Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11084 Utricularia gibba HOM05D004092 ORTHO05D005448 1.0e-114 416.8 219 100.0
MSTRG.7071 Avicennia marina HOM05D004092 ORTHO05D005448 3.8e-72 275.4 217 67.3
Migut.M01537 Erythranthe guttata HOM05D004092 ORTHO05D005448 7.1e-71 271.2 213 67.1
SGA_v2.0_scaffold186G40203 Striga asiatica HOM05D004092 ORTHO05D005448 1.1e-66 257.3 235 60.9
Actinidia35425 Actinidia chinensis HOM05D004092 ORTHO05D005448 3.1e-66 255.8 214 62.6
Peaxi162Scf00041g01738 Petunia axillaris HOM05D004092 ORTHO05D005448 1.5e-65 253.4 213 62.0
Lju337C5G4 Lonicera japonica HOM05D004092 ORTHO05D005448 2.6e-65 252.7 218 60.6
Hma1.2p1_0334F.1_g128570 Hydrangea macrophylla HOM05D004092 ORTHO05D005448 7.6e-65 251.1 212 61.8
Potri.005G096900 Populus trichocarpa HOM05D004092 ORTHO05D005448 1.3e-64 250.4 212 61.3
SalBow8G5525 Salvia bowleyana HOM05D004092 ORTHO05D005448 1.3e-64 250.4 213 62.9
CSS0013287 Camellia sinensis var. sinensis HOM05D004092 ORTHO05D005448 1.7e-64 250.0 214 59.3
Nitab4.5_0000232g0210 Nicotiana tabacum HOM05D004092 ORTHO05D005448 2.2e-64 249.6 214 62.1
Nitab4.5_0005777g0060 Nicotiana tabacum HOM05D004092 ORTHO05D005448 8.4e-64 247.7 214 62.1
Sabra05G0079500 Salix brachista HOM05D004092 ORTHO05D005448 1.1e-63 247.3 212 60.8
Dinv19600 Davidia involucrata HOM05D004092 ORTHO05D005448 1.4e-63 246.9 214 61.7
vmacro09775 Vaccinium macrocarpon HOM05D004092 ORTHO05D005448 2.5e-63 246.1 214 57.9
Oeu051991.1 Olea europaea HOM05D004092 ORTHO05D005448 4.2e-63 245.4 218 57.8
SalBow6G4089 Salvia bowleyana HOM05D004092 ORTHO05D005448 3.9e-61 238.8 223 59.2
Prupe.4G136600 Prunus persica HOM05D004092 ORTHO05D005448 1.5e-60 236.9 216 57.9
CAN.G851.30 Capsicum annuum HOM05D004092 ORTHO05D005448 2.5e-60 236.1 214 58.9
COL.COLO4_07946 Corchorus olitorius HOM05D004092 ORTHO05D005448 5.7e-60 235.0 214 58.9
SalBow6G0067 Salvia bowleyana HOM05D004092 ORTHO05D005448 7.4e-60 234.6 223 58.7
Solyc04g074090.4 Solanum lycopersicum HOM05D004092 ORTHO05D005448 7.4e-60 234.6 214 59.8
Haze_01709 Corylus avellana HOM05D004092 ORTHO05D005448 9.6e-60 234.2 217 57.6
Haze_01706 Corylus avellana HOM05D004092 ORTHO05D005448 1.3e-59 233.8 215 58.1
Manes.14G011200 Manihot esculenta HOM05D004092 ORTHO05D005448 1.6e-59 233.4 215 57.2
DCAR_026669 Daucus carota HOM05D004092 ORTHO05D005448 2.8e-59 232.6 213 56.3
ClCG09G022650 Citrullus lanatus HOM05D004092 ORTHO05D005448 8.2e-59 231.1 215 59.5
CsaV3_7G022820 Cucumis sativus L. HOM05D004092 ORTHO05D005448 8.2e-59 231.1 215 59.5
