Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11240 Utricularia gibba HOM05D000901 ORTHO05D004766 1.8e-136 489.2 243 100.0
Migut.C00891 Erythranthe guttata HOM05D000901 ORTHO05D004766 9.0e-75 284.3 205 62.9
SGA_v2.0_scaffold145G36086 Striga asiatica HOM05D000901 ORTHO05D004766 4.9e-73 278.5 206 64.1
Nitab4.5_0001936g0050 Nicotiana tabacum HOM05D000901 ORTHO05D004766 3.9e-70 268.9 220 56.8
Lj4A800T39 Lonicera japonica HOM05D000901 ORTHO05D004766 1.1e-69 267.3 212 58.5
Nitab4.5_0002730g0020 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.9e-69 266.5 220 55.5
Peaxi162Scf00064g00828 Petunia axillaris HOM05D000901 ORTHO05D004766 3.3e-69 265.8 192 60.4
Nitab4.5_0000498g0060 Nicotiana tabacum HOM05D000901 ORTHO05D004766 7.4e-69 264.6 211 57.3
SalBow7G4280 Salvia bowleyana HOM05D000901 ORTHO05D004766 7.4e-69 264.6 216 59.7
MSTRG.1154 Avicennia marina HOM05D000901 ORTHO05D004766 9.7e-69 264.2 212 61.3
MSTRG.1155 Avicennia marina HOM05D000901 ORTHO05D004766 1.3e-68 263.8 212 60.8
Peaxi162Scf00289g00084 Petunia axillaris HOM05D000901 ORTHO05D004766 1.3e-68 263.8 208 56.7
Sopen12g031250 Solanum pennellii HOM05D000901 ORTHO05D004766 2.0e-66 256.5 203 59.1
PGSC0003DMG400029329 Solanum tuberosum HOM05D000901 ORTHO05D004766 2.0e-66 256.5 217 52.1
CAN.G1517.1 Capsicum annuum HOM05D000901 ORTHO05D004766 4.5e-66 255.4 189 59.3
Solyc12g094380.2 Solanum lycopersicum HOM05D000901 ORTHO05D004766 5.0e-65 251.9 219 52.5
Sopen12g031260 Solanum pennellii HOM05D000901 ORTHO05D004766 1.1e-64 250.8 203 56.7
Aqoxy5G01833 Aquilegia oxysepala HOM05D000901 ORTHO05D004766 9.4e-64 247.7 212 53.8
Oeu048721.1 Olea europaea HOM05D000901 ORTHO05D004766 9.4e-64 247.7 206 56.8
vmacro21856 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 1.4e-62 243.8 223 52.0
Nn6g31933 Nelumbo nucifera HOM05D000901 ORTHO05D004766 3.0e-62 242.7 204 54.9
Potri.005G244400 Populus trichocarpa HOM05D000901 ORTHO05D004766 3.0e-62 242.7 222 54.1
Cc10_g01220 Coffea canephora HOM05D000901 ORTHO05D004766 5.1e-62 241.9 212 55.7
DCAR_013891 Daucus carota HOM05D000901 ORTHO05D004766 5.1e-62 241.9 208 54.3
TAR381G0201 Trochodendron aralioides HOM05D000901 ORTHO05D004766 1.5e-61 240.4 196 55.6
CSS0047191 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 2.0e-61 240.0 207 53.6
CSS0049889 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 2.0e-61 240.0 207 53.6
HanXRQChr06g0184521 Helianthus annuus HOM05D000901 ORTHO05D004766 2.0e-61 240.0 214 53.7
PSO063G0231 Papaver somniferum HOM05D000901 ORTHO05D004766 4.3e-61 238.8 199 55.8
arahy.Tifrunner.gnm1.ann1.774XMB Arachis hypogaea HOM05D000901 ORTHO05D004766 5.7e-61 238.4 209 54.1
Hund01706 Selenicereus undatus HOM05D000901 ORTHO05D004766 7.4e-61 238.0 215 54.0
Sabra05G0189000 Salix brachista HOM05D000901 ORTHO05D004766 1.3e-60 237.3 215 54.0
AUR62036698 Chenopodium quinoa HOM05D000901 ORTHO05D004766 2.2e-60 236.5 223 52.0
COL.COLO4_26098 Corchorus olitorius HOM05D000901 ORTHO05D004766 2.2e-60 236.5 194 53.6
