Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11014 Utricularia gibba HOM05D007101 ORTHO05D008632 7.3e-242 840.1 416 100.0
SalBow1G7566 Salvia bowleyana HOM05D007101 ORTHO05D008632 1.5e-48 198.0 185 51.4
Migut.B00010 Erythranthe guttata HOM05D007101 ORTHO05D008632 2.6e-45 187.2 185 48.1
MSTRG.17820 Avicennia marina HOM05D007101 ORTHO05D008632 1.3e-41 174.9 179 46.4
SGA_v2.0_scaffold32G13346 Striga asiatica HOM05D007101 ORTHO05D008632 2.3e-41 174.1 186 47.8
Rhsim01G0003500 Rhododendron simsii HOM05D007101 ORTHO05D008632 2.0e-37 161.0 185 47.0
Oeu059796.1 Olea europaea HOM05D007101 ORTHO05D008632 9.8e-37 158.7 181 45.3
Dinv41876 Davidia involucrata HOM05D007101 ORTHO05D008632 6.3e-36 156.0 192 42.7
GSVIVG01023885001 Vitis vinifera HOM05D007101 ORTHO05D008632 1.1e-35 155.2 185 44.3
CAN.G157.9 Capsicum annuum HOM05D007101 ORTHO05D008632 1.4e-35 154.8 179 45.8
Cc03_g11620 Coffea canephora HOM05D007101 ORTHO05D008632 4.1e-35 153.3 264 35.2
CSS0049741 Camellia sinensis var. sinensis HOM05D007101 ORTHO05D008632 9.2e-35 152.1 187 44.4
TAR376G1071 Trochodendron aralioides HOM05D007101 ORTHO05D008632 1.2e-34 151.8 187 42.8
Actinidia17999 Actinidia chinensis HOM05D007101 ORTHO05D008632 7.8e-34 149.1 182 43.4
TAR629G2938 Trochodendron aralioides HOM05D007101 ORTHO05D008632 2.3e-33 147.5 189 42.3
Prupe.8G178500 Prunus persica HOM05D007101 ORTHO05D008632 3.8e-33 146.7 185 42.2
TWI15G0633 Tripterygium wilfordii HOM05D007101 ORTHO05D008632 3.8e-33 146.7 182 44.5
Peaxi162Scf00818g00019 Petunia axillaris HOM05D007101 ORTHO05D008632 8.6e-33 145.6 180 43.3
CiPaw.06G116300 Carya illinoinensis HOM05D007101 ORTHO05D008632 1.5e-32 144.8 184 42.9
Hund06163 Selenicereus undatus HOM05D007101 ORTHO05D008632 1.5e-32 144.8 172 41.9
PGSC0003DMG400019836 Solanum tuberosum HOM05D007101 ORTHO05D008632 1.5e-32 144.8 173 44.5
RcHm_v2.0_Chr6g0280761 Rosa chinensis HOM05D007101 ORTHO05D008632 1.9e-32 144.4 179 41.3
MD10G1139700 Malus domestica HOM05D007101 ORTHO05D008632 2.5e-32 144.1 189 40.7
Solyc02g021020.4 Solanum lycopersicum HOM05D007101 ORTHO05D008632 4.3e-32 143.3 173 45.1
Sopen02g005320 Solanum pennellii HOM05D007101 ORTHO05D008632 4.3e-32 143.3 173 45.1
COL.COLO4_17930 Corchorus olitorius HOM05D007101 ORTHO05D008632 7.3e-32 142.5 186 42.5
vmacro02332 Vaccinium macrocarpon HOM05D007101 ORTHO05D008632 9.5e-32 142.1 199 40.2
Haze_02013 Corylus avellana HOM05D007101 ORTHO05D008632 1.6e-31 141.4 184 40.8
Duzib132G1059 Durio zibethinus HOM05D007101 ORTHO05D008632 2.1e-31 141.0 184 41.8
Cpa.g.sc20.207 Carica papaya HOM05D007101 ORTHO05D008632 2.8e-31 140.6 172 42.4
Glyma.08G060600 Glycine max HOM05D007101 ORTHO05D008632 2.8e-31 140.6 190 40.5
Sed0027220 Sechium edule HOM05D007101 ORTHO05D008632 3.6e-31 140.2 187 40.1
QL11p055950 Quercus lobata HOM05D007101 ORTHO05D008632 6.1e-31 139.4 187 41.7
