Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 3.5e-283 977.6 494 100.0
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 7.2e-212 740.7 505 73.9
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 2.8e-208 728.8 490 73.5
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 2.8e-208 728.8 490 73.5
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 5.9e-206 721.1 495 72.7
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 1.0e-205 720.3 480 74.2
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.0e-205 720.3 489 73.4
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 1.3e-205 719.9 492 73.0
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 1.3e-205 719.9 489 72.8
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 2.9e-205 718.8 488 73.4
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.9e-205 718.8 489 73.2
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 3.8e-205 718.4 479 74.7
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 6.5e-205 717.6 488 73.2
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 1.1e-204 716.8 488 73.6
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 1.9e-204 716.1 483 73.7
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 1.9e-204 716.1 483 73.3
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 2.1e-203 712.6 495 71.1
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 2.7e-203 712.2 493 71.8
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 3.6e-203 711.8 481 73.2
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 3.0e-202 708.8 482 72.8
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 3.9e-202 708.4 480 73.5
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 6.7e-202 707.6 490 72.4
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 1.1e-201 706.8 492 71.5
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 2.6e-201 705.7 483 72.3
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 2.6e-201 705.7 494 72.3
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 4.4e-201 704.9 490 72.2
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 4.4e-201 704.9 495 71.3
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 5.7e-201 704.5 485 73.0
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 7.4e-201 704.1 485 72.8
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 9.7e-201 703.7 493 71.8
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 1.3e-200 703.4 482 72.6
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 2.2e-200 702.6 486 72.2
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 2.2e-200 702.6 485 72.6
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 2.2e-200 702.6 485 72.8
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 2.2e-200 702.6 480 71.9
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 8.2e-200 700.7 494 71.5
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.8e-199 699.5 481 71.7
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 1.8e-199 699.5 485 72.2
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 4.1e-199 698.4 494 72.1
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 1.5e-198 696.4 485 71.3
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 2.0e-198 696.0 478 72.6
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 3.4e-198 695.3 494 70.9
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 7.7e-198 694.1 484 71.1
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 1.3e-197 693.3 495 71.1
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 3.8e-197 691.8 488 69.9
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 6.5e-197 691.0 486 71.0
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 8.5e-197 690.6 480 71.0
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 5.5e-196 688.0 483 72.5
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 7.2e-196 687.6 482 71.4
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 9.4e-196 687.2 478 70.5
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 9.4e-196 687.2 495 70.1
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 1.2e-195 686.8 478 70.5
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 1.2e-195 686.8 478 70.5
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 2.1e-195 686.0 483 71.0
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 2.7e-195 685.6 479 71.0
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 3.6e-195 685.3 483 71.4
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 3.6e-195 685.3 494 69.8
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 7.9e-195 684.1 481 71.3
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 7.9e-195 684.1 484 70.7
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 1.0e-194 683.7 478 70.1
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 1.0e-194 683.7 478 70.1
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 1.8e-194 682.9 481 70.3
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 2.3e-194 682.6 483 70.8
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 3.0e-194 682.2 481 70.9
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 3.0e-194 682.2 479 70.6
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 3.9e-194 681.8 481 70.3
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 3.9e-194 681.8 481 70.5
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 5.2e-194 681.4 486 70.2
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 5.2e-194 681.4 481 69.9
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 6.7e-194 681.0 481 70.1
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 1.1e-193 680.2 483 70.4
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 2.0e-193 679.5 482 69.9
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 2.6e-193 679.1 478 70.7
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 3.3e-193 678.7 485 69.9
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 3.3e-193 678.7 481 69.9
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 4.4e-193 678.3 481 69.9
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 4.4e-193 678.3 481 69.6
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 5.7e-193 677.9 480 70.2
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 9.7e-193 677.2 484 69.2
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 2.2e-192 676.0 489 69.1
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 2.2e-192 676.0 454 74.2
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 6.3e-192 674.5 516 67.6
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 8.2e-192 674.1 480 70.0
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 1.8e-191 672.9 477 70.2
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 1.8e-191 672.9 477 70.2
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 1.2e-190 670.2 483 69.8
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 2.0e-190 669.5 491 68.6
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 7.7e-190 667.5 491 68.6
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 7.7e-190 667.5 506 67.0
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 2.2e-189 666.0 481 69.4
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 2.9e-189 665.6 477 69.2
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 3.8e-189 665.2 480 69.4
