Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11468 Utricularia gibba HOM05D002237 ORTHO05D002213 7.1e-122 440.7 229 100.0
unitig_748.g7525 Utricularia gibba HOM05D002237 ORTHO05D002213 1.4e-64 250.4 263 57.0
SalBow4G0805 Salvia bowleyana HOM05D002237 ORTHO05D002213 4.6e-20 102.4 257 35.8
MSTRG.14057 Avicennia marina HOM05D002237 ORTHO05D002213 2.3e-19 100.1 281 34.5
Oeu059606.1 Olea europaea HOM05D002237 ORTHO05D002213 2.3e-19 100.1 284 32.7
Actinidia26073 Actinidia chinensis HOM05D002237 ORTHO05D002213 8.6e-19 98.2 264 34.1
Migut.E01567 Erythranthe guttata HOM05D002237 ORTHO05D002213 5.6e-18 95.5 302 30.5
MSTRG.1684 Avicennia marina HOM05D002237 ORTHO05D002213 1.6e-17 94.0 287 32.1
Lsat_1_v5_gn_6_13421 Lactuca sativa HOM05D002237 ORTHO05D002213 2.8e-17 93.2 323 31.3
CAN.G352.21 Capsicum annuum HOM05D002237 ORTHO05D002213 4.7e-17 92.4 310 32.3
DCAR_000797 Daucus carota HOM05D002237 ORTHO05D002213 1.4e-16 90.9 267 32.6
TWI63G0889 Tripterygium wilfordii HOM05D002237 ORTHO05D002213 1.4e-16 90.9 288 31.2
Nn8g38853 Nelumbo nucifera HOM05D002237 ORTHO05D002213 2.4e-16 90.1 259 34.4
Dinv22895 Davidia involucrata HOM05D002237 ORTHO05D002213 8.9e-16 88.2 275 32.0
Sopen08g018730 Solanum pennellii HOM05D002237 ORTHO05D002213 1.2e-15 87.8 340 28.8
Migut.A00134 Erythranthe guttata HOM05D002237 ORTHO05D002213 2.0e-15 87.0 254 33.1
TWI34G0810 Tripterygium wilfordii HOM05D002237 ORTHO05D002213 2.6e-15 86.7 277 29.6
Cfa017959 Carpinus fangiana HOM05D002237 ORTHO05D002213 3.4e-15 86.3 287 28.9
SGA_v2.0_scaffold169G38695 Striga asiatica HOM05D002237 ORTHO05D002213 3.4e-15 86.3 294 30.3
TAR383G0406 Trochodendron aralioides HOM05D002237 ORTHO05D002213 2.2e-14 83.6 241 33.6
MBI01_g16600_MAGBIO Magnolia biondii HOM05D000250 ORTHO05D000625 4.9e-14 82.4 227 33.9
Solyc08g065150.1 Solanum lycopersicum HOM05D002237 ORTHO05D002213 4.9e-14 82.4 339 28.9
Gohir.D06G086900 Gossypium hirsutum HOM05D002237 ORTHO05D002213 6.4e-14 82.0 286 30.1
Gorai.010G100300 Gossypium raimondii HOM05D002237 ORTHO05D002213 6.4e-14 82.0 286 30.1
Oeu036333.1 Olea europaea HOM05D002237 ORTHO05D002213 6.4e-14 82.0 290 30.3
Thhalv10002336m.g Eutrema salsugineum HOM05D002237 ORTHO05D002213 8.4e-14 81.6 264 29.5
DCAR_004423 Daucus carota HOM05D002237 ORTHO05D002213 1.1e-13 81.3 274 28.8
MSTRG.25948 Avicennia marina HOM05D002237 ORTHO05D002213 1.4e-13 80.9 295 31.5
Hma1.2p1_0482F.1_g162400 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 1.4e-13 80.9 257 33.5
AT2G26110 Arabidopsis thaliana HOM05D002237 ORTHO05D002213 1.9e-13 80.5 266 28.9
Sp4g05990 Schrenkiella parvula HOM05D002237 ORTHO05D002213 2.4e-13 80.1 255 30.2
CARHR114840 Cardamine hirsuta HOM05D002237 ORTHO05D002213 4.2e-13 79.3 270 29.6
Cpa.g.sc7.182 Carica papaya HOM05D002237 ORTHO05D002213 4.2e-13 79.3 304 29.6
