Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11561 Utricularia gibba HOM05D001216 ORTHO05D003822 3.9e-48 194.5 100 100.0
unitig_748.g7470 Utricularia gibba HOM05D001216 ORTHO05D003822 7.1e-26 120.6 72 90.3
SalBow6G2735 Salvia bowleyana HOM05D001216 ORTHO05D003822 4.9e-19 97.8 74 70.3
SalBow6G3972 Salvia bowleyana HOM05D001216 ORTHO05D003822 4.9e-19 97.8 74 70.3
Migut.I01081 Erythranthe guttata HOM05D001216 ORTHO05D003822 1.0e-16 90.1 72 69.4
MSTRG.10950 Avicennia marina HOM05D001216 ORTHO05D003822 1.8e-16 89.4 77 61.0
MSTRG.22546 Avicennia marina HOM05D001216 ORTHO05D003822 3.3e-15 85.1 74 62.2
Oeu000414.1 Olea europaea HOM05D001216 ORTHO05D003822 5.6e-15 84.3 73 64.4
Dinv20429 Davidia involucrata HOM05D001216 ORTHO05D003822 9.6e-15 83.6 72 61.1
Aa31LG8G1240 Aethionema arabicum HOM05D001216 ORTHO05D003822 1.1e-13 80.1 70 58.6
THA.LOC104815622 Tarenaya hassleriana HOM05D001216 ORTHO05D003822 2.4e-13 79.0 69 60.9
Dinv37864 Davidia involucrata HOM05D001216 ORTHO05D003822 3.1e-13 78.6 72 59.7
CiPaw.01G218200 Carya illinoinensis HOM05D001216 ORTHO05D003822 4.0e-13 78.2 73 58.9
PGR102G0760 Punica granatum HOM05D001216 ORTHO05D003822 6.9e-13 77.4 68 63.2
SGA_v2.0_scaffold71G23848 Striga asiatica HOM05D001216 ORTHO05D003822 6.9e-13 77.4 71 60.6
SGA_v2.0_scaffold122G33340 Striga asiatica HOM05D001216 ORTHO05D003822 9.0e-13 77.0 74 60.8
Haze_16037 Corylus avellana HOM05D001216 ORTHO05D003822 1.2e-12 76.6 73 56.2
SalBow7G2863 Salvia bowleyana HOM05D001216 ORTHO05D003822 2.0e-12 75.9 71 60.6
Lj9A524T49 Lonicera japonica HOM05D001216 ORTHO05D003822 2.6e-12 75.5 73 58.9
Prupe.3G039700 Prunus persica HOM05D001216 ORTHO05D003822 2.6e-12 75.5 72 55.6
TPR.G13810 Trifolium pratense HOM05D001216 ORTHO05D003822 3.4e-12 75.1 79 58.2
Cfa003528 Carpinus fangiana HOM05D001216 ORTHO05D003822 4.5e-12 74.7 73 54.8
TAR383G0104 Trochodendron aralioides HOM05D001216 ORTHO05D003822 5.8e-12 74.3 73 60.3
Gohir.A05G140000 Gossypium hirsutum HOM05D001216 ORTHO05D003822 2.9e-11 72.0 75 61.3
Nn8g38635 Nelumbo nucifera HOM05D001216 ORTHO05D003822 2.9e-11 72.0 72 58.3
Aa31LG10G1280 Aethionema arabicum HOM05D001216 ORTHO05D003822 3.8e-11 71.6 69 60.9
Duzib235G0768 Durio zibethinus HOM05D001216 ORTHO05D003822 3.8e-11 71.6 81 54.3
Eucgr.J02809 Eucalyptus grandis HOM05D001216 ORTHO05D003822 3.8e-11 71.6 62 61.3
CiPaw.02G135500 Carya illinoinensis HOM05D001216 ORTHO05D003822 4.9e-11 71.2 72 55.6
THA.LOC104810369 Tarenaya hassleriana HOM05D001216 ORTHO05D003822 4.9e-11 71.2 69 59.4
Eucgr.F04408 Eucalyptus grandis HOM05D001216 ORTHO05D003822 6.5e-11 70.9 72 62.5
Glyma.16G008400 Glycine max HOM05D001216 ORTHO05D003822 6.5e-11 70.9 63 58.7
Thecc.06G121200 Theobroma cacao HOM05D001216 ORTHO05D003822 6.5e-11 70.9 75 58.7
Gohir.A10G053700 Gossypium hirsutum HOM05D001216 ORTHO05D003822 8.4e-11 70.5 81 55.6
Gohir.D05G142300 Gossypium hirsutum HOM05D001216 ORTHO05D003822 8.4e-11 70.5 74 56.8
Gorai.009G146300 Gossypium raimondii HOM05D001216 ORTHO05D003822 8.4e-11 70.5 74 56.8
CAN.G668.43 Capsicum annuum HOM05D001216 ORTHO05D003822 1.1e-10 70.1 72 55.6
