Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 2.1e-272 941.8 482 100.0
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 7.2e-84 315.5 246 69.9
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 1.2e-78 298.1 269 62.8
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 6.1e-75 285.8 261 62.5
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 6.8e-74 282.3 268 59.0
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 5.8e-73 279.3 237 65.0
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 7.0e-71 272.3 233 63.1
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 9.2e-71 271.9 243 62.1
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 7.8e-70 268.9 261 60.9
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 6.6e-69 265.8 243 63.4
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 7.3e-68 262.3 238 66.0
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 4.7e-67 259.6 238 63.9
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 8.0e-67 258.8 237 63.7
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 1.8e-66 257.7 261 58.2
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 3.1e-66 256.9 261 57.9
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 3.1e-66 256.9 239 62.3
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 3.1e-66 256.9 237 63.7
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 4.0e-66 256.5 234 62.4
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 6.8e-66 255.8 254 60.6
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 1.3e-64 251.5 237 60.3
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 2.2e-64 250.8 256 59.8
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 2.2e-64 250.8 247 61.9
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 2.9e-64 250.4 268 59.3
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 1.1e-63 248.4 256 59.8
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 1.9e-63 247.7 255 58.4
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.9e-63 247.7 248 62.1
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 5.4e-63 246.1 236 61.0
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 2.7e-62 243.8 241 61.0
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 2.7e-62 243.8 256 57.4
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 3.5e-62 243.4 267 56.6
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 3.5e-62 243.4 232 62.9
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 7.8e-62 242.3 266 57.9
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 7.8e-62 242.3 240 60.8
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 2.3e-61 240.7 245 58.0
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 2.3e-61 240.7 248 60.5
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 3.0e-61 240.4 235 59.6
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 5.1e-61 239.6 248 58.9
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 6.6e-61 239.2 235 60.0
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 8.6e-61 238.8 254 56.7
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 1.1e-60 238.4 233 62.2
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 1.5e-60 238.0 237 59.5
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 1.5e-60 238.0 249 57.0
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 1.5e-60 238.0 256 57.4
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 1.5e-60 238.0 241 60.6
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 1.9e-60 237.7 241 60.2
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 2.5e-60 237.3 239 61.1
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 3.3e-60 236.9 228 61.4
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 3.3e-60 236.9 238 60.5
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 7.3e-60 235.7 248 55.2
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 9.5e-60 235.3 237 59.5
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 2.1e-59 234.2 240 59.6
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 2.1e-59 234.2 232 59.1
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 3.6e-59 233.4 248 58.5
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 4.7e-59 233.0 233 58.4
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 4.7e-59 233.0 232 60.3
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 6.2e-59 232.6 256 57.4
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 6.2e-59 232.6 235 57.9
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 1.4e-58 231.5 236 61.0
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 1.8e-58 231.1 255 53.7
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 3.1e-58 230.3 264 55.3
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 4.0e-58 229.9 255 54.5
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 4.0e-58 229.9 233 57.9
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 4.0e-58 229.9 320 48.1
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 1.5e-57 228.0 244 58.6
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 5.8e-57 226.1 233 59.2
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 2.2e-56 224.2 251 55.0
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 2.2e-56 224.2 241 58.5
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 6.4e-56 222.6 293 49.5
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 1.1e-55 221.9 235 55.7
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 1.9e-55 221.1 235 58.3
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 2.4e-55 220.7 228 57.0
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 7.1e-55 219.2 235 57.9
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 1.2e-54 218.4 227 58.6
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 2.1e-54 217.6 249 54.6
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 1.0e-53 215.3 244 55.7
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 2.3e-53 214.2 231 57.1
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 6.6e-53 212.6 225 57.8
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 1.5e-52 211.5 271 50.2
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 1.5e-52 211.5 271 50.2
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 1.9e-52 211.1 271 50.2
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 4.3e-52 209.9 187 66.8
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 7.3e-52 209.1 208 61.5
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 3.6e-51 206.8 292 48.6
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 1.8e-50 204.5 248 52.0
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 2.4e-50 204.1 256 51.2
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 3.1e-50 203.8 245 51.8
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 3.1e-50 203.8 245 51.8
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 3.1e-50 203.8 236 54.2
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 8.9e-50 202.2 241 52.3
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 3.4e-49 200.3 245 51.4
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 3.4e-49 200.3 243 51.4
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 3.4e-49 200.3 243 51.4
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 3.4e-49 200.3 243 51.4
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 7.6e-49 199.1 247 51.8
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 9.9e-49 198.7 240 54.2
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 1.3e-48 198.4 228 54.4
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 1.3e-48 198.4 240 52.1
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 1.7e-48 198.0 233 51.9
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 3.8e-48 196.8 231 53.7
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 1.1e-47 195.3 243 51.4
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 1.9e-47 194.5 235 52.8
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 2.4e-47 194.1 243 51.0
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 9.3e-47 192.2 160 71.2
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 9.3e-47 192.2 240 51.7
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 2.1e-46 191.0 235 52.8
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 1.0e-45 188.7 264 47.3
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 3.0e-45 187.2 240 50.8
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 1.9e-44 184.5 242 50.0
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 4.3e-44 183.3 231 49.8
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 1.6e-43 181.4 271 46.5
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 3.1e-42 177.2 250 46.0
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 3.8e-40 170.2 126 74.6
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 2.4e-31 141.0 269 39.4
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 1.9e-28 131.3 170 49.4
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 3.4e-25 120.6 124 57.3
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 1.3e-24 118.6 158 53.2
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 1.3e-24 118.6 168 45.8
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 2.9e-24 117.5 143 51.7
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 2.9e-24 117.5 230 38.7
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 3.8e-24 117.1 264 33.0
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 1.9e-23 114.8 127 51.2
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 8.4e-16 89.4 222 35.6
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 3.3e-12 77.4 178 38.8
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 3.4e-09 67.4 162 37.0
Sabra10G0116500 Salix brachista HOM05D005991 ORTHO05D007408 1.6e-06 58.5 110 38.2


User provided reference genes

Program Settings