QL02p001128 Quercus lobata HOM05D002237 ORTHO05D002213 4.2e-13 79.3 308 29.5
Aa31LG5G9660 Aethionema arabicum HOM05D002237 ORTHO05D002213 7.1e-13 78.6 284 28.9
Gohir.A06G087500 Gossypium hirsutum HOM05D002237 ORTHO05D002213 7.1e-13 78.6 285 29.8
AL4G18280 Arabidopsis lyrata HOM05D002237 ORTHO05D002213 9.3e-13 78.2 265 29.4
THA.LOC104803728 Tarenaya hassleriana HOM05D002237 ORTHO05D002213 9.3e-13 78.2 276 31.9
CSS0026514 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 1.6e-12 77.4 235 32.3
RcHm_v2.0_Chr6g0310991 Rosa chinensis HOM05D002237 ORTHO05D002213 1.6e-12 77.4 294 27.6
CSS0012916 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 2.1e-12 77.0 253 30.0
SGA_v2.0_scaffold163G38027 Striga asiatica HOM05D002237 ORTHO05D002213 2.1e-12 77.0 313 29.1
Dinv27989 Davidia involucrata HOM05D002237 ORTHO05D002213 2.7e-12 76.6 260 30.0
MD15G1059100 Malus domestica HOM05D002237 ORTHO05D002213 2.7e-12 76.6 296 31.4
Peaxi162Scf01444g00003 Petunia axillaris HOM05D002237 ORTHO05D002213 2.7e-12 76.6 355 27.6
Dinv36772 Davidia involucrata HOM05D002237 ORTHO05D002213 4.6e-12 75.9 228 33.3
Nitab4.5_0001367g0050 Nicotiana tabacum HOM05D002237 ORTHO05D002213 4.6e-12 75.9 352 28.1
PGSC0003DMG400035559 Solanum tuberosum HOM05D002237 ORTHO05D002213 6.0e-12 75.5 353 27.5
ATR0749G108 Amborella trichopoda HOM05D002237 ORTHO05D002213 7.8e-12 75.1 250 30.0
MBI04_g31169_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 7.8e-12 75.1 286 26.6
Haze_18179 Corylus avellana HOM05D002237 ORTHO05D002213 1.3e-11 74.3 304 27.6
FAN15G1416 Fragaria x ananassa HOM05D002237 ORTHO05D002213 1.3e-11 74.3 287 28.9
Manes.16G080900 Manihot esculenta HOM05D002237 ORTHO05D002213 1.3e-11 74.3 300 29.3
PSO210G1183 Papaver somniferum HOM05D002237 ORTHO05D002213 1.3e-11 74.3 247 30.8
Haze_18186 Corylus avellana HOM05D002237 ORTHO05D002213 1.7e-11 73.9 306 27.1
PSO210G0663 Papaver somniferum HOM05D002237 ORTHO05D002213 3.0e-11 73.2 247 30.4
PGR031G2556 Punica granatum HOM05D002237 ORTHO05D002213 3.0e-11 73.2 324 26.9
CANSAT25G0876 Cannabis sativa HOM05D002237 ORTHO05D002213 3.9e-11 72.8 286 29.0
Duzib150G1021 Durio zibethinus HOM05D002237 ORTHO05D002213 3.9e-11 72.8 303 27.7
Sc09g0009840 Simmondsia chinensis HOM05D002237 ORTHO05D002213 3.9e-11 72.8 237 30.8
COL.COLO4_21062 Corchorus olitorius HOM05D002237 ORTHO05D002213 5.1e-11 72.4 215 31.2
Eucgr.C03051 Eucalyptus grandis HOM05D002237 ORTHO05D002213 5.1e-11 72.4 290 27.6
FAN20G2042 Fragaria x ananassa HOM05D002237 ORTHO05D002213 6.6e-11 72.0 299 27.8
Thecc.09G054200 Theobroma cacao HOM05D002237 ORTHO05D002213 6.6e-11 72.0 313 29.4
MBI04_g31173_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 8.7e-11 71.6 286 26.9
ECA233G4745 Erigeron canadensis HOM05D002237 ORTHO05D002213 1.1e-10 71.2 335 27.8
Gorai.001G022700 Gossypium raimondii HOM05D002237 ORTHO05D002213 1.1e-10 71.2 295 29.5