AT3G14050 Arabidopsis thaliana HOM05D001216 ORTHO05D003822 1.9e-10 69.3 69 60.9
Gohir.D10G055500 Gossypium hirsutum HOM05D001216 ORTHO05D003822 1.9e-10 69.3 78 56.4
Gorai.011G059200 Gossypium raimondii HOM05D001216 ORTHO05D003822 1.9e-10 69.3 78 56.4
Glyma.07G039600 Glycine max HOM05D001216 ORTHO05D003822 2.5e-10 68.9 63 57.1
Atru.chr1.3998 Acer truncatum HOM05D001216 ORTHO05D003822 3.2e-10 68.6 66 56.1
Manes.11G019500 Manihot esculenta HOM05D001216 ORTHO05D003822 3.2e-10 68.6 75 57.3
Sabra01G0142400 Salix brachista HOM05D001216 ORTHO05D003822 3.2e-10 68.6 90 47.8
CANSAT13G0001 Cannabis sativa HOM05D001216 ORTHO05D003822 4.2e-10 68.2 72 52.8
CANSAT56G1565 Cannabis sativa HOM05D001216 ORTHO05D003822 4.2e-10 68.2 72 52.8
Manes.04G145500 Manihot esculenta HOM05D001216 ORTHO05D003822 4.2e-10 68.2 75 56.0
TWI31G1175 Tripterygium wilfordii HOM05D001216 ORTHO05D003822 4.2e-10 68.2 79 54.4
Ciclev10024989m.g Citrus clementina HOM05D001216 ORTHO05D003822 7.1e-10 67.4 71 54.9
Cc04_g01270 Coffea canephora HOM05D001216 ORTHO05D003822 7.1e-10 67.4 75 57.3
MD09G1181600 Malus domestica HOM05D001216 ORTHO05D003822 7.1e-10 67.4 70 51.4
Peaxi162Scf00038g02114 Petunia axillaris HOM05D001216 ORTHO05D003822 7.1e-10 67.4 73 53.4
Solyc03g123370.3 Solanum lycopersicum HOM05D001216 ORTHO05D003822 7.1e-10 67.4 72 54.2
VMungo0331G0428 Vigna mungo HOM05D001216 ORTHO05D003822 7.1e-10 67.4 76 55.3
Sopen03g041150 Solanum pennellii HOM05D001216 ORTHO05D003822 9.3e-10 67.0 72 54.2
PGSC0003DMG400014030 Solanum tuberosum HOM05D001216 ORTHO05D003822 9.3e-10 67.0 72 54.2
Hma1.2p1_0686F.1_g203400 Hydrangea macrophylla HOM05D001216 ORTHO05D003822 1.2e-09 66.6 70 55.7
Phvul.010G129100 Phaseolus vulgaris HOM05D001216 ORTHO05D003822 1.6e-09 66.2 74 52.7
arahy.Tifrunner.gnm1.ann1.SCHH8V Arachis hypogaea HOM05D001216 ORTHO05D003822 2.1e-09 65.9 63 61.9
arahy.Tifrunner.gnm1.ann1.SZLU9V Arachis hypogaea HOM05D001216 ORTHO05D003822 2.1e-09 65.9 63 61.9
MSTRG.9522 Avicennia marina HOM05D001216 ORTHO05D003822 4.6e-09 64.7 68 58.8
CARHR044480 Cardamine hirsuta HOM05D001216 ORTHO05D003822 4.6e-09 64.7 69 52.2
AL3G26250 Arabidopsis lyrata HOM05D001216 ORTHO05D003822 6.0e-09 64.3 68 57.4
Thhalv10011285m.g Eutrema salsugineum HOM05D001216 ORTHO05D003822 1.0e-08 63.5 69 53.6
CSS0035701 Camellia sinensis var. sinensis HOM05D001216 ORTHO05D003822 1.3e-08 63.2 72 55.6
Sp1g40580 Schrenkiella parvula HOM05D001216 ORTHO05D003822 1.3e-08 63.2 64 53.1
Actinidia21793 Actinidia chinensis HOM05D001216 ORTHO05D003822 1.8e-08 62.8 80 51.2
Ca_23389_v3 Cicer arietinum L. HOM05D001216 ORTHO05D003822 1.8e-08 62.8 81 51.9
Nitab4.5_0007255g0010 Nicotiana tabacum HOM05D001216 ORTHO05D003822 1.8e-08 62.8 74 52.7
RcHm_v2.0_Chr2g0145751 Rosa chinensis HOM05D001216 ORTHO05D003822 2.3e-08 62.4 67 49.3
COL.COLO4_30748 Corchorus olitorius HOM05D001216 ORTHO05D003822 3.0e-08 62.0 75 53.3
Thhalv10020161m.g Eutrema salsugineum HOM05D001216 ORTHO05D003822 3.0e-08 62.0 72 51.4
Actinidia26025 Actinidia chinensis HOM05D001216 ORTHO05D003822 3.9e-08 61.6 70 58.6
CARHR088880 Cardamine hirsuta HOM05D001216 ORTHO05D003822 3.9e-08 61.6 68 58.8
