Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11168 Utricularia gibba HOM05D005414 ORTHO05D006844 3.4e-133 478.4 251 100.0
SGA_v2.0_scaffold188G40302 Striga asiatica HOM05D005414 ORTHO05D006844 9.3e-83 310.8 247 65.6
SalBow7G3693 Salvia bowleyana HOM05D005414 ORTHO05D006844 1.1e-80 303.9 237 65.8
Migut.C00158 Erythranthe guttata HOM05D005414 ORTHO05D006844 5.3e-78 295.0 241 63.1
Solyc04g072050.4 Solanum lycopersicum HOM05D005414 ORTHO05D006844 1.3e-76 290.4 246 60.6
Sopen04g028220 Solanum pennellii HOM05D005414 ORTHO05D006844 1.3e-76 290.4 246 60.6
PGSC0003DMG400031145 Solanum tuberosum HOM05D005414 ORTHO05D006844 1.3e-76 290.4 246 60.2
MSTRG.24938 Avicennia marina HOM05D005414 ORTHO05D006844 1.2e-74 283.9 232 63.4
Ciclev10002272m.g Citrus clementina HOM05D005414 ORTHO05D006844 3.0e-73 279.3 245 57.6
Cc10_g06420 Coffea canephora HOM05D005414 ORTHO05D006844 8.7e-73 277.7 237 57.8
CSS0029717 Camellia sinensis var. sinensis HOM05D005414 ORTHO05D006844 3.7e-71 272.3 237 59.5
Lj5g0014662 Lotus japonicus HOM05D005414 ORTHO05D006844 3.7e-71 272.3 244 57.4
CSS0025663 Camellia sinensis var. sinensis HOM05D005414 ORTHO05D006844 4.8e-71 271.9 237 59.1
Actinidia17760 Actinidia chinensis HOM05D005414 ORTHO05D006844 1.1e-70 270.8 242 56.6
Atru.chr13.1979 Acer truncatum HOM05D005414 ORTHO05D006844 1.2e-69 267.3 244 56.6
Psat6g189560 Pisum sativum HOM05D005414 ORTHO05D006844 2.0e-69 266.5 240 55.8
TPR.G17052 Trifolium pratense HOM05D005414 ORTHO05D006844 7.6e-69 264.6 240 56.2
Lalb_Chr02g0141631 Lupinus albus HOM05D005414 ORTHO05D006844 1.3e-68 263.8 245 53.1
Peaxi162Scf00226g00114 Petunia axillaris HOM05D005414 ORTHO05D006844 1.3e-68 263.8 264 53.8
Sabra05G0151200 Salix brachista HOM05D005414 ORTHO05D006844 1.3e-68 263.8 237 56.1
Prupe.8G044100 Prunus persica HOM05D005414 ORTHO05D006844 2.2e-68 263.1 239 57.7
Glyma.20G171300 Glycine max HOM05D005414 ORTHO05D006844 2.9e-68 262.7 245 54.7
Medtr1g097430 Medicago truncatula HOM05D005414 ORTHO05D006844 1.1e-67 260.8 235 55.3
VMungo0720G1060 Vigna mungo HOM05D005414 ORTHO05D006844 1.4e-67 260.4 240 55.0
MD10G1038100 Malus domestica HOM05D005414 ORTHO05D006844 1.9e-67 260.0 244 56.1
arahy.Tifrunner.gnm1.ann1.X1PAW1 Arachis hypogaea HOM05D005414 ORTHO05D006844 3.2e-67 259.2 236 57.6
Phvul.007G085100 Phaseolus vulgaris HOM05D005414 ORTHO05D006844 7.2e-67 258.1 248 54.0
Oeu061453.3 Olea europaea HOM05D005414 ORTHO05D006844 9.3e-67 257.7 206 64.1
Potri.002G062600 Populus trichocarpa HOM05D005414 ORTHO05D006844 1.2e-66 257.3 238 58.4
arahy.Tifrunner.gnm1.ann1.66PYZ2 Arachis hypogaea HOM05D005414 ORTHO05D006844 1.6e-66 256.9 236 57.2
CiPaw.16G007400 Carya illinoinensis HOM05D005414 ORTHO05D006844 1.3e-65 253.8 238 55.5
RcHm_v2.0_Chr6g0273701 Rosa chinensis HOM05D005414 ORTHO05D006844 1.3e-65 253.8 239 55.6
Rhsim06G0093200 Rhododendron simsii HOM05D005414 ORTHO05D006844 3.0e-65 252.7 237 55.3