PSO210G3168 Papaver somniferum HOM05D002237 ORTHO05D002213 1.1e-10 71.2 248 29.4
Lsat_1_v5_gn_5_47580 Lactuca sativa HOM05D002237 ORTHO05D002213 1.5e-10 70.9 317 29.7
Lj7P270T5 Lonicera japonica HOM05D002237 ORTHO05D002213 1.5e-10 70.9 69 55.1
Manes.03G034300 Manihot esculenta HOM05D002237 ORTHO05D002213 2.5e-10 70.1 245 31.4
Potri.018G053000 Populus trichocarpa HOM05D002237 ORTHO05D002213 2.5e-10 70.1 315 27.9
MSTRG.6063 Avicennia marina HOM05D002237 ORTHO05D002213 3.3e-10 69.7 224 31.2
Carub.0004s0595 Capsella rubella HOM05D002237 ORTHO05D002213 3.3e-10 69.7 283 27.9
FAN27G2230 Fragaria x ananassa HOM05D002237 ORTHO05D002213 3.3e-10 69.7 296 28.0
HanXRQChr03g0079531 Helianthus annuus HOM05D002237 ORTHO05D002213 3.3e-10 69.7 338 27.8
Nn6g35487 Nelumbo nucifera HOM05D002237 ORTHO05D002213 3.3e-10 69.7 243 32.1
Gohir.A07G022100 Gossypium hirsutum HOM05D002237 ORTHO05D002213 4.3e-10 69.3 304 29.6
Sabra18G0048700 Salix brachista HOM05D002237 ORTHO05D002213 4.3e-10 69.3 310 28.7
PGSC0003DMG400021389 Solanum tuberosum HOM05D002237 ORTHO05D002213 4.3e-10 69.3 212 30.2
Aqoxy7G01205 Aquilegia oxysepala HOM05D002237 ORTHO05D002213 5.6e-10 68.9 258 29.5
TAR636G2243 Trochodendron aralioides HOM05D002237 ORTHO05D002213 7.3e-10 68.6 300 27.7
HanXRQChr04g0126211 Helianthus annuus HOM05D002237 ORTHO05D002213 9.6e-10 68.2 289 28.0
Prupe.1G411600 Prunus persica HOM05D002237 ORTHO05D002213 9.6e-10 68.2 302 27.5
CDE05G0947 Ceratophyllum demersum HOM05D002237 ORTHO05D002213 1.3e-09 67.8 240 30.4
Phvul.001G036100 Phaseolus vulgaris HOM05D002237 ORTHO05D002213 1.3e-09 67.8 301 28.2
Psat4g015680 Pisum sativum HOM05D002237 ORTHO05D002213 1.3e-09 67.8 230 30.9
Rhsim11G0044000 Rhododendron simsii HOM05D002237 ORTHO05D002213 1.3e-09 67.8 326 27.9
Sabra06G0177200 Salix brachista HOM05D002237 ORTHO05D002213 1.3e-09 67.8 312 26.6
Ca_21280_v3 Cicer arietinum L. HOM05D002237 ORTHO05D002213 1.6e-09 67.4 244 27.9
Nitab4.5_0000095g0170 Nicotiana tabacum HOM05D002237 ORTHO05D002213 1.6e-09 67.4 227 32.2
Gohir.D07G022000 Gossypium hirsutum HOM05D002237 ORTHO05D002213 2.1e-09 67.0 290 29.7
CiPaw.03G215600 Carya illinoinensis HOM05D002237 ORTHO05D002213 2.8e-09 66.6 234 30.8
VMungo0647G2239 Vigna mungo HOM05D002237 ORTHO05D002213 3.6e-09 66.2 304 27.0
TPR.G28379 Trifolium pratense HOM05D002237 ORTHO05D002213 4.8e-09 65.9 234 30.8
Ciclev10008860m.g Citrus clementina HOM05D002237 ORTHO05D002213 6.2e-09 65.5 327 26.3
Sopen05g016140 Solanum pennellii HOM05D002237 ORTHO05D002213 1.1e-08 64.7 213 32.4
MSTRG.19510 Avicennia marina HOM05D002237 ORTHO05D002213 1.4e-08 64.3 227 30.0
FAN24G2308 Fragaria x ananassa HOM05D002237 ORTHO05D002213 1.4e-08 64.3 306 25.2
Manes.16G101500 Manihot esculenta HOM05D002237 ORTHO05D002213 1.4e-08 64.3 239 31.4
Oeu041232.1 Olea europaea HOM05D002237 ORTHO05D002213 1.4e-08 64.3 217 32.7