Hund05158 Selenicereus undatus HOM05D000901 ORTHO05D004766 2.2e-60 236.5 226 51.3
Hund05161 Selenicereus undatus HOM05D000901 ORTHO05D004766 2.2e-60 236.5 226 51.3
HanXRQChr14g0429411 Helianthus annuus HOM05D000901 ORTHO05D004766 3.7e-60 235.7 209 54.5
arahy.Tifrunner.gnm1.ann1.K685T3 Arachis hypogaea HOM05D000901 ORTHO05D004766 4.8e-60 235.3 209 53.6
GSVIVG01008758001 Vitis vinifera HOM05D000901 ORTHO05D004766 4.8e-60 235.3 215 53.5
Manes.05G143600 Manihot esculenta HOM05D000901 ORTHO05D004766 6.3e-60 235.0 188 58.0
Cfa013996 Carpinus fangiana HOM05D000901 ORTHO05D004766 8.2e-60 234.6 206 52.4
MELO3C011351.2 Cucumis melo HOM05D000901 ORTHO05D004766 1.1e-59 234.2 205 54.6
DCAR_013892 Daucus carota HOM05D000901 ORTHO05D004766 1.4e-59 233.8 212 51.9
Sc15g0004710 Simmondsia chinensis HOM05D000901 ORTHO05D004766 1.4e-59 233.8 215 54.9
CiPaw.07G144500 Carya illinoinensis HOM05D000901 ORTHO05D004766 1.8e-59 233.4 203 54.2
Ciclev10002332m.g Citrus clementina HOM05D000901 ORTHO05D004766 1.8e-59 233.4 194 54.1
Lalb_Chr11g0061781 Lupinus albus HOM05D000901 ORTHO05D004766 2.4e-59 233.0 207 52.7
Hund05157 Selenicereus undatus HOM05D000901 ORTHO05D004766 2.4e-59 233.0 228 51.3
Hund05162 Selenicereus undatus HOM05D000901 ORTHO05D004766 2.4e-59 233.0 228 51.3
Thecc.08G049900 Theobroma cacao HOM05D000901 ORTHO05D004766 2.4e-59 233.0 188 55.9
PSO782G4846 Papaver somniferum HOM05D000901 ORTHO05D004766 4.1e-59 232.3 198 55.1
vmacro04376 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 4.1e-59 232.3 207 54.1
Sed0006708 Sechium edule HOM05D000901 ORTHO05D004766 9.1e-59 231.1 206 54.4
CsaV3_2G024310 Cucumis sativus L. HOM05D000901 ORTHO05D004766 1.5e-58 230.3 223 49.3
MBI05_g36763_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 1.5e-58 230.3 195 56.4
CSS0010771 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 2.0e-58 229.9 195 52.3
TWI56G0802 Tripterygium wilfordii HOM05D000901 ORTHO05D004766 2.6e-58 229.6 219 51.1
EL10Ac1g02116 Beta vulgaris HOM05D000901 ORTHO05D004766 3.4e-58 229.2 204 52.5
ECA238G3494 Erigeron canadensis HOM05D000901 ORTHO05D004766 3.4e-58 229.2 201 52.7
Actinidia37946 Actinidia chinensis HOM05D000901 ORTHO05D004766 5.9e-58 228.4 193 53.9
Lj4A18T108 Lonicera japonica HOM05D000901 ORTHO05D004766 5.9e-58 228.4 207 51.7
Sp5g31130 Schrenkiella parvula HOM05D000901 ORTHO05D004766 5.9e-58 228.4 217 52.1
Phvul.009G019200 Phaseolus vulgaris HOM05D000901 ORTHO05D004766 7.7e-58 228.0 211 53.1
Duzib041G0373 Durio zibethinus HOM05D000901 ORTHO05D004766 1.3e-57 227.3 194 53.1
FvH4_2g38030 Fragaria vesca HOM05D000901 ORTHO05D004766 2.9e-57 226.1 209 52.2
Potri.002G017500 Populus trichocarpa HOM05D000901 ORTHO05D004766 2.9e-57 226.1 191 55.0
Glyma.04G021400 Glycine max HOM05D000901 ORTHO05D004766 3.8e-57 225.7 209 51.7
MD08G1008700 Malus domestica HOM05D000901 ORTHO05D004766 3.8e-57 225.7 217 50.7
Gorai.010G001700 Gossypium raimondii HOM05D000901 ORTHO05D004766 5.0e-57 225.3 219 47.0
Thhalv10019591m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 8.5e-57 224.6 205 53.2