Gohir.A06G116400 Gossypium hirsutum HOM05D005414 ORTHO05D006844 5.1e-65 251.9 246 54.5
Eucgr.F02672 Eucalyptus grandis HOM05D005414 ORTHO05D006844 8.7e-65 251.1 241 54.8
FvH4_2g12810 Fragaria vesca HOM05D005414 ORTHO05D006844 8.7e-65 251.1 239 56.9
Phvul.007G085000 Phaseolus vulgaris HOM05D005414 ORTHO05D006844 1.1e-64 250.8 245 53.9
Hma1.2p1_2282F.1_g318850 Hydrangea macrophylla HOM05D005414 ORTHO05D006844 1.5e-64 250.4 237 55.7
Gorai.010G131400 Gossypium raimondii HOM05D005414 ORTHO05D006844 1.9e-64 250.0 239 55.6
HanXRQChr05g0144171 Helianthus annuus HOM05D005414 ORTHO05D006844 7.4e-64 248.1 243 51.4
Duzib041G0057 Durio zibethinus HOM05D005414 ORTHO05D006844 1.3e-63 247.3 238 53.8
Gohir.D06G114900 Gossypium hirsutum HOM05D005414 ORTHO05D006844 1.3e-63 247.3 246 54.1
FAN27G1467 Fragaria x ananassa HOM05D005414 ORTHO05D006844 2.8e-63 246.1 239 55.6
GSVIVG01013697001 Vitis vinifera HOM05D005414 ORTHO05D006844 3.7e-63 245.7 217 58.5
Thecc.08G163500 Theobroma cacao HOM05D005414 ORTHO05D006844 1.4e-62 243.8 243 52.7
THA.LOC104809748 Tarenaya hassleriana HOM05D005414 ORTHO05D006844 4.1e-62 242.3 251 52.2
Solyc04g072031.1 Solanum lycopersicum HOM05D005414 ORTHO05D006844 6.9e-62 241.5 203 59.6
PGR042G0638 Punica granatum HOM05D005414 ORTHO05D006844 3.4e-61 239.2 242 51.2
ECA232G1443 Erigeron canadensis HOM05D005414 ORTHO05D006844 5.0e-60 235.3 246 50.4
Manes.18G096200 Manihot esculenta HOM05D005414 ORTHO05D006844 6.5e-60 235.0 207 59.9
CAN.G564.21 Capsicum annuum HOM05D005414 ORTHO05D006844 1.1e-59 234.2 195 61.0
Glyma.20G171400 Glycine max HOM05D005414 ORTHO05D006844 1.1e-59 234.2 247 49.8
Sc26g0002600 Simmondsia chinensis HOM05D005414 ORTHO05D006844 1.4e-59 233.8 244 47.5
PSO170G2436 Papaver somniferum HOM05D005414 ORTHO05D006844 9.4e-59 231.1 244 52.0
PSO210G6322 Papaver somniferum HOM05D005414 ORTHO05D006844 9.4e-59 231.1 244 52.0
Zm00001eb385480 Zea mays HOM05D005414 ORTHO05D006844 6.1e-58 228.4 235 47.2
BcaNung07397 Brassica carinata HOM05D005414 ORTHO05D006844 3.0e-57 226.1 245 49.4
BolC5t30882H Brassica oleracea HOM05D005414 ORTHO05D006844 3.0e-57 226.1 245 49.4
C05p21870 Brassica napus HOM05D005414 ORTHO05D006844 6.7e-57 224.9 245 49.0
vmacro21198 Vaccinium macrocarpon HOM05D005414 ORTHO05D006844 8.8e-57 224.6 206 56.3
Carub.0001s2226 Capsella rubella HOM05D005414 ORTHO05D006844 5.7e-56 221.9 249 50.2
Thhalv10008541m.g Eutrema salsugineum HOM05D005414 ORTHO05D006844 7.4e-56 221.5 249 49.0
A09p41990 Brassica napus HOM05D005414 ORTHO05D006844 9.7e-56 221.1 244 49.2
BraA09t39686Z Brassica rapa HOM05D005414 ORTHO05D006844 9.7e-56 221.1 244 49.2
Os06g0581300 Oryza sativa ssp. japonica HOM05D005414 ORTHO05D006844 9.7e-56 221.1 241 46.9
BcaNung07190 Brassica carinata HOM05D005414 ORTHO05D006844 2.8e-55 219.5 243 48.6
Aa31LG7G6700 Aethionema arabicum HOM05D005414 ORTHO05D006844 3.7e-55 219.2 248 49.2
Nn5g28873 Nelumbo nucifera HOM05D005414 ORTHO05D000799 3.7e-55 219.2 201 56.2