Sp3g12290 Schrenkiella parvula HOM05D001216 ORTHO05D003822 3.9e-08 61.6 72 52.8
Medtr8g020880 Medicago truncatula HOM05D001216 ORTHO05D003822 5.1e-08 61.2 63 55.6
Nitab4.5_0004422g0050 Nicotiana tabacum HOM05D001216 ORTHO05D003822 5.1e-08 61.2 74 54.1
Sed0012851 Sechium edule HOM05D001216 ORTHO05D003822 5.1e-08 61.2 76 51.3
ClCG09G001000 Citrullus lanatus HOM05D001216 ORTHO05D003822 6.7e-08 60.8 76 51.3
MELO3C024351.2 Cucumis melo HOM05D001216 ORTHO05D003822 6.7e-08 60.8 76 51.3
CsaV3_3G031310 Cucumis sativus L. HOM05D001216 ORTHO05D003822 8.7e-08 60.5 72 48.6
CsaV3_UNG227950 Cucumis sativus L. HOM05D001216 ORTHO05D003822 8.7e-08 60.5 72 48.6
ATR0598G350 Amborella trichopoda HOM05D001216 ORTHO05D003822 1.1e-07 60.1 73 50.7
FvH4_6g34880 Fragaria vesca HOM05D001216 ORTHO05D003822 1.1e-07 60.1 67 49.3
FAN02G1741 Fragaria x ananassa HOM05D001216 ORTHO05D003822 1.1e-07 60.1 67 49.3
FAN05G2062 Fragaria x ananassa HOM05D001216 ORTHO05D003822 1.1e-07 60.1 67 49.3
FAN09G3390 Fragaria x ananassa HOM05D001216 ORTHO05D003822 1.1e-07 60.1 67 49.3
FAN14G5102 Fragaria x ananassa HOM05D001216 ORTHO05D003822 1.1e-07 60.1 67 49.3
Potri.001G168200 Populus trichocarpa HOM05D001216 ORTHO05D003822 1.1e-07 60.1 83 45.8
Potri.003G066000 Populus trichocarpa HOM05D001216 ORTHO05D003822 1.1e-07 60.1 75 49.3
AL1G62850 Arabidopsis lyrata HOM05D001216 ORTHO05D003822 1.5e-07 59.7 64 51.6
BcaB02g10860 Brassica carinata HOM05D001216 ORTHO05D003822 1.5e-07 59.7 71 56.3
Migut.D00935 Erythranthe guttata HOM05D001216 ORTHO05D003822 1.5e-07 59.7 71 49.3
Lj9A532T69 Lonicera japonica HOM05D001216 ORTHO05D003822 1.5e-07 59.7 51 60.8
MD17G1168000 Malus domestica HOM05D001216 ORTHO05D003822 1.5e-07 59.7 70 50.0
Sabra03G0038600 Salix brachista HOM05D001216 ORTHO05D003822 1.5e-07 59.7 75 49.3
Lj3g0021321 Lotus japonicus HOM05D001216 ORTHO05D003822 1.9e-07 59.3 62 58.1
Lalb_Chr04g0263551 Lupinus albus HOM05D001216 ORTHO05D003822 3.3e-07 58.5 75 54.7
Sed0005494 Sechium edule HOM05D001216 ORTHO05D003822 4.3e-07 58.2 75 48.0
Lalb_Chr25g0281501 Lupinus albus HOM05D001216 ORTHO05D003822 7.4e-07 57.4 79 54.4
Duzib160G0167 Durio zibethinus HOM05D001216 ORTHO05D003822 9.6e-07 57.0 75 50.7
AT1G54130 Arabidopsis thaliana HOM05D001216 ORTHO05D003822 1.6e-06 56.2 64 50.0
BolC6t36753H Brassica oleracea HOM05D001216 ORTHO05D003822 1.6e-06 56.2 71 53.5
vmacro15040 Vaccinium macrocarpon HOM05D001216 ORTHO05D003822 1.6e-06 56.2 68 50.0
ClCG07G014120 Citrullus lanatus HOM05D001216 ORTHO05D003822 2.1e-06 55.8 61 50.8
C06p15660 Brassica napus HOM05D001216 ORTHO05D003822 2.8e-06 55.5 71 54.9
Carub.0001s4337 Capsella rubella HOM05D001216 ORTHO05D003822 2.8e-06 55.5 63 49.2
Carub.0003s1364 Capsella rubella HOM05D001216 ORTHO05D003822 2.8e-06 55.5 69 55.1
Rhsim12G0210000 Rhododendron simsii HOM05D001216 ORTHO05D003822 3.7e-06 55.1 70 54.3
Sc15g0000390 Simmondsia chinensis HOM05D001216 ORTHO05D003822 3.7e-06 55.1 66 48.5
CsaV3_7G034440 Cucumis sativus L. HOM05D001216 ORTHO05D003822 6.2e-06 54.3 76 48.7


User provided reference genes

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