Lsat_1_v5_gn_2_7381 Lactuca sativa HOM05D000901 ORTHO05D004766 8.5e-57 224.6 210 53.3
BraA02t07071Z Brassica rapa HOM05D000901 ORTHO05D004766 1.1e-56 224.2 211 52.6
ClCG08G014120 Citrullus lanatus HOM05D000901 ORTHO05D004766 1.1e-56 224.2 209 51.7
RcHm_v2.0_Chr6g0303571 Rosa chinensis HOM05D000901 ORTHO05D004766 2.5e-56 223.0 207 49.8
BcaC03g15640 Brassica carinata HOM05D000901 ORTHO05D004766 3.2e-56 222.6 216 50.9
ATR0661G262 Amborella trichopoda HOM05D000901 ORTHO05D004766 5.5e-56 221.9 208 52.9
BolC2t09354H Brassica oleracea HOM05D000901 ORTHO05D004766 7.2e-56 221.5 210 52.4
A02p20390 Brassica napus HOM05D000901 ORTHO05D004766 9.4e-56 221.1 211 51.7
Thecc.08G050000 Theobroma cacao HOM05D000901 ORTHO05D004766 9.4e-56 221.1 194 51.0
Glyma.04G021300 Glycine max HOM05D000901 ORTHO05D004766 1.6e-55 220.3 209 50.2
TPR.G9568 Trifolium pratense HOM05D000901 ORTHO05D004766 2.1e-55 219.9 191 51.8
C02p33510 Brassica napus HOM05D000901 ORTHO05D004766 2.7e-55 219.5 205 52.2
Medtr0332s0020 Medicago truncatula HOM05D000901 ORTHO05D004766 4.7e-55 218.8 216 50.9
FAN20G3106 Fragaria x ananassa HOM05D000901 ORTHO05D004766 6.1e-55 218.4 205 51.7
Prupe.1G360400 Prunus persica HOM05D000901 ORTHO05D004766 6.1e-55 218.4 208 49.0
Lj1g0003310 Lotus japonicus HOM05D000901 ORTHO05D004766 1.0e-54 217.6 205 51.7
Ca_11598_v3 Cicer arietinum L. HOM05D000901 ORTHO05D004766 1.8e-54 216.9 195 50.8
VMungo1309G2869 Vigna mungo HOM05D002716 ORTHO05D003324 3.9e-54 215.7 209 50.7
Ah.00g000720 Amaranthus hybridus HOM05D000901 ORTHO05D004766 6.7e-54 214.9 199 52.3
CANSAT25G0446 Cannabis sativa HOM05D000901 ORTHO05D004766 6.7e-54 214.9 214 49.1
CARHR069550 Cardamine hirsuta HOM05D000901 ORTHO05D004766 6.7e-54 214.9 204 52.0
MD15G1007500 Malus domestica HOM05D000901 ORTHO05D004766 8.8e-54 214.5 214 47.7
Eucgr.F03719 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.1e-53 214.2 209 48.8
PGR031G2145 Punica granatum HOM05D000901 ORTHO05D004766 1.5e-53 213.8 192 50.5
AT1G76020 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 2.0e-53 213.4 205 50.7
Cpa.g.sc26.277 Carica papaya HOM05D000901 ORTHO05D004766 3.3e-53 212.6 194 48.5
CDE09G0289 Ceratophyllum demersum HOM05D000901 ORTHO05D004766 4.4e-53 212.2 189 53.4
HPP92_022203 Vanilla planifolia HOM05D000901 ORTHO05D004766 4.4e-53 212.2 190 52.6
DCAR_025124 Daucus carota HOM05D000901 ORTHO05D004766 5.7e-53 211.8 209 50.7
Eucgr.F01691 Eucalyptus grandis HOM05D000901 ORTHO05D004766 5.7e-53 211.8 188 52.1
Gohir.A06G001500 Gossypium hirsutum HOM05D000901 ORTHO05D004766 1.3e-52 210.7 175 54.3
THA.LOC104813773 Tarenaya hassleriana HOM05D000901 ORTHO05D004766 2.8e-52 209.5 195 49.2
Nn5g30828 Nelumbo nucifera HOM05D000901 ORTHO05D004766 3.7e-52 209.1 192 50.0
Carub.0002s2290 Capsella rubella HOM05D000901 ORTHO05D004766 4.8e-52 208.8 214 48.1
QL02p012636 Quercus lobata HOM05D000901 ORTHO05D004766 1.8e-51 206.8 230 44.3
AUR62013896 Chenopodium quinoa HOM05D000901 ORTHO05D004766 2.4e-51 206.5 198 49.0