THA.LOC104803792 Tarenaya hassleriana HOM05D002237 ORTHO05D002213 1.4e-08 64.3 293 29.4
BcaC03g14188 Brassica carinata HOM05D002237 ORTHO05D002213 3.1e-08 63.2 69 50.7
A02p08820 Brassica napus HOM05D002237 ORTHO05D002213 3.1e-08 63.2 69 50.7
C02p14710 Brassica napus HOM05D002237 ORTHO05D002213 3.1e-08 63.2 69 50.7
BolC2t07596H Brassica oleracea HOM05D002237 ORTHO05D002213 3.1e-08 63.2 69 50.7
BraA02t05949Z Brassica rapa HOM05D002237 ORTHO05D002213 3.1e-08 63.2 69 50.7
Hma1.2p1_0798F.1_g219850 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 3.1e-08 63.2 251 29.9
MD08G1062500 Malus domestica HOM05D002237 ORTHO05D002213 3.1e-08 63.2 263 27.4
Nitab4.5_0003939g0020 Nicotiana tabacum HOM05D002237 ORTHO05D002213 4.0e-08 62.8 70 52.9
Oeu041234.1 Olea europaea HOM05D002237 ORTHO05D002213 4.0e-08 62.8 224 30.4
Nitab4.5_0003648g0010 Nicotiana tabacum HOM05D002237 ORTHO05D002213 5.3e-08 62.4 229 31.4
HanXRQChr07g0192621 Helianthus annuus HOM05D002237 ORTHO05D002213 6.9e-08 62.0 106 39.6
Peaxi162Scf01461g00029 Petunia axillaris HOM05D002237 ORTHO05D002213 6.9e-08 62.0 233 27.9
Psat4g015560 Pisum sativum HOM05D002237 ORTHO05D002213 6.9e-08 62.0 254 28.3
Potri.006G228800 Populus trichocarpa HOM05D002237 ORTHO05D002213 6.9e-08 62.0 313 25.6
CsaV3_1G040530 Cucumis sativus L. HOM05D002237 ORTHO05D002213 9.0e-08 61.6 225 28.4
FvH4_2g31830 Fragaria vesca HOM05D002237 ORTHO05D002213 9.0e-08 61.6 306 25.2
Sed0011201 Sechium edule HOM05D002237 ORTHO05D002213 9.0e-08 61.6 238 32.4
SEGI_13547 Sequoiadendron giganteum HOM05D002237 ORTHO05D002213 9.0e-08 61.6 225 29.3
Psat4g015760 Pisum sativum HOM05D002237 ORTHO05D002213 1.5e-07 60.8 252 28.6
THA.LOC104811745 Tarenaya hassleriana HOM05D002237 ORTHO05D002213 1.5e-07 60.8 61 55.7
MBI04_g31168_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 2.0e-07 60.5 78 46.2
BcaB05g22304 Brassica carinata HOM05D002237 ORTHO05D002213 2.6e-07 60.1 69 49.3
Gohir.A13G193300 Gossypium hirsutum HOM05D002237 ORTHO05D002213 2.6e-07 60.1 256 27.7
Medtr2g039320 Medicago truncatula HOM05D002237 ORTHO05D002213 3.4e-07 59.7 234 29.1
HanXRQChr03g0060491 Helianthus annuus HOM05D002237 ORTHO05D002213 4.4e-07 59.3 268 26.9
Solyc05g018820.1 Solanum lycopersicum HOM05D002237 ORTHO05D002213 4.4e-07 59.3 213 31.9
CDE05G2600 Ceratophyllum demersum HOM05D002237 ORTHO05D002213 5.8e-07 58.9 243 29.6
SGA_v2.0_scaffold62G21613 Striga asiatica HOM05D002237 ORTHO05D002213 5.8e-07 58.9 58 51.7
AL52U10060 Arabidopsis lyrata HOM05D002237 ORTHO05D002213 7.6e-07 58.5 58 55.2
AL8G32850 Arabidopsis lyrata HOM05D002237 ORTHO05D002213 7.6e-07 58.5 58 55.2
Thhalv10013847m.g Eutrema salsugineum HOM05D002237 ORTHO05D002213 7.6e-07 58.5 69 47.8
Carub.0008s1746 Capsella rubella HOM05D002237 ORTHO05D002213 9.9e-07 58.2 58 55.2
MELO3C015480.2 Cucumis melo HOM05D002237 ORTHO05D002213 9.9e-07 58.2 230 29.6