C07p06350 Brassica napus HOM05D007101 ORTHO05D008632 1.0e-30 138.7 197 37.6
Thhalv10022542m.g Eutrema salsugineum HOM05D007101 ORTHO05D008632 1.8e-30 137.9 197 37.6
Potri.004G205600 Populus trichocarpa HOM05D007101 ORTHO05D008632 1.8e-30 137.9 184 40.2
MELO3C013256.2 Cucumis melo HOM05D007101 ORTHO05D008632 4.0e-30 136.7 190 41.1
CsaV3_7G001820 Cucumis sativus L. HOM05D007101 ORTHO05D008632 4.0e-30 136.7 190 42.6
FAN15G1235 Fragaria x ananassa HOM05D007101 ORTHO05D008632 4.0e-30 136.7 179 39.7
Cfa005353 Carpinus fangiana HOM05D007101 ORTHO05D008632 5.2e-30 136.3 184 39.7
Manes.11G110800 Manihot esculenta HOM05D007101 ORTHO05D008632 5.2e-30 136.3 175 40.6
Sabra04G0138800 Salix brachista HOM05D007101 ORTHO05D008632 5.2e-30 136.3 184 39.1
arahy.Tifrunner.gnm1.ann1.RR3D2P Arachis hypogaea HOM05D007101 ORTHO05D008632 8.9e-30 135.6 183 37.7
ClCG02G003480 Citrullus lanatus HOM05D007101 ORTHO05D008632 1.2e-29 135.2 187 41.7
FvH4_2g16640 Fragaria vesca HOM05D007101 ORTHO05D008632 1.2e-29 135.2 177 39.5
BcaB03g16462 Brassica carinata HOM05D007101 ORTHO05D008632 1.5e-29 134.8 189 37.6
AL3G49990 Arabidopsis lyrata HOM05D007101 ORTHO05D008632 2.0e-29 134.4 197 36.5
VMungo0251G0107 Vigna mungo HOM05D007101 ORTHO05D008632 7.5e-29 132.5 185 38.4
Ah.01g023750 Amaranthus hybridus HOM05D000564 ORTHO05D002780 1.3e-28 131.7 169 39.6
arahy.Tifrunner.gnm1.ann1.RGU3X9 Arachis hypogaea HOM05D007101 ORTHO05D008632 1.3e-28 131.7 183 36.6
EL10Ac9g21242 Beta vulgaris HOM05D007101 ORTHO05D008632 1.3e-28 131.7 169 41.4
PGR142G0716 Punica granatum HOM05D007101 ORTHO05D008632 1.7e-28 131.3 179 40.8
Aqoxy6G01656 Aquilegia oxysepala HOM05D007101 ORTHO05D008632 2.2e-28 131.0 185 37.8
BolC7t41051H Brassica oleracea HOM05D007101 ORTHO05D008632 3.7e-28 130.2 199 35.7
Aa31LG8G14540 Aethionema arabicum HOM05D007101 ORTHO05D008632 4.9e-28 129.8 197 35.5
Phvul.002G220400 Phaseolus vulgaris HOM05D007101 ORTHO05D008632 4.9e-28 129.8 186 37.6
TPR.G15380 Trifolium pratense HOM05D007101 ORTHO05D008632 4.9e-28 129.8 171 39.2
arahy.Tifrunner.gnm1.ann1.X169V3 Arachis hypogaea HOM05D007101 ORTHO05D008632 6.4e-28 129.4 176 36.9
BcaC06g36224 Brassica carinata HOM05D007101 ORTHO05D008632 6.4e-28 129.4 197 35.5
A07p03990 Brassica napus HOM05D007101 ORTHO05D008632 6.4e-28 129.4 197 35.5
BraA07t28190Z Brassica rapa HOM05D007101 ORTHO05D008632 6.4e-28 129.4 197 35.5
THA.LOC104819686 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 1.1e-27 128.6 188 38.8
HanXRQChr12g0374451 Helianthus annuus HOM05D007101 ORTHO05D008632 1.8e-27 127.9 172 38.4
Lj4g0005302 Lotus japonicus HOM05D007101 ORTHO05D008632 3.2e-27 127.1 183 36.1
Ciclev10027787m.g Citrus clementina HOM05D007101 ORTHO05D008632 5.4e-27 126.3 198 37.4
Ca_18469_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 9.2e-27 125.6 175 37.7
Ca_30070_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 9.2e-27 125.6 175 37.7