HPP92_026881 Vanilla planifolia HOM05D000901 ORTHO05D004766 2.4e-51 206.5 189 51.9
PGR083G1908 Punica granatum HOM05D000901 ORTHO05D004766 4.1e-51 205.7 205 50.7
AT1G20225 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 7.0e-51 204.9 215 46.5
Sp1g17990 Schrenkiella parvula HOM05D000901 ORTHO05D004766 9.1e-51 204.5 216 46.3
C05p18770 Brassica napus HOM05D000901 ORTHO05D004766 1.2e-50 204.1 216 45.8
Psat7g082200 Pisum sativum HOM05D000901 ORTHO05D004766 1.2e-50 204.1 189 48.1
HPP92_025437 Vanilla planifolia HOM05D000901 ORTHO05D004766 1.2e-50 204.1 203 49.8
CARHR020720 Cardamine hirsuta HOM05D000901 ORTHO05D004766 2.0e-50 203.4 215 45.1
HPP92_003483 Vanilla planifolia HOM05D000901 ORTHO05D004766 2.6e-50 203.0 189 50.8
Aa31LG4G6150 Aethionema arabicum HOM05D000901 ORTHO05D004766 4.5e-50 202.2 206 50.0
SGA_v2.0_scaffold292G47381 Striga asiatica HOM05D000901 ORTHO05D004766 4.5e-50 202.2 205 50.7
A07p41510 Brassica napus HOM05D000901 ORTHO05D004766 5.9e-50 201.8 218 48.2
BcaB07g32030 Brassica carinata HOM05D000901 ORTHO05D004766 7.7e-50 201.4 218 44.0
BcaC08g47093 Brassica carinata HOM05D000901 ORTHO05D004766 7.7e-50 201.4 205 49.3
BolC5t30582H Brassica oleracea HOM05D000901 ORTHO05D004766 1.3e-49 200.7 216 44.9
C06p49920 Brassica napus HOM05D000901 ORTHO05D004766 1.7e-49 200.3 212 46.2
BcaC05g25925 Brassica carinata HOM05D000901 ORTHO05D004766 2.2e-49 199.9 210 45.7
Carub.0001s1975 Capsella rubella HOM05D000901 ORTHO05D004766 2.2e-49 199.9 210 45.7
BraA06t24738Z Brassica rapa HOM05D000901 ORTHO05D004766 3.8e-49 199.1 216 44.4
Os04g0227500 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 5.0e-49 198.7 225 46.7
A06p16340 Brassica napus HOM05D000901 ORTHO05D004766 6.5e-49 198.4 217 44.2
AL1G33070 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 8.5e-49 198.0 216 45.4
Nitab4.5_0010135g0010 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.5e-48 197.2 202 48.5
BcaC08g47306 Brassica carinata HOM05D000901 ORTHO05D004766 2.5e-48 196.4 212 45.8
BcaC08g47307 Brassica carinata HOM05D000901 ORTHO05D004766 2.5e-48 196.4 212 45.8
Zm00001eb103900 Zea mays HOM05D000901 ORTHO05D004766 1.6e-47 193.7 194 49.5
BraA07t31683Z Brassica rapa HOM05D000901 ORTHO05D004766 6.1e-47 191.8 229 43.2
Os09g0542200 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 8.0e-47 191.4 194 47.9
BolC6t40030H Brassica oleracea HOM05D000901 ORTHO05D004766 1.8e-46 190.3 230 42.6
Aa31LG7G4620 Aethionema arabicum HOM05D000901 ORTHO05D004766 2.3e-46 189.9 219 43.8
SEGI_34166 Sequoiadendron giganteum HOM05D000901 ORTHO05D004766 3.7e-44 182.6 219 43.8
SMO137G0357 Selaginella moellendorffii HOM05D000901 ORTHO05D004766 3.5e-42 176.0 206 42.7
Rhsim06G0013400 Rhododendron simsii HOM05D000901 ORTHO05D004766 1.1e-40 171.0 177 48.0
FAN27G1122 Fragaria x ananassa HOM05D000901 ORTHO05D001160 1.0e-38 164.5 170 47.6
Psat7g082240 Pisum sativum HOM05D000901 ORTHO05D004766 1.7e-36 157.1 136 53.7
Dinv31885 Davidia involucrata HOM05D000901 ORTHO05D001160 2.2e-36 156.8 127 55.9