MBI04_g31165_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 9.9e-07 58.2 290 25.5
TAR626G0565 Trochodendron aralioides HOM05D001162 ORTHO05D001218 9.9e-07 58.2 74 50.0
AT5G56980 Arabidopsis thaliana HOM05D002237 ORTHO05D002213 1.3e-06 57.8 70 50.0
CARHR270720 Cardamine hirsuta HOM05D002237 ORTHO05D002213 1.3e-06 57.8 65 50.8
Gohir.A07G011600 Gossypium hirsutum HOM05D002237 ORTHO05D002213 1.3e-06 57.8 250 28.0
ClCG03G015520 Citrullus lanatus HOM05D002237 ORTHO05D002213 1.7e-06 57.4 239 27.6
Ciclev10009087m.g Citrus clementina HOM05D002237 ORTHO05D002213 1.7e-06 57.4 283 27.9
Glyma.14G095300 Glycine max HOM05D002237 ORTHO05D002213 1.7e-06 57.4 71 49.3
HanXRQChr06g0178571 Helianthus annuus HOM05D002237 ORTHO05D002213 1.7e-06 57.4 294 24.8
Lj5g0000472 Lotus japonicus HOM05D002237 ORTHO05D002213 1.7e-06 57.4 70 50.0
Oeu041233.1 Olea europaea HOM05D002237 ORTHO05D002213 1.7e-06 57.4 212 32.1
Aa31LG3G12870 Aethionema arabicum HOM05D002237 ORTHO05D002213 2.2e-06 57.0 59 52.5
Lalb_Chr22g0356091 Lupinus albus HOM05D002237 ORTHO05D002213 2.2e-06 57.0 69 49.3
Medtr1g016100 Medicago truncatula HOM05D002237 ORTHO05D002213 2.2e-06 57.0 301 26.6
Actinidia39714 Actinidia chinensis HOM05D002237 ORTHO05D002213 2.9e-06 56.6 248 29.8
CiPaw.03G215700 Carya illinoinensis HOM05D002237 ORTHO05D002213 2.9e-06 56.6 233 29.2
Eucgr.C00651 Eucalyptus grandis HOM05D002237 ORTHO05D002213 2.9e-06 56.6 331 26.3
Lj7A676T37 Lonicera japonica HOM05D002237 ORTHO05D002213 2.9e-06 56.6 55 56.4
MELO3C016871.2 Cucumis melo HOM05D002237 ORTHO05D002213 3.8e-06 56.2 69 49.3
Peaxi162Scf00259g00111 Petunia axillaris HOM05D002237 ORTHO05D002213 3.8e-06 56.2 223 26.9
Sp6g18690 Schrenkiella parvula HOM05D002237 ORTHO05D002213 3.8e-06 56.2 58 53.4
Sed0018033 Sechium edule HOM05D002237 ORTHO05D002213 3.8e-06 56.2 69 47.8
ECA236G2512 Erigeron canadensis HOM05D002237 ORTHO05D002213 4.9e-06 55.8 51 60.8
Gohir.D07G011400 Gossypium hirsutum HOM05D002237 ORTHO05D002213 4.9e-06 55.8 250 28.0
Gorai.001G012100 Gossypium raimondii HOM05D002237 ORTHO05D002213 4.9e-06 55.8 250 28.0
Phvul.009G232000 Phaseolus vulgaris HOM05D002237 ORTHO05D002213 4.9e-06 55.8 260 24.2
ClCG05G017870 Citrullus lanatus HOM05D002237 ORTHO05D002213 6.4e-06 55.5 69 47.8
CsaV3_4G035640 Cucumis sativus L. HOM05D002237 ORTHO05D002213 6.4e-06 55.5 69 47.8
Oeu041231.1 Olea europaea HOM05D002237 ORTHO05D002213 6.4e-06 55.5 212 32.5
TAR624G1451 Trochodendron aralioides HOM05D002237 ORTHO05D002213 6.4e-06 55.5 74 48.6
CiPaw.15G038600 Carya illinoinensis HOM05D002237 ORTHO05D002213 8.4e-06 55.1 71 47.9
Oeu016763.1 Olea europaea HOM05D002237 ORTHO05D002213 8.4e-06 55.1 54 51.9
Thecc.09G088400 Theobroma cacao HOM05D002237 ORTHO05D002213 8.4e-06 55.1 45 62.2


User provided reference genes

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