Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 2.1e-41 172.2 101 100.0
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 6.3e-30 134.0 99 80.8
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 1.8e-29 132.5 97 82.5
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 1.8e-29 132.5 97 80.4
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 3.4e-28 128.3 100 79.0
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 3.4e-28 128.3 100 80.0
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 4.5e-28 127.9 97 75.3
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 4.5e-28 127.9 98 82.7
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 5.9e-28 127.5 97 76.3
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 7.7e-28 127.1 98 78.6
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 1.7e-27 125.9 97 79.4
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 1.7e-27 125.9 98 80.6
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 2.2e-27 125.6 98 79.6
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 2.2e-27 125.6 98 79.6
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 2.9e-27 125.2 98 80.6
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 3.8e-27 124.8 98 78.6
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 6.5e-27 124.0 98 78.6
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 8.5e-27 123.6 98 77.6
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 8.5e-27 123.6 98 79.6
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 1.1e-26 123.2 98 78.6
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 1.1e-26 123.2 97 70.1
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 1.1e-26 123.2 99 71.7
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 1.1e-26 123.2 97 77.3
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.4e-26 122.9 98 78.6
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 1.4e-26 122.9 98 78.6
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 1.4e-26 122.9 98 78.6
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 1.4e-26 122.9 98 78.6
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 1.4e-26 122.9 98 77.6
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.4e-26 122.9 98 77.6
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 1.4e-26 122.9 96 80.2
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.4e-26 122.9 90 84.4
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 1.9e-26 122.5 98 78.6
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.9e-26 122.5 98 77.6
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 2.5e-26 122.1 98 77.6
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 2.5e-26 122.1 98 77.6
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 3.2e-26 121.7 97 77.3
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 4.2e-26 121.3 98 77.6
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 4.2e-26 121.3 98 77.6
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 4.2e-26 121.3 98 76.5
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 5.5e-26 120.9 98 76.5
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 5.5e-26 120.9 98 72.4
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 7.2e-26 120.6 98 78.6
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 7.2e-26 120.6 100 76.0
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.2e-25 119.8 98 77.6
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 1.2e-25 119.8 98 78.6
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.6e-25 119.4 99 72.7
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.6e-25 119.4 99 72.7
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 1.6e-25 119.4 98 77.6
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.6e-25 119.4 100 74.0
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.1e-25 119.0 93 81.7
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 2.7e-25 118.6 98 75.5
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 2.7e-25 118.6 98 75.5
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.7e-25 118.6 98 71.4
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.7e-25 118.6 98 71.4
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.7e-25 118.6 98 74.5
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 2.7e-25 118.6 90 82.2
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 2.7e-25 118.6 98 75.5
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 3.6e-25 118.2 98 72.4
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 3.6e-25 118.2 97 75.3
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 4.6e-25 117.9 98 72.4
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 4.6e-25 117.9 98 72.4
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 4.6e-25 117.9 95 77.9
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 6.1e-25 117.5 97 77.3
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 7.9e-25 117.1 98 73.5
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 7.9e-25 117.1 87 79.3
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 1.0e-24 116.7 98 74.5
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 1.4e-24 116.3 98 73.5
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 1.4e-24 116.3 97 74.2
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 1.8e-24 115.9 98 72.4
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 1.8e-24 115.9 87 80.5
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 1.8e-24 115.9 90 80.0
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 1.8e-24 115.9 87 75.9
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 2.3e-24 115.5 97 74.2
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 2.3e-24 115.5 93 80.6
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 2.3e-24 115.5 97 72.2
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 2.3e-24 115.5 87 81.6
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 2.3e-24 115.5 87 80.5
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 3.0e-24 115.2 97 71.1
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 3.0e-24 115.2 98 74.5
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 3.0e-24 115.2 98 75.5
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 5.1e-24 114.4 96 74.0
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 5.1e-24 114.4 90 78.9
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 6.7e-24 114.0 97 76.3
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 8.8e-24 113.6 97 69.1
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 8.8e-24 113.6 97 68.0
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.5e-23 112.8 87 80.5
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 2.0e-23 112.5 99 52.5
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 2.5e-23 112.1 97 75.3
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 2.5e-23 112.1 97 76.3
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 7.4e-23 110.5 67 73.1
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 9.7e-23 110.2 86 80.2
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 1.7e-22 109.4 70 64.3
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 2.2e-22 109.0 97 67.0
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 2.2e-22 109.0 97 67.0
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 1.8e-21 105.9 98 69.4
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 2.4e-21 105.5 85 78.8
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 3.4e-20 101.7 87 73.6
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 1.7e-19 99.4 86 73.3
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 1.9e-18 95.9 71 83.1
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.9e-18 95.9 77 77.9
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 3.2e-18 95.1 133 54.1
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 4.2e-18 94.7 81 71.6
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 2.3e-16 89.0 80 72.5
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 3.3e-15 85.1 71 70.4
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 2.7e-09 65.5 43 69.8


User provided reference genes

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