Sp1g20260 Schrenkiella parvula HOM05D005414 ORTHO05D006844 4.8e-55 218.8 245 47.8
AL1G36290 Arabidopsis lyrata HOM05D005414 ORTHO05D006844 6.3e-55 218.4 245 48.6
TAR628G0132 Trochodendron aralioides HOM05D005414 ORTHO05D000799 5.3e-54 215.3 197 53.8
MBI04_g42207_MAGBIO Magnolia biondii HOM05D005414 ORTHO05D006844 1.5e-53 213.8 258 45.0
FAN24G1739 Fragaria x ananassa HOM05D005414 ORTHO05D006844 1.1e-51 207.6 252 47.6
Nitab4.5_0001000g0190 Nicotiana tabacum HOM05D005414 ORTHO05D006844 1.1e-51 207.6 237 51.1
TWI60G0913 Tripterygium wilfordii HOM05D005414 ORTHO05D006844 1.1e-51 207.6 207 55.1
CDE05G3275 Ceratophyllum demersum HOM05D005414 ORTHO05D006844 7.2e-51 204.9 231 47.6
Aqoxy5G02011 Aquilegia oxysepala HOM05D005414 ORTHO05D006844 9.4e-51 204.5 195 52.3
AT1G22750 Arabidopsis thaliana HOM05D005414 ORTHO05D006844 9.4e-51 204.5 241 48.1
QL02p036452 Quercus lobata HOM05D005414 ORTHO05D006844 1.6e-50 203.8 225 48.4
CDE05G1245 Ceratophyllum demersum HOM05D005414 ORTHO05D006844 2.7e-50 203.0 216 49.1
CAN.G564.22 Capsicum annuum HOM05D005414 ORTHO05D006844 6.1e-50 201.8 195 51.8
MELO3C030042.2 Cucumis melo HOM05D005414 ORTHO05D006844 1.3e-47 194.1 240 44.2
DCAR_009609 Daucus carota HOM05D005414 ORTHO05D006844 1.3e-47 194.1 181 53.0
Lsat_1_v5_gn_4_170780 Lactuca sativa HOM05D005414 ORTHO05D006844 2.8e-47 193.0 233 47.2
Sed0023257 Sechium edule HOM05D005414 ORTHO05D006844 2.8e-47 193.0 244 44.3
CsaV3_6G004870 Cucumis sativus L. HOM05D005414 ORTHO05D006844 8.2e-47 191.4 250 42.8
Nitab4.5_0007691g0020 Nicotiana tabacum HOM05D005414 ORTHO05D006844 9.1e-46 188.0 237 47.3
CANSAT25G0738 Cannabis sativa HOM05D005414 ORTHO05D006844 1.2e-45 187.6 237 44.3
QL02p036925 Quercus lobata HOM05D005414 ORTHO05D006844 1.0e-44 184.5 294 38.1
Lsat_1_v5_gn_9_42501 Lactuca sativa HOM05D005414 ORTHO05D006844 2.9e-44 183.0 237 44.3
MELO3C019962.2 Cucumis melo HOM05D005414 ORTHO05D006844 6.5e-44 181.8 246 43.5
Sabra02G0050500 Salix brachista HOM05D005414 ORTHO05D006844 1.1e-43 181.0 207 50.7
CsaV3_6G004860 Cucumis sativus L. HOM05D005414 ORTHO05D006844 3.6e-42 176.0 245 41.6
Lsat_1_v5_gn_9_42481 Lactuca sativa HOM05D005414 ORTHO05D006844 2.3e-41 173.3 218 46.3
ClCG08G007190 Citrullus lanatus HOM05D005414 ORTHO05D006844 2.0e-40 170.2 238 42.0
HanXRQChr11g0320131 Helianthus annuus HOM05D005414 ORTHO05D006844 1.3e-39 167.5 235 38.3
Potri.005G198600 Populus trichocarpa HOM05D005414 ORTHO05D006844 1.7e-39 167.2 194 47.9
HanXRQChr11g0320121 Helianthus annuus HOM05D005414 ORTHO05D006844 3.7e-39 166.0 237 39.7
Hund26672 Selenicereus undatus HOM05D005414 ORTHO05D006844 7.0e-38 161.8 180 44.4
HanXRQChr11g0320151 Helianthus annuus HOM05D005414 ORTHO05D006844 4.5e-37 159.1 245 38.0
HanXRQChr07g0196141 Helianthus annuus HOM05D005414 ORTHO05D006844 1.3e-36 157.5 229 41.5
ECA232G3911 Erigeron canadensis HOM05D005414 ORTHO05D006844 2.9e-36 156.4 241 37.8
HanXRQChr11g0320141 Helianthus annuus HOM05D005414 ORTHO05D006844 6.5e-36 155.2 240 37.1