Lalb_Chr05g0218081 Lupinus albus HOM05D007101 ORTHO05D008632 1.6e-26 124.8 177 36.2
CARHR293460 Cardamine hirsuta HOM05D007101 ORTHO05D008632 2.0e-26 124.4 185 37.3
Sc14g0002450 Simmondsia chinensis HOM05D007101 ORTHO05D008632 3.5e-26 123.6 170 37.6
AUR62027126 Chenopodium quinoa HOM05D007101 ORTHO05D008632 7.8e-26 122.5 169 38.5
Lsat_1_v5_gn_8_121281 Lactuca sativa HOM05D007101 ORTHO05D008632 3.0e-25 120.6 172 36.6
AUR62012916 Chenopodium quinoa HOM05D007101 ORTHO05D008632 3.9e-25 120.2 169 37.3
ECA233G4336 Erigeron canadensis HOM05D000046 ORTHO05D014757 1.9e-24 117.9 171 37.4
Nitab4.5_0000526g0060 Nicotiana tabacum HOM05D007101 ORTHO05D008632 1.9e-24 117.9 154 42.2
Nitab4.5_0006710g0010 Nicotiana tabacum HOM05D007101 ORTHO05D008632 1.2e-23 115.2 154 41.6
AT2G17140 Arabidopsis thaliana HOM05D007101 ORTHO05D008632 2.8e-23 114.0 189 32.8
Eucgr.I01520 Eucalyptus grandis HOM05D007101 ORTHO05D008632 8.9e-22 109.0 185 33.5
Medtr4g091600 Medicago truncatula HOM05D007101 ORTHO05D008632 7.5e-21 105.9 198 32.8
Rhsim11G0197400 Rhododendron simsii HOM05D007101 ORTHO05D008632 3.5e-18 97.1 219 32.4
Os02g0132100 Oryza sativa ssp. japonica HOM05D007101 ORTHO05D008632 1.0e-17 95.5 176 30.7
Lj9A406T59 Lonicera japonica HOM05D007101 ORTHO05D008632 5.0e-17 93.2 172 31.4
SHI10554 Sapria himalayana HOM05D007101 ORTHO05D008632 5.0e-17 93.2 148 35.8
Atru.chr5.3546 Acer truncatum HOM05D007101 ORTHO05D008632 6.6e-17 92.8 104 46.2
Zm00001eb209030 Zea mays HOM05D007101 ORTHO05D008632 8.6e-17 92.4 193 31.6
Gohir.D04G170700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 1.5e-16 91.7 176 32.4
DCAR_015659 Daucus carota HOM05D000046 ORTHO05D008632 1.9e-16 91.3 190 32.6
Gorai.012G159300 Gossypium raimondii HOM05D007101 ORTHO05D008632 1.9e-16 91.3 176 32.4
Thecc.02G044400 Theobroma cacao HOM05D007101 ORTHO05D008632 5.6e-16 89.7 187 31.6
Gohir.A04G125700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 8.1e-15 85.9 176 31.2
PSO675G0367 Papaver somniferum HOM05D007101 ORTHO05D008632 9.9e-13 79.0 183 27.9
Nn1g05331 Nelumbo nucifera HOM05D007101 ORTHO05D008632 1.3e-12 78.6 180 29.4
Carub.0003s3107 Capsella rubella HOM05D007101 ORTHO05D008632 6.4e-12 76.3 189 25.9
HPP92_025842 Vanilla planifolia HOM05D007101 ORTHO05D008632 3.0e-09 67.4 196 24.0
THA.LOC104807397 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 8.6e-09 65.9 123 35.8
Glyma.07G188700 Glycine max HOM05D007101 ORTHO05D008632 1.9e-08 64.7 176 28.4
FAN24G2347 Fragaria x ananassa HOM05D007101 ORTHO05D008632 3.3e-08 63.9 85 40.0
Sp3g30480 Schrenkiella parvula HOM05D007101 ORTHO05D008632 1.6e-07 61.6 64 45.3
Gorai.008G096400 Gossypium raimondii HOM05D007101 ORTHO05D008632 2.8e-07 60.8 68 41.2
MBI06_g35039_MAGBIO Magnolia biondii HOM05D007101 ORTHO05D008632 6.8e-06 56.2 59 44.1


User provided reference genes

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