Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 7.8e-200 700.3 358 100.0
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 4.4e-62 242.7 237 56.5
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 3.4e-54 216.5 250 50.0
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 6.4e-53 212.2 228 52.2
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.4e-52 211.1 243 48.1
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 9.3e-52 208.4 225 50.7
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 2.1e-51 207.2 225 50.2
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 3.5e-51 206.5 223 51.6
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 2.3e-50 203.8 247 47.8
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 3.0e-50 203.4 275 43.6
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 1.5e-49 201.1 226 51.8
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 3.1e-47 193.4 203 52.2
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 4.0e-47 193.0 306 39.2
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 2.7e-43 180.3 302 40.1
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 2.3e-42 177.2 237 39.2
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 3.0e-42 176.8 285 40.0
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 3.7e-40 169.9 226 45.6
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 9.0e-39 165.2 234 41.5
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 9.0e-39 165.2 192 47.9
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 1.5e-38 164.5 238 40.3
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 3.4e-38 163.3 235 43.8
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 7.6e-38 162.2 281 37.0
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 9.9e-38 161.8 234 41.9
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 3.8e-37 159.8 235 40.4
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 6.4e-37 159.1 206 43.2
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 6.4e-37 159.1 249 39.0
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 8.4e-37 158.7 250 40.0
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 1.4e-36 157.9 226 41.6
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 1.4e-36 157.9 270 37.0
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 4.2e-36 156.4 225 40.0
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 5.5e-36 156.0 259 40.9
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 7.1e-36 155.6 231 39.0
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 1.6e-35 154.5 252 39.3
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 1.6e-35 154.5 215 39.5
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 2.7e-35 153.7 232 41.4
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 1.0e-34 151.8 291 38.5
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 1.3e-34 151.4 231 39.8
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 1.3e-34 151.4 285 37.9
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 3.0e-34 150.2 248 39.1
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 3.9e-34 149.8 226 41.2
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 5.1e-34 149.4 242 38.4
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 5.1e-34 149.4 247 39.7
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 6.7e-34 149.1 214 41.6
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 6.7e-34 149.1 255 39.6
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 1.5e-33 147.9 246 38.2
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 2.5e-33 147.1 237 38.0
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 4.3e-33 146.4 296 34.8
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 4.3e-33 146.4 281 39.5
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 5.6e-33 146.0 248 37.9
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 9.6e-33 145.2 274 34.3
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 1.3e-32 144.8 232 40.1
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 1.6e-32 144.4 234 37.6
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 2.8e-32 143.7 241 38.6
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 3.7e-32 143.3 235 37.0
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 5.3e-31 139.4 216 38.4
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 2.0e-30 137.5 222 37.4
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 2.0e-30 137.5 229 38.4
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.4e-30 136.7 231 38.5
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.4e-30 136.7 231 38.5
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 5.8e-30 136.0 285 33.7
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 5.8e-30 136.0 231 38.5
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 5.8e-30 136.0 211 38.4
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 7.6e-30 135.6 283 35.7
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 1.3e-29 134.8 276 34.1
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 1.7e-29 134.4 280 34.3
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 1.7e-29 134.4 229 38.9
unitig_32.g11513 Utricularia gibba HOM05D057528 ORTHO05D030710 4.9e-29 132.9 76 86.8
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 1.9e-28 131.0 290 33.4
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 3.2e-28 130.2 216 36.1
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 1.8e-26 124.4 220 39.1
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 3.0e-26 123.6 220 38.6
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 1.5e-25 121.3 136 50.7
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 5.7e-25 119.4 307 34.2
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 2.2e-24 117.5 221 37.6
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 2.8e-24 117.1 226 37.2
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 4.8e-24 116.3 221 37.1
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 8.2e-24 115.5 297 30.6
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 1.4e-23 114.8 291 33.0
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 1.2e-22 111.7 234 33.3
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 1.2e-22 111.7 142 45.1
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 2.6e-22 110.5 237 32.5
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 7.7e-22 109.0 266 31.6
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 1.0e-21 108.6 265 33.6
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 1.3e-21 108.2 223 35.0
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 5.0e-21 106.3 219 33.3
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 5.0e-21 106.3 223 33.6
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 8.5e-21 105.5 226 32.3
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 2.5e-20 104.0 142 45.1
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 3.2e-20 103.6 137 45.3
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 7.2e-20 102.4 219 33.8
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 1.2e-19 101.7 143 40.6
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 1.0e-18 98.6 268 29.5
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 1.8e-18 97.8 207 34.8
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 1.8e-18 97.8 207 35.3
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.9e-18 96.7 143 39.9
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 3.9e-18 96.7 143 39.9
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 5.7e-17 92.8 227 31.3
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 7.4e-17 92.4 141 38.3
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 1.3e-16 91.7 227 30.8
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 1.7e-16 91.3 129 39.5
CSS0038270 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 2.6e-14 84.0 80 51.2
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 7.7e-14 82.4 172 33.1
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 2.1e-11 74.3 130 33.8
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 6.1e-11 72.8 178 31.5
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 2.6e-09 67.4 137 28.5
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 5.7e-09 66.2 129 32.6
vmacro04187 Vaccinium macrocarpon HOM05D006050 ORTHO05D030710 9.7e-09 65.5 119 38.7
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 2.2e-08 64.3 120 32.5
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 4.8e-08 63.2 97 37.1
Cpa.g.sc166.16 Carica papaya HOM05D006050 ORTHO05D007457 3.1e-07 60.5 90 40.0


User provided reference genes

Program Settings