Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11513 Utricularia gibba HOM05D057528 ORTHO05D030710 2.1e-97 359.0 179 100.0
unitig_748.g7142 Utricularia gibba HOM05D057528 ORTHO05D030710 1.7e-38 163.3 102 80.4
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 1.1e-29 134.0 76 86.8
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 7.5e-18 94.7 77 55.8
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 1.7e-17 93.6 77 55.8
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 5.4e-16 88.6 76 55.3
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 9.1e-16 87.8 71 54.9
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.2e-15 87.4 77 50.6
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 7.7e-15 84.7 78 47.4
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 7.7e-15 84.7 77 49.4
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 1.3e-14 84.0 78 50.0
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 1.3e-14 84.0 77 55.8
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 1.1e-13 80.9 77 46.8
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 1.1e-13 80.9 78 52.6
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 1.1e-13 80.9 77 53.2
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 1.1e-13 80.9 77 53.2
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 2.7e-12 76.3 82 43.9
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 4.7e-12 75.5 78 46.2
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 6.1e-12 75.1 71 45.1
CSS0038270 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 8.0e-12 74.7 74 48.6
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.8e-11 73.6 78 44.9
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 2.3e-11 73.2 53 62.3
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 3.0e-11 72.8 76 43.4
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 1.2e-10 70.9 71 49.3
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 5.7e-10 68.6 72 47.2
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 5.7e-10 68.6 80 42.5
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 9.8e-10 67.8 78 42.3
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 2.2e-09 66.6 69 44.9
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 3.7e-09 65.9 76 44.7
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 3.7e-09 65.9 69 44.9
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 4.9e-09 65.5 128 33.6
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 6.3e-09 65.1 69 43.5
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 6.3e-09 65.1 77 44.2
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 5.4e-08 62.0 78 42.3
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 5.4e-08 62.0 83 42.2
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 7.0e-08 61.6 146 34.2
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 1.6e-07 60.5 78 39.7
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 1.6e-07 60.5 83 39.8
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 1.6e-07 60.5 78 38.5
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 2.0e-07 60.1 69 43.5
vmacro04187 Vaccinium macrocarpon HOM05D006050 ORTHO05D030710 2.0e-07 60.1 73 45.2
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 2.7e-07 59.7 83 41.0
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 3.5e-07 59.3 79 43.0
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 7.7e-07 58.2 69 44.9
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 1.0e-06 57.8 78 39.7
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 1.0e-06 57.8 62 50.0
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 1.7e-06 57.0 85 37.6
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 1.7e-06 57.0 79 39.2
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 2.3e-06 56.6 115 34.8
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 2.3e-06 56.6 79 39.2
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 2.3e-06 56.6 83 39.8
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 2.3e-06 56.6 86 39.5
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 2.9e-06 56.2 125 31.2
unitig_8.g4555 Utricularia gibba HOM05D066812 ORTHO05D030710 2.9e-06 56.2 84 35.7
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 3.8e-06 55.8 81 44.4
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 3.8e-06 55.8 83 39.8
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 5.0e-06 55.5 78 41.0
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 5.0e-06 55.5 78 42.3
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 8.6e-06 54.7 83 39.8
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 8.6e-06 54.7 136 32.4
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 8.6e-06 54.7 83 39.8


User provided reference genes

Program Settings