Cfa005512 Carpinus fangiana HOM05D004092 ORTHO05D005448 1.4e-58 230.3 215 56.3
MD10G1205100 Malus domestica HOM05D004092 ORTHO05D005448 2.4e-58 229.6 215 57.2
CiPaw.11G063100 Carya illinoinensis HOM05D004092 ORTHO05D005448 5.3e-58 228.4 213 57.7
QL04p079824 Quercus lobata HOM05D004092 ORTHO05D005448 5.3e-58 228.4 214 57.0
QL04p080030 Quercus lobata HOM05D004092 ORTHO05D005448 5.3e-58 228.4 214 57.0
MD05G1223600 Malus domestica HOM05D004092 ORTHO05D005448 6.9e-58 228.0 215 57.2
HanXRQChr11g0335681 Helianthus annuus HOM05D004092 ORTHO05D005448 1.5e-57 226.9 212 55.7
MELO3C012616.2 Cucumis melo HOM05D004092 ORTHO05D005448 2.6e-57 226.1 215 58.6
ECA236G4689 Erigeron canadensis HOM05D004092 ORTHO05D005448 2.6e-57 226.1 213 55.4
Thecc.07G169400 Theobroma cacao HOM05D004092 ORTHO05D005448 3.4e-57 225.7 215 58.1
Eucgr.E01785 Eucalyptus grandis HOM05D004092 ORTHO05D005448 5.9e-57 224.9 214 54.2
Lsat_1_v5_gn_7_110180 Lactuca sativa HOM05D004092 ORTHO05D005448 5.9e-57 224.9 213 56.8
MBI18_g01899_MAGBIO Magnolia biondii HOM05D004092 ORTHO05D005448 5.9e-57 224.9 218 53.7
Atru.chr1.122 Acer truncatum HOM05D004092 ORTHO05D005448 7.6e-57 224.6 211 56.4
CANSAT80G2562 Cannabis sativa HOM05D004092 ORTHO05D005448 7.6e-57 224.6 219 54.8
FAN16G3313 Fragaria x ananassa HOM05D004092 ORTHO05D005448 3.8e-56 222.2 217 55.8
Nn5g27645 Nelumbo nucifera HOM05D004092 ORTHO05D005448 5.0e-56 221.9 214 55.6
Sed0009567 Sechium edule HOM05D004092 ORTHO05D005448 6.5e-56 221.5 215 57.2
Gohir.A13G122400 Gossypium hirsutum HOM05D004092 ORTHO05D005448 8.5e-56 221.1 211 58.3
Gohir.D13G126400 Gossypium hirsutum HOM05D004092 ORTHO05D005448 8.5e-56 221.1 211 57.8
GSVIVG01036806001 Vitis vinifera HOM05D004092 ORTHO05D005448 8.5e-56 221.1 214 55.1
TAR362G1264 Trochodendron aralioides HOM05D004092 ORTHO05D005448 1.1e-55 220.7 214 53.3
Ciclev10004308m.g Citrus clementina HOM05D004092 ORTHO05D005448 1.4e-55 220.3 211 54.5
FvH4_3g15370 Fragaria vesca HOM05D004092 ORTHO05D005448 1.4e-55 220.3 217 56.2
FAN11G0738 Fragaria x ananassa HOM05D004092 ORTHO05D005448 1.4e-55 220.3 217 56.2
FAN25G1415 Fragaria x ananassa HOM05D004092 ORTHO05D005448 1.9e-55 219.9 217 56.2
CAN.G101.16 Capsicum annuum HOM05D004092 ORTHO05D005448 2.5e-55 219.5 197 60.9
Cpa.g.sc4.30 Carica papaya HOM05D004092 ORTHO05D005448 2.5e-55 219.5 215 57.2
TWI38G0748 Tripterygium wilfordii HOM05D004092 ORTHO05D005448 3.2e-55 219.2 212 54.2
AUR62016815 Chenopodium quinoa HOM05D004092 ORTHO05D005448 5.5e-55 218.4 215 54.4
AUR62026892 Chenopodium quinoa HOM05D004092 ORTHO05D005448 7.2e-55 218.0 224 54.5
