleracea HOM05D004305 ORTHO05D005159 2.6e-07 59.3 61 54.1
FAN16G1832 Fragaria x ananassa HOM05D004305 ORTHO05D005159 2.6e-07 59.3 165 36.4
MD05G1269300 Malus domestica HOM05D004305 ORTHO05D005159 2.6e-07 59.3 60 53.3
Prupe.4G095400 Prunus persica HOM05D004305 ORTHO05D005159 2.6e-07 59.3 62 53.2
FvH4_3g10700 Fragaria vesca HOM05D004305 ORTHO05D005159 3.4e-07 58.9 165 37.0
BcaC09g51296 Brassica carinata HOM05D004305 ORTHO05D005159 4.4e-07 58.5 58 56.9
Eucgr.D00100 Eucalyptus grandis HOM05D004305 ORTHO05D005159 4.4e-07 58.5 60 51.7
Actinidia31373 Actinidia chinensis HOM05D004305 ORTHO05D005159 5.8e-07 58.2 53 56.6
Carub.0007s2055 Capsella rubella HOM05D004305 ORTHO05D005159 5.8e-07 58.2 61 52.5
C07p27080 Brassica napus HOM05D004305 ORTHO05D005159 7.6e-07 57.8 143 35.0
Sp2g09190 Schrenkiella parvula HOM05D004305 ORTHO05D005159 7.6e-07 57.8 65 49.2
AL7G33270 Arabidopsis lyrata HOM05D004305 ORTHO05D005159 9.9e-07 57.4 58 55.2
AT4G20880 Arabidopsis thaliana HOM05D004305 ORTHO05D005159 9.9e-07 57.4 80 40.0
RcHm_v2.0_Chr5g0017411 Rosa chinensis HOM05D004305 ORTHO05D005159 9.9e-07 57.4 83 42.2
Sabra11G0141400 Salix brachista HOM05D004305 ORTHO05D005159 9.9e-07 57.4 58 51.7
BolC7t43238H Brassica oleracea HOM05D004305 ORTHO05D005159 1.7e-06 56.6 143 35.0
BcaC06g31624 Brassica carinata HOM05D004305 ORTHO05D005159 2.2e-06 56.2 134 33.6
BcaC06g34566 Brassica carinata HOM05D004305 ORTHO05D005159 2.2e-06 56.2 143 34.3
FAN11G3528 Fragaria x ananassa HOM05D004305 ORTHO05D005159 2.2e-06 56.2 164 33.5
Sabra16G0315300 Salix brachista HOM05D004305 ORTHO05D005159 2.9e-06 55.8 58 53.4
BcaNung04140 Brassica carinata HOM05D004305 ORTHO05D005159 3.8e-06 55.5 154 36.4
ClCG01G025280 Citrullus lanatus HOM05D004305 ORTHO05D005159 3.8e-06 55.5 97 39.2
BcaC01g00679 Brassica carinata HOM05D004305 ORTHO05D005159 4.9e-06 55.1 116 37.9
A03p52530 Brassica napus HOM05D004305 ORTHO05D005159 4.9e-06 55.1 89 43.8
C03p83040 Brassica napus HOM05D004305 ORTHO05D005159 4.9e-06 55.1 116 37.9
BolC3t20584H Brassica oleracea HOM05D004305 ORTHO05D005159 4.9e-06 55.1 116 37.9
MELO3C007060.2 Cucumis melo HOM05D004305 ORTHO05D005159 4.9e-06 55.1 97 39.2
DCAR_003840 Daucus carota HOM05D004305 ORTHO05D005159 4.9e-06 55.1 148 32.4
Potri.011G162400 Populus trichocarpa HOM05D004305 ORTHO05D005159 4.9e-06 55.1 58 53.4
BcaNung05413 Brassica carinata HOM05D004305 ORTHO05D005159 6.4e-06 54.7 89 43.8
A08p14960 Brassica napus HOM05D004305 ORTHO05D005159 6.4e-06 54.7 80 43.8
C07p50970 Brassica napus HOM05D004305 ORTHO05D005159 6.4e-06 54.7 89 43.8
BolC7t45599H Brassica oleracea HOM05D004305 ORTHO05D005159 6.4e-06 54.7 89 43.8
BraA08t33477Z Brassica rapa HOM05D004305 ORTHO05D005159 6.4e-06 54.7 80 43.8
CDE02G2479 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 6.4e-06 54.7 62 45.2
Atru.chr10.781 Acer truncatum HOM05D004305 ORTHO05D005159 8.4e-06 54.3 60 53.3
Ah.04g165990 Amaranthus hybridus HOM05D023924 ORTHO05D023401 8.4e-06 54.3 87 42.5
CsaV3_6G052500 Cucumis sativus L. HOM05D004305 ORTHO05D005159 8.4e-06 54.3 97 39.2
Gorai.010G144500 Gossypium raimondii HOM05D004305 ORTHO05D005159 8.4e-06 54.3 123 35.0
MD10G1248100 Malus domestica HOM05D004305 ORTHO05D005159 8.4e-06 54.3 60 50.0
Manes.14G124700 Manihot esculenta HOM05D004305 ORTHO05D005159 8.4e-06 54.3 62 46.8


User provided reference genes

Program Settings