Thhalv10010046m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 2.8e-36 156.4 168 46.4
Actinidia29763 Actinidia chinensis HOM05D000901 ORTHO05D004766 2.4e-35 153.3 200 42.5
MSTRG.25272 Avicennia marina HOM05D000901 ORTHO05D004766 4.1e-35 152.5 111 64.9
Rhsim07G0249300 Rhododendron simsii HOM05D000901 ORTHO05D004766 5.3e-35 152.1 196 40.8
MBI05_g08641_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 1.6e-34 150.6 142 51.4
Pp3c23_11410 Physcomitrium patens HOM05D000901 ORTHO05D004766 1.3e-33 147.5 203 37.9
Mapoly0103s0033 Marchantia polymorpha HOM05D000901 ORTHO05D004766 1.5e-32 144.1 210 38.1
Oeu048720.1 Olea europaea HOM05D000901 ORTHO05D004766 1.6e-31 140.6 95 66.3
MBI05_g19938_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 1.7e-28 130.6 133 49.6
BolC1t01801H Brassica oleracea HOM05D000901 ORTHO05D004766 4.1e-27 125.9 114 52.6
Zm00001eb419520 Zea mays HOM05D000901 ORTHO05D004766 1.6e-26 124.0 142 45.1
Lj2g0002110 Lotus japonicus HOM05D000901 ORTHO05D004766 1.0e-25 121.3 137 44.5
AL2G36040 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 1.3e-25 120.9 127 48.0
Eucgr.L01283 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.2e-23 114.4 103 52.4
FAN15G2950 Fragaria x ananassa HOM05D000901 ORTHO05D001160 1.6e-23 114.0 170 37.6
MBI05_g47803_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 4.0e-22 109.4 150 41.3
Haze_22688 Corylus avellana HOM05D000901 ORTHO05D004766 5.2e-22 109.0 97 48.5
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 4.4e-21 105.9 104 48.1
CBR_g10910 Chara braunii HOM05D000901 ORTHO05D004766 4.4e-21 105.9 174 36.8
AagrBONN_evm.TU.Sc2ySwM_228.1931 Anthoceros agrestis HOM05D000901 ORTHO05D004766 7.5e-21 105.1 150 37.3
BcaC01g02788 Brassica carinata HOM05D000901 ORTHO05D004766 2.0e-18 97.1 110 42.7
C03p50790 Brassica napus HOM05D000901 ORTHO05D004766 4.5e-18 95.9 110 41.8
BcaC09g50963 Brassica carinata HOM05D000901 ORTHO05D004766 5.9e-18 95.5 88 51.1
BolC6t40031H Brassica oleracea HOM05D000901 ORTHO05D004766 2.3e-17 93.6 138 37.0
AUR62036699 Chenopodium quinoa HOM05D000901 ORTHO05D004766 1.6e-15 87.4 103 40.8
C07p15020 Brassica napus HOM05D000901 ORTHO05D004766 2.8e-15 86.7 101 41.6
CiPaw.07G144400 Carya illinoinensis HOM05D000901 ORTHO05D004766 6.1e-15 85.5 84 46.4
Ciclev10027478m.g Citrus clementina HOM05D000901 ORTHO05D004766 8.9e-14 81.6 86 45.3
Rhsim07G0249200 Rhododendron simsii HOM05D000901 ORTHO05D004766 8.9e-14 81.6 61 57.4
BolC6t37476H Brassica oleracea HOM05D000901 ORTHO05D004766 1.3e-12 77.8 89 40.4
Haze_22689 Corylus avellana HOM05D000901 ORTHO05D004766 8.3e-12 75.1 109 37.6
C03p60410 Brassica napus HOM05D000901 ORTHO05D004766 3.2e-11 73.2 85 41.2
BolC3t18302H Brassica oleracea HOM05D000901 ORTHO05D004766 5.0e-09 65.9 77 40.3
BcaC09g50962 Brassica carinata HOM05D000901 ORTHO05D004766 2.5e-08 63.5 56 51.8
Eucgr.H01097 Eucalyptus grandis HOM05D000901 ORTHO05D004766 2.1e-07 60.5 55 43.6


User provided reference genes

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