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 1.1e-188 663.7 478 69.5
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 1.5e-188 663.3 498 66.7
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 9.4e-188 660.6 495 68.3
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 3.6e-187 658.7 519 64.9
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 2.8e-184 649.0 479 68.5
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 6.3e-184 647.9 481 67.8
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 7.0e-183 644.4 477 67.7
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 9.1e-183 644.0 492 66.9
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 2.0e-182 642.9 498 67.3
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 1.7e-181 639.8 480 66.7
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 5.0e-181 638.3 522 64.2
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 8.5e-181 637.5 485 64.5
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 4.2e-180 635.2 461 68.5
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 3.7e-176 622.1 491 62.7
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 1.8e-175 619.8 492 63.0
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 3.1e-175 619.0 496 62.5
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 2.3e-173 612.8 491 61.9
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 3.8e-173 612.1 516 62.2
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 1.9e-172 609.8 500 60.2
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 1.2e-171 607.1 562 58.4
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 1.6e-171 606.7 497 61.8
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 8.0e-171 604.4 486 63.0
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 5.7e-169 598.2 487 62.6
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 3.1e-167 592.4 483 65.2
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 2.0e-166 589.7 489 62.0
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 4.5e-166 588.6 483 64.6
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 2.3e-165 586.3 482 64.1
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 2.1e-163 579.7 485 61.9
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 2.8e-163 579.3 484 61.2
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 1.8e-162 576.6 479 62.0
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 7.5e-161 571.2 485 59.0
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 6.4e-160 568.2 456 62.5
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 1.2e-158 563.9 495 61.6
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 8.0e-155 551.2 395 70.4
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 1.9e-151 540.0 498 55.4
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 1.8e-146 523.5 489 55.0
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.6e-142 510.4 352 73.6
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 5.6e-140 501.9 375 68.3
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 2.6e-137 493.0 362 70.4
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.8e-136 489.2 387 67.2
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 1.0e-133 481.1 358 69.6
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 1.3e-133 480.7 387 62.5
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 8.7e-133 478.0 391 63.7
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 8.7e-133 478.0 356 68.0
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 3.3e-132 476.1 548 49.6
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 4.9e-128 462.2 357 68.3
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 1.3e-117 427.6 463 49.2
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 3.9e-117 426.0 310 71.3
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 8.4e-112 408.3 296 71.3
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.0e-109 399.8 396 57.1
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 7.4e-108 395.2 272 73.2
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.8e-106 390.6 280 68.9
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 3.9e-101 372.9 275 68.7
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.7e-80 304.3 196 76.5
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 1.6e-78 297.7 233 65.2
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 4.7e-78 296.2 469 37.7
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 5.9e-73 279.3 250 62.8
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.7e-70 270.4 170 74.1
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 9.1e-66 255.4 217 64.5
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 2.7e-57 227.3 201 57.7
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 4.4e-52 209.9 231 52.4
ClCG01G009350 Citrullus lanatus HOM05D003643 ORTHO05D005001 9.2e-50 202.2 127 78.7
Psat6g162200 Pisum sativum HOM05D003643 ORTHO05D005001 1.3e-48 198.4 240 46.7
Lsat_1_v5_gn_5_36361 Lactuca sativa HOM05D003643 ORTHO05D018815 5.0e-48 196.4 131 71.0
BolC8t48075H Brassica oleracea HOM05D003643 ORTHO05D018815 1.9e-47 194.5 132 67.4
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 3.3e-47 193.7 153 64.7
Peaxi162Scf00149g01017 Petunia axillaris HOM05D003643 ORTHO05D018815 1.5e-44 184.9 129 69.8
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 8.3e-43 179.1 113 74.3
Phvul.L001639 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 8.6e-40 169.1 102 77.5
Phvul.L008801 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 8.6e-40 169.1 102 77.5
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 1.1e-37 162.2 294 41.5
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.4e-37 161.8 113 69.0
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 1.7e-35 154.8 113 63.7
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 8.3e-35 152.5 200 45.5
Lsat_1_v5_gn_5_135000 Lactuca sativa HOM05D003643 ORTHO05D005001 6.8e-21 106.3 97 57.7
Cc11_g00920 Coffea canephora HOM05D003643 ORTHO05D005001 1.5e-20 105.1 67 73.1
Haze_13619 Corylus avellana HOM05D003643 ORTHO05D034905 4.4e-20 103.6 108 58.3
Haze_13621 Corylus avellana HOM05D003643 ORTHO05D018815 4.4e-20 103.6 62 75.8
ClCG01G009330 Citrullus lanatus HOM05D003643 ORTHO05D018815 2.2e-19 101.3 62 74.2
Gohir.A10G145401 Gossypium hirsutum HOM05D003643 ORTHO05D018815 7.1e-18 96.3 59 72.9
Psat0s3903g0040 Pisum sativum HOM05D003643 ORTHO05D005001 7.1e-18 96.3 65 78.5
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 2.1e-17 94.7 64 73.4
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.7e-16 91.7 64 70.3
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 3.9e-16 90.5 64 70.3
CSS0023685 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 1.9e-15 88.2 67 62.7
Lsat_1_v5_gn_5_54460 Lactuca sativa HOM05D003643 ORTHO05D005001 2.1e-14 84.7 57 71.9
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.1e-13 82.4 76 59.2
CSS0032340 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 9.3e-10 69.3 48 62.5
HanXRQChr06g0180401 Helianthus annuus HOM05D003643 ORTHO05D005001 6.6e-08 63.2 49 67.3


User provided reference genes

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