RcHm_v2.0_Chr5g0025821 Rosa chinensis HOM05D004092 ORTHO05D005448 7.2e-55 218.0 209 56.9
Ca_07696_v3 Cicer arietinum L. HOM05D004092 ORTHO05D005448 9.3e-55 217.6 215 52.6
Glyma.10G245700 Glycine max HOM05D004092 ORTHO05D005448 9.3e-55 217.6 216 54.6
Cc05_g16260 Coffea canephora HOM05D004092 ORTHO05D005448 1.6e-54 216.9 211 55.5
Gorai.013G141600 Gossypium raimondii HOM05D004092 ORTHO05D005448 1.6e-54 216.9 211 57.3
Lj1g0019540 Lotus japonicus HOM05D004092 ORTHO05D005448 3.6e-54 215.7 216 54.2
arahy.Tifrunner.gnm1.ann1.R5WWIH Arachis hypogaea HOM05D004092 ORTHO05D005448 4.6e-54 215.3 216 53.2
Lalb_Chr03g0031641 Lupinus albus HOM05D004092 ORTHO05D005448 6.1e-54 214.9 211 53.1
Glyma.12G070100 Glycine max HOM05D004092 ORTHO05D005448 2.3e-53 213.0 216 53.7
Lalb_Chr01g0007101 Lupinus albus HOM05D004092 ORTHO05D005448 2.3e-53 213.0 215 53.0
Duzib213G0752 Durio zibethinus HOM05D004092 ORTHO05D005448 3.0e-53 212.6 215 55.8
arahy.Tifrunner.gnm1.ann1.7JS6EV Arachis hypogaea HOM05D004092 ORTHO05D005448 5.1e-53 211.8 216 52.8
Sc08g0008610 Simmondsia chinensis HOM05D004092 ORTHO05D005448 1.5e-52 210.3 212 56.1
Phvul.011G076150 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 3.7e-51 205.7 217 53.9
Medtr7g070240 Medicago truncatula HOM05D004092 ORTHO05D005448 8.2e-51 204.5 215 51.2
ATR0763G063 Amborella trichopoda HOM05D004092 ORTHO05D005448 1.1e-50 204.1 218 51.4
Phvul.L001854 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 1.1e-50 204.1 217 53.9
Phvul.L001940 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 1.1e-50 204.1 217 53.9
THA.LOC104808127 Tarenaya hassleriana HOM05D004092 ORTHO05D005448 2.4e-50 203.0 217 51.6
VMungo1127G2087 Vigna mungo HOM05D004092 ORTHO05D005448 2.4e-50 203.0 216 53.2
CDE01G0334 Ceratophyllum demersum HOM05D004092 ORTHO05D005448 1.2e-49 200.7 214 50.9
PGR044G0523 Punica granatum HOM05D004092 ORTHO05D005448 1.2e-49 200.7 208 54.8
Aqoxy3G03661 Aquilegia oxysepala HOM05D004092 ORTHO05D005448 7.7e-49 198.0 218 50.9
AT1G79150 Arabidopsis thaliana HOM05D004092 ORTHO05D005448 2.2e-48 196.4 214 50.9
TPR.G6646 Trifolium pratense HOM05D004092 ORTHO05D005448 2.9e-48 196.1 219 48.4
PSO063G0010 Papaver somniferum HOM05D004092 ORTHO05D005448 5.0e-48 195.3 216 48.6
BcaC08g47477 Brassica carinata HOM05D004092 ORTHO05D005448 2.5e-47 193.0 203 52.2
A07p44270 Brassica napus HOM05D004092 ORTHO05D005448 2.5e-47 193.0 203 52.2
C06p53020 Brassica napus HOM05D004092 ORTHO05D005448 2.5e-47 193.0 203 52.2