FAN15G1775 Fragaria x ananassa HOM05D005414 ORTHO05D006844 8.0e-34 148.3 271 38.4
HanXRQChr15g0484681 Helianthus annuus HOM05D005414 ORTHO05D006844 2.8e-31 139.8 232 36.2
Sopen04g028200 Solanum pennellii HOM05D005414 ORTHO05D006844 3.7e-31 139.4 127 53.5
HanXRQChr15g0485041 Helianthus annuus HOM05D005414 ORTHO05D006844 1.8e-30 137.1 232 35.3
Lsat_1_v5_gn_1_83841 Lactuca sativa HOM05D005414 ORTHO05D006844 3.1e-30 136.3 232 36.6
SEGI_39181 Sequoiadendron giganteum HOM05D005414 ORTHO05D006844 3.1e-30 136.3 111 59.5
Cpa.g.sc26.122 Carica papaya HOM05D005414 ORTHO05D006844 1.2e-29 134.4 162 43.8
HanXRQChr15g0484961 Helianthus annuus HOM05D005414 ORTHO05D006844 2.0e-29 133.7 231 37.2
HPP92_008789 Vanilla planifolia HOM05D005414 ORTHO05D006844 3.5e-29 132.9 104 65.4
ATR1120G143 Amborella trichopoda HOM05D005414 ORTHO05D006844 3.2e-27 126.3 113 54.9
CARHR023110 Cardamine hirsuta HOM05D005414 ORTHO05D006844 1.2e-26 124.4 152 44.7
Lsat_1_v5_gn_2_41300 Lactuca sativa HOM05D005414 ORTHO05D006844 1.0e-25 121.3 203 38.9
ECA232G0081 Erigeron canadensis HOM05D005414 ORTHO05D006844 1.2e-24 117.9 150 40.7
EL10Ac1g01628 Beta vulgaris HOM05D005414 ORTHO05D006844 2.2e-23 113.6 247 31.2
Pp3c21_15140 Physcomitrium patens HOM05D005414 ORTHO05D006844 8.3e-23 111.7 104 50.0
Lsat_1_v5_gn_1_83961 Lactuca sativa HOM05D005414 ORTHO05D006844 1.0e-20 104.8 205 34.6
SMO331G0045 Selaginella moellendorffii HOM05D005414 ORTHO05D006844 1.3e-20 104.4 103 44.7
AUR62032103 Chenopodium quinoa HOM05D005414 ORTHO05D006844 2.9e-20 103.2 222 32.0
CBR_g58808 Chara braunii HOM05D005414 ORTHO05D006844 1.9e-19 100.5 105 48.6
AagrBONN_evm.TU.Sc2ySwM_228.1176 Anthoceros agrestis HOM05D005414 ORTHO05D006844 9.5e-19 98.2 117 45.3
Mapoly0067s0091 Marchantia polymorpha HOM05D005414 ORTHO05D006844 1.5e-16 90.9 93 46.2
Sed0017348 Sechium edule HOM05D005414 ORTHO05D006844 2.9e-15 86.7 113 43.4
Lsat_1_v5_gn_1_117841 Lactuca sativa HOM05D001315 ORTHO05D004199 1.8e-14 84.0 127 40.2
Lsat_1_v5_gn_1_20800 Lactuca sativa HOM05D000069 ORTHO05D006844 1.8e-14 84.0 127 40.2
TPR.G31416 Trifolium pratense HOM05D005414 ORTHO05D006844 9.2e-14 81.6 106 41.5
AUR62034915 Chenopodium quinoa HOM05D005414 ORTHO05D006844 1.5e-11 74.3 165 30.3
ECA233G0443 Erigeron canadensis HOM05D005414 ORTHO05D006844 2.1e-10 70.5 71 47.9
HanXRQChr11g0320081 Helianthus annuus HOM05D005414 ORTHO05D006844 4.0e-09 66.2 71 43.7
Ah.16g108650 Amaranthus hybridus HOM05D005414 ORTHO05D006844 8.9e-09 65.1 74 44.6
Lsat_1_v5_gn_9_72760 Lactuca sativa HOM05D005414 ORTHO05D006844 2.6e-08 63.5 216 25.5
CAN.G564.24 Capsicum annuum HOM05D005414 ORTHO05D006844 3.7e-07 59.7 110 36.4
Lsat_1_v5_gn_1_83821 Lactuca sativa HOM05D005414 ORTHO05D006844 1.4e-06 57.8 103 35.0
HanXRQChr01g0001821 Helianthus annuus HOM05D005414 ORTHO05D006844 1.9e-06 57.4 119 30.3


User provided reference genes

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