Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 5.3e-81 304.3 153 100.0
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 6.5e-55 217.6 146 72.6
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 8.5e-55 217.2 142 72.5
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 1.2e-53 213.4 142 71.8
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.2e-51 206.8 142 69.0
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 2.6e-51 205.7 142 70.4
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 6.3e-50 201.1 140 68.6
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 1.8e-49 199.5 145 65.5
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 1.8e-49 199.5 145 65.5
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 2.4e-49 199.1 146 64.4
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 7.0e-49 197.6 140 67.1
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 9.1e-49 197.2 146 65.1
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 9.1e-49 197.2 138 67.4
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 1.6e-48 196.4 136 68.4
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 2.0e-48 196.1 136 68.4
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 2.0e-48 196.1 146 65.8
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 2.7e-48 195.7 142 66.2
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 3.5e-48 195.3 140 67.1
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 1.0e-47 193.7 139 66.2
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 1.0e-47 193.7 146 64.4
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 1.0e-47 193.7 142 65.5
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 1.3e-47 193.4 146 61.6
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 1.3e-47 193.4 140 66.4
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 1.7e-47 193.0 141 64.5
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 2.9e-47 192.2 142 64.1
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 3.8e-47 191.8 146 63.0
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 5.0e-47 191.4 142 64.8
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 8.5e-47 190.7 144 64.6
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 8.5e-47 190.7 140 65.7
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 8.5e-47 190.7 143 64.3
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 1.1e-46 190.3 143 64.3
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 1.1e-46 190.3 146 63.7
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 2.5e-46 189.1 141 63.1
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 4.2e-46 188.3 146 60.3
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 5.5e-46 188.0 142 65.5
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 7.2e-46 187.6 141 63.1
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 7.2e-46 187.6 141 62.4
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 7.2e-46 187.6 142 65.5
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 9.4e-46 187.2 144 63.9
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 9.4e-46 187.2 140 65.0
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 9.4e-46 187.2 142 63.4
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 9.4e-46 187.2 146 63.0
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 1.2e-45 186.8 142 64.8
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 2.7e-45 185.7 126 68.3
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 3.6e-45 185.3 134 64.2
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 3.6e-45 185.3 142 64.1
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 3.6e-45 185.3 126 68.3
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 6.1e-45 184.5 135 66.7
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 1.4e-44 183.3 143 64.3
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 1.4e-44 183.3 146 61.0
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 1.4e-44 183.3 146 61.0
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 3.0e-44 182.2 136 64.0
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 6.8e-44 181.0 144 62.5
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 6.8e-44 181.0 142 59.2
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 6.8e-44 181.0 125 68.0
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 8.8e-44 180.6 142 61.3
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 1.5e-43 179.9 142 64.1
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 1.5e-43 179.9 143 62.2
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 2.6e-43 179.1 140 62.1
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 3.4e-43 178.7 144 59.7
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 3.4e-43 178.7 138 63.8
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 5.7e-43 177.9 142 58.5
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 5.7e-43 177.9 144 61.8
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 5.7e-43 177.9 140 62.1
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 7.5e-43 177.6 142 59.9
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 7.5e-43 177.6 142 61.3
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 9.8e-43 177.2 134 62.7
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 9.8e-43 177.2 177 51.4
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 1.3e-42 176.8 140 61.4
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 1.3e-42 176.8 146 58.9
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 1.7e-42 176.4 142 59.2
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 2.8e-42 175.6 136 63.2
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 3.7e-42 175.3 136 62.5
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 3.7e-42 175.3 142 57.7
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 3.7e-42 175.3 125 67.2
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 3.7e-42 175.3 129 65.9
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 6.3e-42 174.5 136 63.2
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 6.3e-42 174.5 132 64.4
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 1.8e-41 172.9 136 61.8
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 3.1e-41 172.2 129 64.3
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 1.6e-40 169.9 142 57.7
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 1.6e-40 169.9 142 57.7
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 1.6e-40 169.9 140 58.6
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 2.0e-40 169.5 142 57.0
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 2.0e-40 169.5 142 57.7
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 2.0e-40 169.5 125 64.0
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 4.5e-40 168.3 142 57.0
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 1.0e-39 167.2 142 56.3
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 1.7e-39 166.4 134 61.9
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 2.3e-39 166.0 125 64.0
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 2.9e-39 165.6 142 58.5
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 1.1e-38 163.7 142 55.6
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 5.6e-38 161.4 129 62.8
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 7.3e-38 161.0 137 57.7
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 1.2e-37 160.2 134 58.2
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 3.6e-37 158.7 129 61.2
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 6.1e-37 157.9 112 69.6
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 6.8e-36 154.5 112 63.4
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 5.7e-35 151.4 142 56.3
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 1.1e-33 147.1 119 60.5
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 1.8e-33 146.4 136 52.2
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 1.8e-33 146.4 141 54.6
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 5.4e-33 144.8 134 56.0
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 1.2e-32 143.7 112 61.6
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 7.3e-30 134.4 123 53.7
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 4.7e-29 131.7 161 47.2
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 1.8e-28 129.8 139 50.4
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 1.8e-28 129.8 126 52.4
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 3.1e-28 129.0 116 55.2
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 1.1e-25 120.6 81 69.1
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 1.9e-25 119.8 108 51.9
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 1.3e-23 113.6 138 48.6
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 1.9e-22 109.8 146 43.2
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 1.9e-22 109.8 80 70.0
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 7.3e-22 107.8 89 57.3
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 1.6e-21 106.7 140 48.6
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 1.8e-20 103.2 131 42.0
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 4.0e-20 102.1 79 60.8
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 1.3e-18 97.1 84 63.1
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 2.8e-13 79.3 51 74.5
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 5.1e-07 58.5 61 50.8
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 5.6e-06 55.1 40 67.5


User provided reference genes

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