BraA07t31936Z Brassica rapa HOM05D004092 ORTHO05D005448 2.5e-47 193.0 203 52.2
EL10Ac2g03277 Beta vulgaris HOM05D004092 ORTHO05D005448 3.2e-47 192.6 229 50.7
BolC6t40319H Brassica oleracea HOM05D004092 ORTHO05D005448 4.2e-47 192.2 195 52.8
Carub.0002s2602 Capsella rubella HOM05D004092 ORTHO05D005448 4.2e-47 192.2 197 53.3
Aa31LG4G1850 Aethionema arabicum HOM05D004092 ORTHO05D005448 9.4e-47 191.0 213 50.7
PSO782G4649 Papaver somniferum HOM05D004092 ORTHO05D005448 9.4e-47 191.0 216 48.6
Sp5g34210 Schrenkiella parvula HOM05D004092 ORTHO05D005448 9.4e-47 191.0 193 52.8
Psat3g124440 Pisum sativum HOM05D004092 ORTHO05D005448 3.6e-46 189.1 203 49.3
BcaNung04898 Brassica carinata HOM05D004092 ORTHO05D005448 4.6e-46 188.7 145 66.2
HPP92_004307 Vanilla planifolia HOM05D004092 ORTHO05D005448 2.3e-45 186.4 213 48.4
AL2G39620 Arabidopsis lyrata HOM05D004092 ORTHO05D005448 3.0e-45 186.0 214 50.5
BcaB02g08669 Brassica carinata HOM05D004092 ORTHO05D005448 3.0e-45 186.0 214 50.9
SEGI_30171 Sequoiadendron giganteum HOM05D004092 ORTHO05D005448 3.9e-45 185.7 214 49.5
CARHR072800 Cardamine hirsuta HOM05D004092 ORTHO05D005448 6.7e-45 184.9 215 48.8
Zm00001eb020130 Zea mays HOM05D004092 ORTHO05D005448 7.4e-44 181.4 219 46.6
Phvul.011G073301 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 1.0e-40 171.0 198 50.0
Os06g0498500 Oryza sativa ssp. japonica HOM05D004092 ORTHO05D005448 5.0e-40 168.7 208 46.2
SHI21022 Sapria himalayana HOM05D004092 ORTHO05D005448 3.3e-36 156.0 143 57.3
AagrBONN_evm.TU.Sc2ySwM_117.3368 Anthoceros agrestis HOM05D004092 ORTHO05D005448 1.2e-33 147.5 219 40.6
Sopen00g012990 Solanum pennellii HOM05D004092 ORTHO05D005448 2.0e-33 146.7 156 51.9
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.0e-32 144.4 210 43.8
Pp3c3_9760 Physcomitrium patens HOM05D004092 ORTHO05D005448 3.3e-28 129.4 225 37.8
Mapoly0001s0281 Marchantia polymorpha HOM05D004092 ORTHO05D005448 9.1e-26 121.3 188 43.1
SMO169G0313 Selaginella moellendorffii HOM05D004092 ORTHO05D005448 9.4e-23 111.3 222 35.1
CBR_g30814 Chara braunii HOM05D004092 ORTHO05D005448 3.0e-21 106.3 103 53.4
Psat1g207400 Pisum sativum HOM05D004092 ORTHO05D005448 1.7e-19 100.5 102 52.9
Sopen00g013080 Solanum pennellii HOM05D004092 ORTHO05D005448 1.6e-17 94.0 58 82.8
Thhalv10018125m.g Eutrema salsugineum HOM05D004092 ORTHO05D005448 3.8e-16 89.4 58 74.1
Cre16.g659600 Chlamydomonas reinhardtii HOM05D004092 ORTHO05D005448 5.9e-09 65.5 106 39.6
MCO10G157 Micromonas commoda HOM05D004092 ORTHO05D005448 2.9e-08 63.2 213 28.6


User provided reference genes

Program Settings